RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 RAB11FIP4Q86YS3 637 aa15.61■□□□□ 0.09
SPG11-202ENST00000427534 SERPINC1P01008 464 aa15.61■□□□□ 0.09
SPG11-202ENST00000427534 GUCY1B3Q02153 619 aa15.61■□□□□ 0.09
SPG11-202ENST00000427534 HMGXB3Q12766 1538 aa15.61■□□□□ 0.09
SPG11-202ENST00000427534 HECW1Q76N89 1606 aa15.61■□□□□ 0.09
SPG11-202ENST00000427534 NUCB2P80303 420 aa15.61■□□□□ 0.09
SPG11-202ENST00000427534 ENOX2Q16206 610 aaKnown RBP15.61■□□□□ 0.09
SPG11-202ENST00000427534 CCDC144CPQ8IYA2 1237 aa15.61■□□□□ 0.09
SPG11-202ENST00000427534 UBA5Q9GZZ9 404 aa15.6■□□□□ 0.09
SPG11-202ENST00000427534 CENPHQ9H3R5 247 aa15.6■□□□□ 0.09
SPG11-202ENST00000427534 ERBINQ96RT1 1412 aa15.6■□□□□ 0.09
SPG11-202ENST00000427534 UBAC1Q9BSL1 405 aa15.6■□□□□ 0.09
SPG11-202ENST00000427534 NEBLO76041 1014 aa15.6■□□□□ 0.09
SPG11-202ENST00000427534 AK7Q96M32 723 aa15.6■□□□□ 0.09
SPG11-202ENST00000427534 DEF6Q9H4E7 631 aa15.6■□□□□ 0.09
SPG11-202ENST00000427534 EXOC6BQ9Y2D4 811 aa15.6■□□□□ 0.09
SPG11-202ENST00000427534 PLCD4Q9BRC7 762 aa15.6■□□□□ 0.09
SPG11-202ENST00000427534 F8W031 263 aaPredicted RBP15.59■□□□□ 0.09
SPG11-202ENST00000427534 FAM193AP78312 1265 aa15.59■□□□□ 0.09
SPG11-202ENST00000427534 FBLN1P23142 703 aa15.59■□□□□ 0.09
SPG11-202ENST00000427534 PNISRQ8TF01 805 aaKnown RBP15.59■□□□□ 0.09
SPG11-202ENST00000427534 PIP4K2AP48426 406 aaPredicted RBP15.59■□□□□ 0.09
SPG11-202ENST00000427534 JAKMIP1Q96N16 626 aaKnown RBP15.59■□□□□ 0.09
SPG11-202ENST00000427534 TMX1Q9H3N1 280 aa15.59■□□□□ 0.09
SPG11-202ENST00000427534 RPGRQ92834 1020 aaKnown RBP15.59■□□□□ 0.09
SPG11-202ENST00000427534 NAT10Q9H0A0 1025 aaKnown RBP15.59■□□□□ 0.09
SPG11-202ENST00000427534 CCDC96Q2M329 555 aa15.58■□□□□ 0.09
SPG11-202ENST00000427534 FBXO31Q5XUX0 539 aaPredicted RBP15.58■□□□□ 0.09
SPG11-202ENST00000427534 ZBTB3Q9H5J0 574 aa15.58■□□□□ 0.09
SPG11-202ENST00000427534 C6orf229H3BNL8 230 aa15.58■□□□□ 0.08
SPG11-202ENST00000427534 AIDAQ96BJ3 306 aa15.58■□□□□ 0.08
SPG11-202ENST00000427534 NUDT16Q96DE0 195 aaKnown RBP15.58■□□□□ 0.08
SPG11-202ENST00000427534 VAT1LQ9HCJ6 419 aa15.58■□□□□ 0.08
SPG11-202ENST00000427534 F6X3S4 739 aa15.58■□□□□ 0.08
SPG11-202ENST00000427534 PDE3AQ14432 1141 aa15.58■□□□□ 0.08
SPG11-202ENST00000427534 CCDC173Q0VFZ6 552 aa15.58■□□□□ 0.08
SPG11-202ENST00000427534 BOLA2Q9H3K6 86 aa15.58■□□□□ 0.08
SPG11-202ENST00000427534 TMOD2Q9NZR1 351 aa15.57■□□□□ 0.08
SPG11-202ENST00000427534 CYP46A1Q9Y6A2 500 aa15.57■□□□□ 0.08
SPG11-202ENST00000427534 CAMK4Q16566 473 aa15.57■□□□□ 0.08
SPG11-202ENST00000427534 STARD3NLO95772 234 aa15.57■□□□□ 0.08
SPG11-202ENST00000427534 SLC52A1Q9NWF4 448 aa15.57■□□□□ 0.08
SPG11-202ENST00000427534 TRIM22Q8IYM9 498 aa15.57■□□□□ 0.08
SPG11-202ENST00000427534 NOM1Q5C9Z4 860 aaKnown RBP15.56■□□□□ 0.08
SPG11-202ENST00000427534 ERC1Q8IUD2 1116 aa15.56■□□□□ 0.08
SPG11-202ENST00000427534 MKNK2Q9HBH9 465 aa15.56■□□□□ 0.08
SPG11-202ENST00000427534 CEP126Q9P2H0 1117 aa15.56■□□□□ 0.08
SPG11-202ENST00000427534 DNA2P51530 1060 aa15.56■□□□□ 0.08
SPG11-202ENST00000427534 NFKBIBQ15653 356 aa15.56■□□□□ 0.08
SPG11-202ENST00000427534 DZIP1Q86YF9 867 aaKnown RBP15.56■□□□□ 0.08
SPG11-202ENST00000427534 TMEM87AQ8NBN3 555 aa15.56■□□□□ 0.08
SPG11-202ENST00000427534 CCDC8Q9H0W5 538 aaPredicted RBP15.56■□□□□ 0.08
SPG11-202ENST00000427534 CLEC11AQ9Y240 323 aa15.56■□□□□ 0.08
SPG11-202ENST00000427534 NME9Q86XW9 330 aa15.56■□□□□ 0.08
SPG11-202ENST00000427534 GNAT3A8MTJ3 354 aa15.55■□□□□ 0.08
SPG11-202ENST00000427534 TNNT1P13805 278 aa15.55■□□□□ 0.08
SPG11-202ENST00000427534 CC2D2AQ9P2K1 1620 aa15.55■□□□□ 0.08
SPG11-202ENST00000427534 FILIP1LQ4L180 1135 aa15.55■□□□□ 0.08
SPG11-202ENST00000427534 TRMT112Q9UI30 125 aaKnown RBP15.55■□□□□ 0.08
SPG11-202ENST00000427534 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.55■□□□□ 0.08
SPG11-202ENST00000427534 RANBP6O60518 1105 aaKnown RBP15.55■□□□□ 0.08
SPG11-202ENST00000427534 PODXL2Q9NZ53 605 aa15.55■□□□□ 0.08
SPG11-202ENST00000427534 ATP5J2-PTCD1G3V325 749 aa15.55■□□□□ 0.08
SPG11-202ENST00000427534 C8orf37Q96NL8 207 aa15.55■□□□□ 0.08
SPG11-202ENST00000427534 ZNF692Q9BU19 519 aaPredicted RBP15.54■□□□□ 0.08
SPG11-202ENST00000427534 TAX1BP1Q86VP1 789 aa15.54■□□□□ 0.08
SPG11-202ENST00000427534 NASPP49321 788 aaPredicted RBP15.54■□□□□ 0.08
SPG11-202ENST00000427534 AKNAQ7Z591 1439 aa15.54■□□□□ 0.08
SPG11-202ENST00000427534 RBM26Q5T8P6 1007 aaKnown RBP15.54■□□□□ 0.08
SPG11-202ENST00000427534 RPGRIP1LQ68CZ1 1315 aa15.53■□□□□ 0.08
SPG11-202ENST00000427534 DNMBPQ6XZF7 1577 aa15.53■□□□□ 0.08
SPG11-202ENST00000427534 IQSEC3Q9UPP2 1182 aaPredicted RBP15.53■□□□□ 0.08
SPG11-202ENST00000427534 GCC1Q96CN9 775 aa15.53■□□□□ 0.08
SPG11-202ENST00000427534 ZNF396Q96N95 335 aaPredicted RBP15.53■□□□□ 0.08
SPG11-202ENST00000427534 RBM10P98175 930 aaKnown RBP15.53■□□□□ 0.08
SPG11-202ENST00000427534 WDR63Q8IWG1 891 aa15.53■□□□□ 0.08
SPG11-202ENST00000427534 MAP7D2Q96T17 732 aa15.53■□□□□ 0.08
SPG11-202ENST00000427534 PDRG1Q9NUG6 133 aa15.53■□□□□ 0.08
SPG11-202ENST00000427534 CASTP20810 708 aaKnown RBP15.53■□□□□ 0.08
SPG11-202ENST00000427534 LARP1BQ659C4 914 aaKnown RBP15.52■□□□□ 0.08
SPG11-202ENST00000427534 CDK13Q14004 1512 aaKnown RBP15.52■□□□□ 0.08
SPG11-202ENST00000427534 EPRSP07814 1512 aaKnown RBP15.52■□□□□ 0.08
SPG11-202ENST00000427534 CCDC184Q52MB2 194 aa15.52■□□□□ 0.08
SPG11-202ENST00000427534 TAF3Q5VWG9 929 aa15.52■□□□□ 0.08
SPG11-202ENST00000427534 CAVIN4Q5BKX8 364 aa15.52■□□□□ 0.07
SPG11-202ENST00000427534 FERMT3Q86UX7 667 aa15.52■□□□□ 0.07
SPG11-202ENST00000427534 TSPY26PQ9H489 355 aa15.52■□□□□ 0.07
SPG11-202ENST00000427534 NAIPQ13075 1403 aa15.52■□□□□ 0.07
SPG11-202ENST00000427534 AXDND1Q5T1B0 1012 aaPredicted RBP15.52■□□□□ 0.07
SPG11-202ENST00000427534 SNRKQ9NRH2 765 aa15.52■□□□□ 0.07
SPG11-202ENST00000427534 ANXA1P04083 346 aa15.51■□□□□ 0.07
SPG11-202ENST00000427534 KIAA0586Q9BVV6 1533 aa15.51■□□□□ 0.07
SPG11-202ENST00000427534 SMARCE1Q969G3 411 aa15.51■□□□□ 0.07
SPG11-202ENST00000427534 VTI1AQ96AJ9 217 aa15.51■□□□□ 0.07
SPG11-202ENST00000427534 TNMDQ9H2S6 317 aa15.51■□□□□ 0.07
SPG11-202ENST00000427534 CCT4P50991 539 aaKnown RBP15.51■□□□□ 0.07
SPG11-202ENST00000427534 TSHZ3Q63HK5 1081 aa15.51■□□□□ 0.07
SPG11-202ENST00000427534 KLHL10Q6JEL2 608 aa15.51■□□□□ 0.07
SPG11-202ENST00000427534 SUPT6HQ7KZ85 1726 aaKnown RBP15.51■□□□□ 0.07
SPG11-202ENST00000427534 ANKRD30BQ9BXX2 1392 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms