RNA–Protein interactions for RNA: ENST00000429801.5

NUP98-207, Transcript of nucleoporin 98, humanhuman

TSL 1 (best)

Gene NUP98, Length 2,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-207ENST00000429801 MAPK8IP3Q9UPT6 1336 aa11.24□□□□□ -0.61
NUP98-207ENST00000429801 HMOX1P09601 288 aa11.24□□□□□ -0.61
NUP98-207ENST00000429801 LTV1Q96GA3 475 aaPredicted RBP11.24□□□□□ -0.61
NUP98-207ENST00000429801 RRAGDQ9NQL2 400 aaPredicted RBP11.24□□□□□ -0.61
NUP98-207ENST00000429801 LAS1LQ9Y4W2 734 aaKnown RBP11.24□□□□□ -0.61
NUP98-207ENST00000429801 APAF1O14727 1248 aa11.24□□□□□ -0.61
NUP98-207ENST00000429801 ZNF830Q96NB3 372 aaPredicted RBP11.24□□□□□ -0.61
NUP98-207ENST00000429801 PLEKHF1Q96S99 279 aa11.24□□□□□ -0.61
NUP98-207ENST00000429801 PRDM11Q9NQV5 511 aa11.24□□□□□ -0.61
NUP98-207ENST00000429801 ZBTB47Q9UFB7 747 aaPredicted RBP11.24□□□□□ -0.61
NUP98-207ENST00000429801 ABCA3Q99758 1704 aa11.23□□□□□ -0.61
NUP98-207ENST00000429801 SULT6B1Q6IMI4 303 aa11.23□□□□□ -0.61
NUP98-207ENST00000429801 EYA1Q99502 592 aa11.23□□□□□ -0.61
NUP98-207ENST00000429801 IGSF1Q8N6C5 1336 aa11.23□□□□□ -0.61
NUP98-207ENST00000429801 RGPD1P0DJD0 1748 aa11.23□□□□□ -0.61
NUP98-207ENST00000429801 PRKAR2BP31323 418 aa11.23□□□□□ -0.61
NUP98-207ENST00000429801 GSE1Q14687 1217 aa11.23□□□□□ -0.61
NUP98-207ENST00000429801 ANKRD24Q8TF21 1146 aa11.23□□□□□ -0.61
NUP98-207ENST00000429801 FBXO3Q9UK99 471 aa11.23□□□□□ -0.61
NUP98-207ENST00000429801 AXIN2Q9Y2T1 843 aa11.23□□□□□ -0.61
NUP98-207ENST00000429801 TCP11L2Q8N4U5 519 aa11.22□□□□□ -0.61
NUP98-207ENST00000429801 CHRNA2Q15822 529 aa11.22□□□□□ -0.61
NUP98-207ENST00000429801 FTSJ3Q8IY81 847 aaKnown RBP11.22□□□□□ -0.61
NUP98-207ENST00000429801 USP35Q9P2H5 1018 aa11.22□□□□□ -0.61
NUP98-207ENST00000429801 SENP3-EIF4A1A0A087X0R7 540 aa11.21□□□□□ -0.61
NUP98-207ENST00000429801 ERBB3P21860 1342 aa11.21□□□□□ -0.61
NUP98-207ENST00000429801 KDRP35968 1356 aa11.21□□□□□ -0.61
NUP98-207ENST00000429801 COL18A1P39060 1754 aa11.21□□□□□ -0.62
NUP98-207ENST00000429801 TEX2Q8IWB9 1127 aa11.2□□□□□ -0.62
NUP98-207ENST00000429801 JCADQ9P266 1359 aa11.2□□□□□ -0.62
NUP98-207ENST00000429801 NBPF6Q5VWK0 638 aa11.2□□□□□ -0.62
NUP98-207ENST00000429801 AEBP1Q8IUX7 1158 aa11.2□□□□□ -0.62
NUP98-207ENST00000429801 NBPF4Q96M43 638 aa11.2□□□□□ -0.62
NUP98-207ENST00000429801 VGLL3A8MV65 326 aa11.19□□□□□ -0.62
NUP98-207ENST00000429801 CSB-PGBD3P0DP91 1061 aa11.19□□□□□ -0.62
NUP98-207ENST00000429801 PDE3BQ13370 1112 aa11.19□□□□□ -0.62
NUP98-207ENST00000429801 CNKSR2Q8WXI2 1034 aa11.19□□□□□ -0.62
NUP98-207ENST00000429801 CHRM1P11229 460 aaPredicted RBP11.19□□□□□ -0.62
NUP98-207ENST00000429801 FRAT1Q92837 279 aaPredicted RBP11.19□□□□□ -0.62
NUP98-207ENST00000429801 FAM83GA6ND36 823 aa11.18□□□□□ -0.62
NUP98-207ENST00000429801 TMPOP42166 694 aaKnown RBP11.18□□□□□ -0.62
NUP98-207ENST00000429801 NEUROD2Q15784 382 aa11.18□□□□□ -0.62
NUP98-207ENST00000429801 CCDC27Q2M243 656 aa11.18□□□□□ -0.62
NUP98-207ENST00000429801 KCNG1Q9UIX4 513 aa11.18□□□□□ -0.62
NUP98-207ENST00000429801 RGPD5Q99666 1765 aa11.18□□□□□ -0.62
NUP98-207ENST00000429801 PHACTR3Q96KR7 559 aa11.18□□□□□ -0.62
NUP98-207ENST00000429801 LMO7Q8WWI1 1683 aa11.18□□□□□ -0.62
NUP98-207ENST00000429801 NFE2L2Q16236 605 aa11.17□□□□□ -0.62
NUP98-207ENST00000429801 NLRP2Q9NX02 1062 aa11.17□□□□□ -0.62
NUP98-207ENST00000429801 RRP7AQ9Y3A4 280 aaKnown RBP11.17□□□□□ -0.62
NUP98-207ENST00000429801 FAM208AQ9UK61 1670 aaKnown RBP11.17□□□□□ -0.62
NUP98-207ENST00000429801 CAMTA1Q9Y6Y1 1673 aa11.17□□□□□ -0.62
NUP98-207ENST00000429801 NPM3O75607 178 aaKnown RBP11.17□□□□□ -0.62
NUP98-207ENST00000429801 HSPA1LP34931 641 aa11.17□□□□□ -0.62
NUP98-207ENST00000429801 RIPK4P57078 832 aa11.17□□□□□ -0.62
NUP98-207ENST00000429801 EVA1CP58658 441 aa11.17□□□□□ -0.62
NUP98-207ENST00000429801 USHBP1Q8N6Y0 703 aa11.17□□□□□ -0.62
NUP98-207ENST00000429801 NCAPD2Q15021 1401 aa11.17□□□□□ -0.62
NUP98-207ENST00000429801 COL14A1Q05707 1796 aaKnown RBP11.17□□□□□ -0.62
NUP98-207ENST00000429801 SPATA31A6Q5VVP1 1343 aa11.17□□□□□ -0.62
NUP98-207ENST00000429801 WDR17Q8IZU2 1322 aa11.17□□□□□ -0.62
NUP98-207ENST00000429801 ZNF521Q96K83 1311 aa11.17□□□□□ -0.62
NUP98-207ENST00000429801 COL5A2P05997 1499 aaPredicted RBP11.17□□□□□ -0.62
NUP98-207ENST00000429801 NUTM2BA6NNL0 878 aaPredicted RBP11.16□□□□□ -0.62
NUP98-207ENST00000429801 NUTM2EB1AL46 878 aaPredicted RBP11.16□□□□□ -0.62
NUP98-207ENST00000429801 NUTM2AQ8IVF1 878 aaPredicted RBP11.16□□□□□ -0.62
NUP98-207ENST00000429801 WWC1Q8IX03 1113 aa11.16□□□□□ -0.62
NUP98-207ENST00000429801 ADAMTS2O95450 1211 aa11.16□□□□□ -0.62
NUP98-207ENST00000429801 CNPY4Q8N129 248 aa11.16□□□□□ -0.62
NUP98-207ENST00000429801 BTG4Q9NY30 223 aa11.16□□□□□ -0.62
NUP98-207ENST00000429801 ANP32AP39687 249 aaKnown RBP11.15□□□□□ -0.62
NUP98-207ENST00000429801 GOLGA2Q08379 1002 aa11.15□□□□□ -0.62
NUP98-207ENST00000429801 LMOD3Q0VAK6 560 aa11.15□□□□□ -0.62
NUP98-207ENST00000429801 TOM1L2Q6ZVM7 507 aa11.15□□□□□ -0.62
NUP98-207ENST00000429801 WDR63Q8IWG1 891 aa11.15□□□□□ -0.62
NUP98-207ENST00000429801 GAS2L2Q8NHY3 880 aa11.15□□□□□ -0.62
NUP98-207ENST00000429801 RGPD2P0DJD1 1756 aa11.15□□□□□ -0.63
NUP98-207ENST00000429801 STRN4Q9NRL3 753 aa11.14□□□□□ -0.63
NUP98-207ENST00000429801 ZHX1Q9UKY1 873 aaPredicted RBP11.14□□□□□ -0.63
NUP98-207ENST00000429801 RAPGEF4Q8WZA2 1011 aa11.14□□□□□ -0.63
NUP98-207ENST00000429801 TMEM51Q9NW97 253 aa11.14□□□□□ -0.63
NUP98-207ENST00000429801 PLEKHG2Q9H7P9 1386 aa11.13□□□□□ -0.63
NUP98-207ENST00000429801 MTHFSDQ2M296 383 aaKnown RBP11.13□□□□□ -0.63
NUP98-207ENST00000429801 AMOTQ4VCS5 1084 aa11.13□□□□□ -0.63
NUP98-207ENST00000429801 RNF216Q9NWF9 866 aaPredicted RBP11.13□□□□□ -0.63
NUP98-207ENST00000429801 TRIM35Q9UPQ4 493 aa11.13□□□□□ -0.63
NUP98-207ENST00000429801 PLEKHO1Q53GL0 409 aaPredicted RBP11.13□□□□□ -0.63
NUP98-207ENST00000429801 CARD10Q9BWT7 1032 aa11.13□□□□□ -0.63
NUP98-207ENST00000429801 E9PSI1 815 aa11.12□□□□□ -0.63
NUP98-207ENST00000429801 TATP17735 454 aaPredicted RBP11.12□□□□□ -0.63
NUP98-207ENST00000429801 LARP1Q6PKG0 1096 aaKnown RBP11.12□□□□□ -0.63
NUP98-207ENST00000429801 CDCA7LQ96GN5 454 aa11.12□□□□□ -0.63
NUP98-207ENST00000429801 CRB1P82279 1406 aa11.12□□□□□ -0.63
NUP98-207ENST00000429801 BCCIPQ9P287 314 aaKnown RBP eCLIP11.11□□□□□ -0.63
NUP98-207ENST00000429801 HTATSF1O43719 755 aaKnown RBP11.11□□□□□ -0.63
NUP98-207ENST00000429801 SLFN5Q08AF3 891 aa11.11□□□□□ -0.63
NUP98-207ENST00000429801 RTF1Q92541 710 aaKnown RBP11.11□□□□□ -0.63
NUP98-207ENST00000429801 PLCH1Q4KWH8 1693 aa11.11□□□□□ -0.63
NUP98-207ENST00000429801 IL16Q14005 1332 aa11.11□□□□□ -0.63
NUP98-207ENST00000429801 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.1□□□□□ -0.638e-7■□□□□ 8.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms