RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 SPC24Q8NBT2 197 aa9.12□□□□□ -0.95
LINC01108-201ENST00000427276 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.12□□□□□ -0.95
LINC01108-201ENST00000427276 A0A1W2PP64 1363 aa9.12□□□□□ -0.95
LINC01108-201ENST00000427276 PLCH2O75038 1416 aa9.11□□□□□ -0.95
LINC01108-201ENST00000427276 RRS1Q15050 365 aaKnown RBP9.11□□□□□ -0.95
LINC01108-201ENST00000427276 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.11□□□□□ -0.95
LINC01108-201ENST00000427276 TMX3Q96JJ7 454 aa9.11□□□□□ -0.95
LINC01108-201ENST00000427276 MIS18AQ9NYP9 233 aa9.11□□□□□ -0.95
LINC01108-201ENST00000427276 ZDHHC9Q9Y397 364 aa9.11□□□□□ -0.95
LINC01108-201ENST00000427276 ANKRD36BQ8N2N9 1353 aa9.11□□□□□ -0.95
LINC01108-201ENST00000427276 ERC2O15083 957 aa9.11□□□□□ -0.95
LINC01108-201ENST00000427276 VGFO15240 615 aaPredicted RBP9.11□□□□□ -0.95
LINC01108-201ENST00000427276 FCHSD2O94868 740 aa9.11□□□□□ -0.95
LINC01108-201ENST00000427276 NFE2L2Q16236 605 aa9.11□□□□□ -0.95
LINC01108-201ENST00000427276 SYAP1Q96A49 352 aaPredicted RBP9.11□□□□□ -0.95
LINC01108-201ENST00000427276 DYNC1I1O14576 645 aa9.1□□□□□ -0.95
LINC01108-201ENST00000427276 GADD45BO75293 160 aaPredicted RBP9.1□□□□□ -0.95
LINC01108-201ENST00000427276 MAP4K4O95819 1239 aaPredicted RBP9.1□□□□□ -0.95
LINC01108-201ENST00000427276 MEIS3Q99687 375 aa9.1□□□□□ -0.95
LINC01108-201ENST00000427276 TRPM2O94759 1503 aa9.1□□□□□ -0.95
LINC01108-201ENST00000427276 SHPRHQ149N8 1683 aa9.1□□□□□ -0.95
LINC01108-201ENST00000427276 NUTM2FA1L443 756 aa9.1□□□□□ -0.95
LINC01108-201ENST00000427276 F6X3S4 739 aa9.1□□□□□ -0.95
LINC01108-201ENST00000427276 ZNF500O60304 480 aaPredicted RBP9.1□□□□□ -0.95
LINC01108-201ENST00000427276 MBD3O95983 291 aa9.1□□□□□ -0.95
LINC01108-201ENST00000427276 MCCP23508 829 aa9.1□□□□□ -0.95
LINC01108-201ENST00000427276 ZRANB1Q9UGI0 708 aa9.1□□□□□ -0.95
LINC01108-201ENST00000427276 IL16Q14005 1332 aa9.1□□□□□ -0.95
LINC01108-201ENST00000427276 FIBPO43427 364 aa9.1□□□□□ -0.95
LINC01108-201ENST00000427276 HCLS1P14317 486 aaPredicted RBP9.1□□□□□ -0.95
LINC01108-201ENST00000427276 ABCA6Q8N139 1617 aa9.09□□□□□ -0.95
LINC01108-201ENST00000427276 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.09□□□□□ -0.95
LINC01108-201ENST00000427276 DCTPP1Q9H773 170 aa9.09□□□□□ -0.95
LINC01108-201ENST00000427276 MCM10Q7L590 875 aa9.09□□□□□ -0.95
LINC01108-201ENST00000427276 CDK19Q9BWU1 502 aa9.09□□□□□ -0.95
LINC01108-201ENST00000427276 ZCCHC11Q5TAX3 1644 aaKnown RBP9.08□□□□□ -0.96
LINC01108-201ENST00000427276 HS1BP3Q53T59 392 aa9.08□□□□□ -0.96
LINC01108-201ENST00000427276 CNKSR2Q8WXI2 1034 aa9.08□□□□□ -0.96
LINC01108-201ENST00000427276 PPP4R3BQ5MIZ7 849 aa9.08□□□□□ -0.96
LINC01108-201ENST00000427276 PDLIM2Q96JY6 352 aa9.08□□□□□ -0.96
LINC01108-201ENST00000427276 MAP3K4Q9Y6R4 1608 aa9.08□□□□□ -0.96
LINC01108-201ENST00000427276 ADCY5O95622 1261 aa9.08□□□□□ -0.96
LINC01108-201ENST00000427276 SLC4A2P04920 1241 aa9.08□□□□□ -0.96
LINC01108-201ENST00000427276 USP48Q86UV5 1035 aa9.08□□□□□ -0.96
LINC01108-201ENST00000427276 POLKQ9UBT6 870 aa9.08□□□□□ -0.96
LINC01108-201ENST00000427276 WAPLQ7Z5K2 1190 aa9.07□□□□□ -0.96
LINC01108-201ENST00000427276 DRC7Q8IY82 874 aa9.07□□□□□ -0.96
LINC01108-201ENST00000427276 DDX54Q8TDD1 881 aaKnown RBP9.07□□□□□ -0.96
LINC01108-201ENST00000427276 PALD1Q9ULE6 856 aa9.07□□□□□ -0.96
LINC01108-201ENST00000427276 CHAF1AQ13111 956 aaPredicted RBP9.07□□□□□ -0.96
LINC01108-201ENST00000427276 NOLC1Q14978 699 aaKnown RBP eCLIP9.07□□□□□ -0.96
LINC01108-201ENST00000427276 NME9Q86XW9 330 aa9.07□□□□□ -0.96
LINC01108-201ENST00000427276 HMMRO75330 724 aa9.06□□□□□ -0.96
LINC01108-201ENST00000427276 PHF14O94880 888 aa9.06□□□□□ -0.96
LINC01108-201ENST00000427276 CYP2E1P05181 493 aaPredicted RBP9.06□□□□□ -0.96
LINC01108-201ENST00000427276 CEP85Q6P2H3 762 aa9.06□□□□□ -0.96
LINC01108-201ENST00000427276 MTERF4Q7Z6M4 381 aaKnown RBP9.06□□□□□ -0.96
LINC01108-201ENST00000427276 IL1RAPL2Q9NP60 686 aa9.06□□□□□ -0.96
LINC01108-201ENST00000427276 PRDM4Q9UKN5 801 aa9.06□□□□□ -0.96
LINC01108-201ENST00000427276 IBTKQ9P2D0 1353 aaPredicted RBP9.06□□□□□ -0.96
LINC01108-201ENST00000427276 ANKRD44Q8N8A2 993 aa9.06□□□□□ -0.96
LINC01108-201ENST00000427276 ARHGAP45Q92619 1136 aa9.06□□□□□ -0.96
LINC01108-201ENST00000427276 IFT57Q9NWB7 429 aa9.06□□□□□ -0.96
LINC01108-201ENST00000427276 CNPY2Q9Y2B0 182 aa9.06□□□□□ -0.96
LINC01108-201ENST00000427276 ABCC1P33527 1531 aa9.06□□□□□ -0.96
LINC01108-201ENST00000427276 GIMAP6Q6P9H5 292 aa9.06□□□□□ -0.96
LINC01108-201ENST00000427276 CLEC17AQ6ZS10 378 aa9.06□□□□□ -0.96
LINC01108-201ENST00000427276 ADGRL1O94910 1474 aa9.05□□□□□ -0.96
LINC01108-201ENST00000427276 SBNO2Q9Y2G9 1366 aa9.05□□□□□ -0.96
LINC01108-201ENST00000427276 TERF1P54274 439 aa9.05□□□□□ -0.96
LINC01108-201ENST00000427276 SULT6B1Q6IMI4 303 aa9.05□□□□□ -0.96
LINC01108-201ENST00000427276 ZNF428Q96B54 188 aa9.05□□□□□ -0.96
LINC01108-201ENST00000427276 KIF3AQ9Y496 699 aa9.05□□□□□ -0.96
LINC01108-201ENST00000427276 NSD2O96028 1365 aa9.05□□□□□ -0.96
LINC01108-201ENST00000427276 MCM5P33992 734 aa9.05□□□□□ -0.96
LINC01108-201ENST00000427276 AEBP1Q8IUX7 1158 aa9.05□□□□□ -0.96
LINC01108-201ENST00000427276 RPAP2Q8IXW5 612 aaPredicted RBP9.05□□□□□ -0.96
LINC01108-201ENST00000427276 CCDC94Q9BW85 323 aaPredicted RBP9.05□□□□□ -0.96
LINC01108-201ENST00000427276 ABCC4O15439 1325 aa9.05□□□□□ -0.96
LINC01108-201ENST00000427276 VPS37CA5D8V6 355 aaPredicted RBP9.04□□□□□ -0.96
LINC01108-201ENST00000427276 PDE1AP54750 535 aa9.04□□□□□ -0.96
LINC01108-201ENST00000427276 LMOD3Q0VAK6 560 aa9.04□□□□□ -0.96
LINC01108-201ENST00000427276 IDI1Q13907 227 aa9.04□□□□□ -0.96
LINC01108-201ENST00000427276 ZNF592Q92610 1267 aa9.04□□□□□ -0.96
LINC01108-201ENST00000427276 NCKAP5LQ9HCH0 1330 aa9.04□□□□□ -0.96
LINC01108-201ENST00000427276 ZFYVE16Q7Z3T8 1539 aa9.04□□□□□ -0.96
LINC01108-201ENST00000427276 CPA1P15085 419 aa9.04□□□□□ -0.96
LINC01108-201ENST00000427276 NUTM1Q86Y26 1132 aa9.04□□□□□ -0.96
LINC01108-201ENST00000427276 SMAP1Q8IYB5 467 aaPredicted RBP9.04□□□□□ -0.96
LINC01108-201ENST00000427276 MROH2AA6NES4 1674 aa9.03□□□□□ -0.96
LINC01108-201ENST00000427276 PDCL2Q8N4E4 241 aa9.03□□□□□ -0.96
LINC01108-201ENST00000427276 MYRIPQ8NFW9 859 aa9.03□□□□□ -0.96
LINC01108-201ENST00000427276 MSH6P52701 1360 aa9.03□□□□□ -0.96
LINC01108-201ENST00000427276 BRD1O95696 1058 aa9.03□□□□□ -0.96
LINC01108-201ENST00000427276 HMGN5P82970 282 aaKnown RBP9.03□□□□□ -0.96
LINC01108-201ENST00000427276 FKBP5Q13451 457 aaPredicted RBP9.03□□□□□ -0.96
LINC01108-201ENST00000427276 CAMK4Q16566 473 aa9.03□□□□□ -0.96
LINC01108-201ENST00000427276 G2E3Q7L622 706 aa9.03□□□□□ -0.96
LINC01108-201ENST00000427276 COG3Q96JB2 828 aa9.03□□□□□ -0.96
LINC01108-201ENST00000427276 FANCAO15360 1455 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms