RNA–Protein interactions for RNA: ENST00000428088.1

AL954642.1-201, humanhuman

TSL 3 BASIC

Gene AL954642.1, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL954642.1-201ENST00000428088 SHANK3Q9BYB0 1731 aa26.36■■□□□ 1.81
AL954642.1-201ENST00000428088 KIF24Q5T7B8 1368 aa26.36■■□□□ 1.81
AL954642.1-201ENST00000428088 PPM1GO15355 546 aaPredicted RBP26.35■■□□□ 1.81
AL954642.1-201ENST00000428088 RAPGEF4Q8WZA2 1011 aa26.33■■□□□ 1.81
AL954642.1-201ENST00000428088 PDGFDQ9GZP0 370 aaPredicted RBP26.33■■□□□ 1.81
AL954642.1-201ENST00000428088 SPON1Q9HCB6 807 aa26.33■■□□□ 1.81
AL954642.1-201ENST00000428088 STK32BQ9NY57 414 aa26.33■■□□□ 1.81
AL954642.1-201ENST00000428088 SYTL4Q96C24 671 aaPredicted RBP26.32■■□□□ 1.8
AL954642.1-201ENST00000428088 PANK3Q9H999 370 aa26.32■■□□□ 1.8
AL954642.1-201ENST00000428088 CASZ1Q86V15 1759 aa26.31■■□□□ 1.8
AL954642.1-201ENST00000428088 TATP17735 454 aaPredicted RBP26.31■■□□□ 1.8
AL954642.1-201ENST00000428088 PRIM1P49642 420 aaKnown RBP26.31■■□□□ 1.8
AL954642.1-201ENST00000428088 SLC15A2Q16348 729 aa26.31■■□□□ 1.8
AL954642.1-201ENST00000428088 DOT1LQ8TEK3 1739 aa26.31■■□□□ 1.8
AL954642.1-201ENST00000428088 ANKRD26Q9UPS8 1709 aa26.29■■□□□ 1.8
AL954642.1-201ENST00000428088 TNNT2P45379 298 aaPredicted RBP26.29■■□□□ 1.8
AL954642.1-201ENST00000428088 POLKQ9UBT6 870 aa26.28■■□□□ 1.8
AL954642.1-201ENST00000428088 WASHC2AQ641Q2 1341 aa26.28■■□□□ 1.8
AL954642.1-201ENST00000428088 LRRC4BQ9NT99 713 aa26.27■■□□□ 1.8
AL954642.1-201ENST00000428088 PPP1R1BQ9UD71 204 aaPredicted RBP26.26■■□□□ 1.79
AL954642.1-201ENST00000428088 ZBTB7AO95365 584 aa26.25■■□□□ 1.79
AL954642.1-201ENST00000428088 PAPPAQ13219 1627 aa26.24■■□□□ 1.79
AL954642.1-201ENST00000428088 NSD2O96028 1365 aa26.23■■□□□ 1.79
AL954642.1-201ENST00000428088 PCDH11XQ9BZA7 1347 aa26.22■■□□□ 1.79
AL954642.1-201ENST00000428088 PCDH11YQ9BZA8 1340 aa26.22■■□□□ 1.79
AL954642.1-201ENST00000428088 EYA1Q99502 592 aa26.22■■□□□ 1.79
AL954642.1-201ENST00000428088 KCNQ4P56696 695 aa26.21■■□□□ 1.79
AL954642.1-201ENST00000428088 ZNF827Q17R98 1081 aa26.21■■□□□ 1.79
AL954642.1-201ENST00000428088 ATF5Q9Y2D1 282 aaPredicted RBP26.21■■□□□ 1.79
AL954642.1-201ENST00000428088 SLC27A3Q5K4L6 730 aa26.2■■□□□ 1.78
AL954642.1-201ENST00000428088 NCAPD2Q15021 1401 aa26.2■■□□□ 1.78
AL954642.1-201ENST00000428088 CYP27B1O15528 508 aa26.19■■□□□ 1.78
AL954642.1-201ENST00000428088 LY75O60449 1722 aa26.19■■□□□ 1.78
AL954642.1-201ENST00000428088 PKD1L3Q7Z443 1732 aa26.17■■□□□ 1.78
AL954642.1-201ENST00000428088 EIF4A2Q14240 407 aaKnown RBP26.17■■□□□ 1.78
AL954642.1-201ENST00000428088 PTGER2P43116 358 aa26.16■■□□□ 1.78
AL954642.1-201ENST00000428088 KIF7Q2M1P5 1343 aa26.15■■□□□ 1.78
AL954642.1-201ENST00000428088 MORC1Q86VD1 984 aa26.15■■□□□ 1.78
AL954642.1-201ENST00000428088 AKT1S1Q96B36 256 aa26.15■■□□□ 1.78
AL954642.1-201ENST00000428088 KNSTRNQ9Y448 316 aa26.15■■□□□ 1.78
AL954642.1-201ENST00000428088 MTFR1LQ9H019 292 aa26.14■■□□□ 1.78
AL954642.1-201ENST00000428088 SPG7Q9UQ90 795 aa26.14■■□□□ 1.78
AL954642.1-201ENST00000428088 MPRIPQ6WCQ1 1025 aa26.13■■□□□ 1.77
AL954642.1-201ENST00000428088 CCNL1Q9UK58 526 aaPredicted RBP26.13■■□□□ 1.77
AL954642.1-201ENST00000428088 ITGB4P16144 1822 aa26.13■■□□□ 1.77
AL954642.1-201ENST00000428088 TOGARAM1Q9Y4F4 1720 aa26.12■■□□□ 1.77
AL954642.1-201ENST00000428088 TUBGCP6Q96RT7 1819 aa26.1■■□□□ 1.77
AL954642.1-201ENST00000428088 TFCP2L1Q9NZI6 479 aa26.1■■□□□ 1.77
AL954642.1-201ENST00000428088 QSER1Q2KHR3 1735 aa26.09■■□□□ 1.77
AL954642.1-201ENST00000428088 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.09■■□□□ 1.77
AL954642.1-201ENST00000428088 NKX1-1Q15270 411 aaPredicted RBP26.08■■□□□ 1.77
AL954642.1-201ENST00000428088 SGIP1Q9BQI5 828 aa26.08■■□□□ 1.77
AL954642.1-201ENST00000428088 AMER1Q5JTC6 1135 aaPredicted RBP26.07■■□□□ 1.76
AL954642.1-201ENST00000428088 PNPLA7Q6ZV29 1317 aa26.07■■□□□ 1.76
AL954642.1-201ENST00000428088 IGSF1Q8N6C5 1336 aa26.07■■□□□ 1.76
AL954642.1-201ENST00000428088 PALLDQ8WX93 1383 aa26.06■■□□□ 1.76
AL954642.1-201ENST00000428088 IFNL2Q8IZJ0 200 aa26.05■■□□□ 1.76
AL954642.1-201ENST00000428088 PIGBQ92521 554 aa26.05■■□□□ 1.76
AL954642.1-201ENST00000428088 PHKG2P15735 406 aa26.04■■□□□ 1.76
AL954642.1-201ENST00000428088 FHDC1Q9C0D6 1143 aaPredicted RBP26.03■■□□□ 1.76
AL954642.1-201ENST00000428088 SLC16A10Q8TF71 515 aa26.02■■□□□ 1.76
AL954642.1-201ENST00000428088 C5P01031 1676 aa26.02■■□□□ 1.76
AL954642.1-201ENST00000428088 TAF1LQ8IZX4 1826 aa26.02■■□□□ 1.76
AL954642.1-201ENST00000428088 SMARCC1Q92922 1105 aaPredicted RBP26.01■■□□□ 1.75
AL954642.1-201ENST00000428088 ARXQ96QS3 562 aa26.01■■□□□ 1.75
AL954642.1-201ENST00000428088 DCAF8L1A6NGE4 600 aa26■■□□□ 1.75
AL954642.1-201ENST00000428088 PER1O15534 1290 aaPredicted RBP26■■□□□ 1.75
AL954642.1-201ENST00000428088 SYT17Q9BSW7 474 aa26■■□□□ 1.75
AL954642.1-201ENST00000428088 AEBP1Q8IUX7 1158 aa25.99■■□□□ 1.75
AL954642.1-201ENST00000428088 TMOD3Q9NYL9 352 aa25.99■■□□□ 1.75
AL954642.1-201ENST00000428088 MSH5O43196 834 aa25.98■■□□□ 1.75
AL954642.1-201ENST00000428088 PLEKHG2Q9H7P9 1386 aa25.97■■□□□ 1.75
AL954642.1-201ENST00000428088 PLEKHO1Q53GL0 409 aaPredicted RBP25.97■■□□□ 1.75
AL954642.1-201ENST00000428088 CC2D1BQ5T0F9 858 aaKnown RBP25.97■■□□□ 1.75
AL954642.1-201ENST00000428088 COL23A1Q86Y22 540 aaPredicted RBP25.97■■□□□ 1.75
AL954642.1-201ENST00000428088 IL13P35225 146 aa25.96■■□□□ 1.75
AL954642.1-201ENST00000428088 ASAP1Q9ULH1 1129 aa25.96■■□□□ 1.75
AL954642.1-201ENST00000428088 COL24A1Q17RW2 1714 aa25.96■■□□□ 1.75
AL954642.1-201ENST00000428088 UTRNP46939 3433 aa25.95■■□□□ 1.74
AL954642.1-201ENST00000428088 POLD1P28340 1107 aa25.95■■□□□ 1.74
AL954642.1-201ENST00000428088 MTHFSP49914 203 aa25.95■■□□□ 1.74
AL954642.1-201ENST00000428088 SULT6B1Q6IMI4 303 aa25.95■■□□□ 1.74
AL954642.1-201ENST00000428088 ZNF530Q6P9A1 599 aaPredicted RBP25.94■■□□□ 1.74
AL954642.1-201ENST00000428088 HMGB2P26583 209 aaKnown RBP25.93■■□□□ 1.74
AL954642.1-201ENST00000428088 CNGB1Q14028 1251 aaPredicted RBP25.93■■□□□ 1.74
AL954642.1-201ENST00000428088 AMOTQ4VCS5 1084 aa25.93■■□□□ 1.74
AL954642.1-201ENST00000428088 C4BP0C0L5 1744 aa25.93■■□□□ 1.74
AL954642.1-201ENST00000428088 LOC102724428A0A0B4J2F2 783 aa25.92■■□□□ 1.74
AL954642.1-201ENST00000428088 SIK1P57059 783 aa25.92■■□□□ 1.74
AL954642.1-201ENST00000428088 HSP90AB1P08238 724 aaKnown RBP25.91■■□□□ 1.74
AL954642.1-201ENST00000428088 KLHL34Q8N239 644 aa25.91■■□□□ 1.74
AL954642.1-201ENST00000428088 DCAF5Q96JK2 942 aa25.91■■□□□ 1.74
AL954642.1-201ENST00000428088 ATG3Q9NT62 314 aa25.91■■□□□ 1.74
AL954642.1-201ENST00000428088 ERVV-2B6SEH9 535 aa25.9■■□□□ 1.74
AL954642.1-201ENST00000428088 AK7Q96M32 723 aa25.9■■□□□ 1.74
AL954642.1-201ENST00000428088 LINC00116Q8NCU8 138 aa25.89■■□□□ 1.74
AL954642.1-201ENST00000428088 KDRP35968 1356 aa25.89■■□□□ 1.74
AL954642.1-201ENST00000428088 MAP3K5Q99683 1374 aa25.88■■□□□ 1.73
AL954642.1-201ENST00000428088 YY1P25490 414 aa25.88■■□□□ 1.73
AL954642.1-201ENST00000428088 ATP6V1AP38606 617 aa25.88■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms