RNA–Protein interactions for RNA: ENST00000427746.1

HLCS-204, Transcript of holocarboxylase synthetase, humanhuman

TSL 3

Gene HLCS, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-204ENST00000427746 POLKQ9UBT6 870 aa26.64■■□□□ 1.86
HLCS-204ENST00000427746 MAP2P11137 1827 aaKnown RBP26.63■■□□□ 1.85
HLCS-204ENST00000427746 TXNRD1Q16881 649 aa26.63■■□□□ 1.85
HLCS-204ENST00000427746 PPM1GO15355 546 aaPredicted RBP26.62■■□□□ 1.85
HLCS-204ENST00000427746 NCAPD2Q15021 1401 aa26.62■■□□□ 1.85
HLCS-204ENST00000427746 KIF7Q2M1P5 1343 aa26.62■■□□□ 1.85
HLCS-204ENST00000427746 NSD2O96028 1365 aa26.61■■□□□ 1.85
HLCS-204ENST00000427746 BTAF1O14981 1849 aa26.61■■□□□ 1.85
HLCS-204ENST00000427746 RAPGEF4Q8WZA2 1011 aa26.61■■□□□ 1.85
HLCS-204ENST00000427746 ANO8Q9HCE9 1232 aaPredicted RBP26.61■■□□□ 1.85
HLCS-204ENST00000427746 TATP17735 454 aaPredicted RBP26.58■■□□□ 1.85
HLCS-204ENST00000427746 TNNT2P45379 298 aaPredicted RBP26.58■■□□□ 1.85
HLCS-204ENST00000427746 DOT1LQ8TEK3 1739 aa26.56■■□□□ 1.84
HLCS-204ENST00000427746 PRIM1P49642 420 aaKnown RBP26.54■■□□□ 1.84
HLCS-204ENST00000427746 EYA1Q99502 592 aa26.54■■□□□ 1.84
HLCS-204ENST00000427746 KNSTRNQ9Y448 316 aa26.53■■□□□ 1.84
HLCS-204ENST00000427746 PAPPAQ13219 1627 aa26.52■■□□□ 1.84
HLCS-204ENST00000427746 PCDH11XQ9BZA7 1347 aa26.52■■□□□ 1.84
HLCS-204ENST00000427746 PCDH11YQ9BZA8 1340 aa26.52■■□□□ 1.84
HLCS-204ENST00000427746 CASZ1Q86V15 1759 aa26.51■■□□□ 1.83
HLCS-204ENST00000427746 PKD1L3Q7Z443 1732 aa26.51■■□□□ 1.83
HLCS-204ENST00000427746 EIF4A2Q14240 407 aaKnown RBP26.51■■□□□ 1.83
HLCS-204ENST00000427746 SLC15A2Q16348 729 aa26.5■■□□□ 1.83
HLCS-204ENST00000427746 AMER1Q5JTC6 1135 aaPredicted RBP26.5■■□□□ 1.83
HLCS-204ENST00000427746 MORC1Q86VD1 984 aa26.5■■□□□ 1.83
HLCS-204ENST00000427746 SYTL4Q96C24 671 aaPredicted RBP26.5■■□□□ 1.83
HLCS-204ENST00000427746 STK32BQ9NY57 414 aa26.5■■□□□ 1.83
HLCS-204ENST00000427746 KAT6BQ8WYB5 2073 aa26.5■■□□□ 1.83
HLCS-204ENST00000427746 CYP27B1O15528 508 aa26.49■■□□□ 1.83
HLCS-204ENST00000427746 LRRC4BQ9NT99 713 aa26.49■■□□□ 1.83
HLCS-204ENST00000427746 PDGFDQ9GZP0 370 aaPredicted RBP26.48■■□□□ 1.83
HLCS-204ENST00000427746 PER1O15534 1290 aaPredicted RBP26.46■■□□□ 1.83
HLCS-204ENST00000427746 SPON1Q9HCB6 807 aa26.46■■□□□ 1.83
HLCS-204ENST00000427746 SLC27A3Q5K4L6 730 aa26.45■■□□□ 1.82
HLCS-204ENST00000427746 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.45■■□□□ 1.82
HLCS-204ENST00000427746 IGSF1Q8N6C5 1336 aa26.44■■□□□ 1.82
HLCS-204ENST00000427746 LY75O60449 1722 aa26.44■■□□□ 1.82
HLCS-204ENST00000427746 SPG7Q9UQ90 795 aa26.43■■□□□ 1.82
HLCS-204ENST00000427746 PLEKHG2Q9H7P9 1386 aa26.43■■□□□ 1.82
HLCS-204ENST00000427746 NKX1-1Q15270 411 aaPredicted RBP26.42■■□□□ 1.82
HLCS-204ENST00000427746 TOGARAM1Q9Y4F4 1720 aa26.42■■□□□ 1.82
HLCS-204ENST00000427746 ZNF827Q17R98 1081 aa26.41■■□□□ 1.82
HLCS-204ENST00000427746 AKT1S1Q96B36 256 aa26.39■■□□□ 1.82
HLCS-204ENST00000427746 KCNQ4P56696 695 aa26.38■■□□□ 1.81
HLCS-204ENST00000427746 ZBTB7AO95365 584 aa26.37■■□□□ 1.81
HLCS-204ENST00000427746 ITGB4P16144 1822 aa26.35■■□□□ 1.81
HLCS-204ENST00000427746 PHKG2P15735 406 aa26.35■■□□□ 1.81
HLCS-204ENST00000427746 MPRIPQ6WCQ1 1025 aa26.35■■□□□ 1.81
HLCS-204ENST00000427746 CCNL1Q9UK58 526 aaPredicted RBP26.35■■□□□ 1.81
HLCS-204ENST00000427746 NPC1L1Q9UHC9 1359 aa26.34■■□□□ 1.81
HLCS-204ENST00000427746 PTGER2P43116 358 aa26.34■■□□□ 1.81
HLCS-204ENST00000427746 IFNL2Q8IZJ0 200 aa26.34■■□□□ 1.81
HLCS-204ENST00000427746 QSER1Q2KHR3 1735 aa26.34■■□□□ 1.81
HLCS-204ENST00000427746 IL13P35225 146 aa26.33■■□□□ 1.81
HLCS-204ENST00000427746 MTFR1LQ9H019 292 aa26.33■■□□□ 1.81
HLCS-204ENST00000427746 CC2D1BQ5T0F9 858 aaKnown RBP26.32■■□□□ 1.8
HLCS-204ENST00000427746 PIGBQ92521 554 aa26.32■■□□□ 1.8
HLCS-204ENST00000427746 PPP1R1BQ9UD71 204 aaPredicted RBP26.32■■□□□ 1.8
HLCS-204ENST00000427746 ATF5Q9Y2D1 282 aaPredicted RBP26.32■■□□□ 1.8
HLCS-204ENST00000427746 PALLDQ8WX93 1383 aa26.32■■□□□ 1.8
HLCS-204ENST00000427746 MTHFSP49914 203 aa26.31■■□□□ 1.8
HLCS-204ENST00000427746 AEBP1Q8IUX7 1158 aa26.31■■□□□ 1.8
HLCS-204ENST00000427746 KDRP35968 1356 aa26.31■■□□□ 1.8
HLCS-204ENST00000427746 SGIP1Q9BQI5 828 aa26.3■■□□□ 1.8
HLCS-204ENST00000427746 PNPLA7Q6ZV29 1317 aa26.29■■□□□ 1.8
HLCS-204ENST00000427746 TUBGCP6Q96RT7 1819 aa26.28■■□□□ 1.8
HLCS-204ENST00000427746 PLEKHO1Q53GL0 409 aaPredicted RBP26.28■■□□□ 1.8
HLCS-204ENST00000427746 SMARCC1Q92922 1105 aaPredicted RBP26.28■■□□□ 1.8
HLCS-204ENST00000427746 SULT6B1Q6IMI4 303 aa26.27■■□□□ 1.8
HLCS-204ENST00000427746 TFCP2L1Q9NZI6 479 aa26.27■■□□□ 1.8
HLCS-204ENST00000427746 C5P01031 1676 aa26.26■■□□□ 1.79
HLCS-204ENST00000427746 AMOTQ4VCS5 1084 aa26.26■■□□□ 1.79
HLCS-204ENST00000427746 TMOD3Q9NYL9 352 aa26.26■■□□□ 1.79
HLCS-204ENST00000427746 SLC16A10Q8TF71 515 aa26.24■■□□□ 1.79
HLCS-204ENST00000427746 TAF1LQ8IZX4 1826 aa26.23■■□□□ 1.79
HLCS-204ENST00000427746 ZNF530Q6P9A1 599 aaPredicted RBP26.23■■□□□ 1.79
HLCS-204ENST00000427746 DCAF5Q96JK2 942 aa26.23■■□□□ 1.79
HLCS-204ENST00000427746 ERVV-2B6SEH9 535 aa26.22■■□□□ 1.79
HLCS-204ENST00000427746 HSP90AB1P08238 724 aaKnown RBP26.22■■□□□ 1.79
HLCS-204ENST00000427746 KDM6AO15550 1401 aaPredicted RBP26.22■■□□□ 1.79
HLCS-204ENST00000427746 HMGB2P26583 209 aaKnown RBP26.21■■□□□ 1.79
HLCS-204ENST00000427746 ASAP1Q9ULH1 1129 aa26.21■■□□□ 1.79
HLCS-204ENST00000427746 COL24A1Q17RW2 1714 aa26.21■■□□□ 1.79
HLCS-204ENST00000427746 COL3A1P02461 1466 aaPredicted RBP26.19■■□□□ 1.78
HLCS-204ENST00000427746 ATG3Q9NT62 314 aa26.19■■□□□ 1.78
HLCS-204ENST00000427746 LOC102724428A0A0B4J2F2 783 aa26.18■■□□□ 1.78
HLCS-204ENST00000427746 DIAPH1O60610 1272 aaKnown RBP26.18■■□□□ 1.78
HLCS-204ENST00000427746 C4BP0C0L5 1744 aa26.18■■□□□ 1.78
HLCS-204ENST00000427746 SIK1P57059 783 aa26.18■■□□□ 1.78
HLCS-204ENST00000427746 CNGB1Q14028 1251 aaPredicted RBP26.18■■□□□ 1.78
HLCS-204ENST00000427746 COL23A1Q86Y22 540 aaPredicted RBP26.17■■□□□ 1.78
HLCS-204ENST00000427746 ARXQ96QS3 562 aa26.17■■□□□ 1.78
HLCS-204ENST00000427746 C1orf141Q5JVX7 400 aa26.16■■□□□ 1.78
HLCS-204ENST00000427746 FHDC1Q9C0D6 1143 aaPredicted RBP26.16■■□□□ 1.78
HLCS-204ENST00000427746 HMOX1P09601 288 aa26.15■■□□□ 1.78
HLCS-204ENST00000427746 ITPK1Q13572 414 aa26.13■■□□□ 1.77
HLCS-204ENST00000427746 LINC00116Q8NCU8 138 aa26.13■■□□□ 1.77
HLCS-204ENST00000427746 SYT17Q9BSW7 474 aa26.13■■□□□ 1.77
HLCS-204ENST00000427746 MAP3K5Q99683 1374 aa26.12■■□□□ 1.77
HLCS-204ENST00000427746 CABP4P57796 275 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms