RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 FAM98CQ17RN3 349 aaKnown RBP20.42■□□□□ 0.86
COL11A1-204ENST00000427239 RXRBP28702 533 aa20.41■□□□□ 0.86
COL11A1-204ENST00000427239 PLEKHO1Q53GL0 409 aaPredicted RBP20.41■□□□□ 0.86
COL11A1-204ENST00000427239 MAPK8IP3Q9UPT6 1336 aa20.41■□□□□ 0.86
COL11A1-204ENST00000427239 SPG7Q9UQ90 795 aa20.4■□□□□ 0.86
COL11A1-204ENST00000427239 EXOC5O00471 708 aa20.39■□□□□ 0.86
COL11A1-204ENST00000427239 PHACTR3Q96KR7 559 aa20.39■□□□□ 0.86
COL11A1-204ENST00000427239 DISP2A7MBM2 1401 aa20.39■□□□□ 0.85
COL11A1-204ENST00000427239 CCDC146Q8IYE0 955 aa20.39■□□□□ 0.85
COL11A1-204ENST00000427239 ZCRB1Q8TBF4 217 aaKnown RBP20.39■□□□□ 0.85
COL11A1-204ENST00000427239 OVOS2A0A0G2JMS6 1433 aa20.38■□□□□ 0.85
COL11A1-204ENST00000427239 MEGF6O75095 1541 aa20.38■□□□□ 0.85
COL11A1-204ENST00000427239 POTEAQ6S8J7 498 aa20.38■□□□□ 0.85
COL11A1-204ENST00000427239 DDB1Q16531 1140 aa20.37■□□□□ 0.85
COL11A1-204ENST00000427239 GAS2L2Q8NHY3 880 aa20.37■□□□□ 0.85
COL11A1-204ENST00000427239 GLI3P10071 1580 aa20.37■□□□□ 0.85
COL11A1-204ENST00000427239 MTHFSDQ2M296 383 aaKnown RBP20.36■□□□□ 0.85
COL11A1-204ENST00000427239 A0A0G2JS52 829 aa20.35■□□□□ 0.85
COL11A1-204ENST00000427239 MYT1Q01538 1121 aa20.35■□□□□ 0.85
COL11A1-204ENST00000427239 APAF1O14727 1248 aa20.34■□□□□ 0.85
COL11A1-204ENST00000427239 SEPT12Q8IYM1 358 aa20.34■□□□□ 0.85
COL11A1-204ENST00000427239 PCDH11XQ9BZA7 1347 aa20.33■□□□□ 0.85
COL11A1-204ENST00000427239 PCDH11YQ9BZA8 1340 aa20.33■□□□□ 0.85
COL11A1-204ENST00000427239 NFE2L2Q16236 605 aa20.33■□□□□ 0.85
COL11A1-204ENST00000427239 PARP4Q9UKK3 1724 aaKnown RBP20.33■□□□□ 0.84
COL11A1-204ENST00000427239 IFNL2Q8IZJ0 200 aa20.33■□□□□ 0.84
COL11A1-204ENST00000427239 NGEFQ8N5V2 710 aa20.33■□□□□ 0.84
COL11A1-204ENST00000427239 TMPOP42166 694 aaKnown RBP20.32■□□□□ 0.84
COL11A1-204ENST00000427239 NCBP3Q53F19 620 aaKnown RBP20.32■□□□□ 0.84
COL11A1-204ENST00000427239 C1orf141Q5JVX7 400 aa20.32■□□□□ 0.84
COL11A1-204ENST00000427239 ZNF530Q6P9A1 599 aaPredicted RBP20.32■□□□□ 0.84
COL11A1-204ENST00000427239 PDE3BQ13370 1112 aa20.31■□□□□ 0.84
COL11A1-204ENST00000427239 AKAP4Q5JQC9 854 aa20.31■□□□□ 0.84
COL11A1-204ENST00000427239 DDX54Q8TDD1 881 aaKnown RBP20.31■□□□□ 0.84
COL11A1-204ENST00000427239 RIPK4P57078 832 aa20.3■□□□□ 0.84
COL11A1-204ENST00000427239 GNAT3A8MTJ3 354 aa20.3■□□□□ 0.84
COL11A1-204ENST00000427239 CYP27B1O15528 508 aa20.3■□□□□ 0.84
COL11A1-204ENST00000427239 HTATSF1O43719 755 aaKnown RBP20.3■□□□□ 0.84
COL11A1-204ENST00000427239 HSP90AB1P08238 724 aaKnown RBP20.3■□□□□ 0.84
COL11A1-204ENST00000427239 PHKG2P15735 406 aa20.3■□□□□ 0.84
COL11A1-204ENST00000427239 TNS2Q63HR2 1409 aa20.3■□□□□ 0.84
COL11A1-204ENST00000427239 THSD7AQ9UPZ6 1657 aa20.29■□□□□ 0.84
COL11A1-204ENST00000427239 LMOD3Q0VAK6 560 aa20.28■□□□□ 0.84
COL11A1-204ENST00000427239 NEUROD2Q15784 382 aa20.28■□□□□ 0.84
COL11A1-204ENST00000427239 WNK3Q9BYP7 1800 aa20.28■□□□□ 0.84
COL11A1-204ENST00000427239 NKX1-1Q15270 411 aaPredicted RBP20.27■□□□□ 0.84
COL11A1-204ENST00000427239 RTF1Q92541 710 aaKnown RBP20.27■□□□□ 0.84
COL11A1-204ENST00000427239 PKD1L3Q7Z443 1732 aa20.27■□□□□ 0.84
COL11A1-204ENST00000427239 RRP7AQ9Y3A4 280 aaKnown RBP20.27■□□□□ 0.83
COL11A1-204ENST00000427239 MAP3K5Q99683 1374 aa20.26■□□□□ 0.83
COL11A1-204ENST00000427239 CCDC27Q2M243 656 aa20.26■□□□□ 0.83
COL11A1-204ENST00000427239 MARCH10Q8NA82 808 aaPredicted RBP20.26■□□□□ 0.83
COL11A1-204ENST00000427239 DCAF5Q96JK2 942 aa20.26■□□□□ 0.83
COL11A1-204ENST00000427239 KRT27Q7Z3Y8 459 aa20.25■□□□□ 0.83
COL11A1-204ENST00000427239 LRRC37A3O60309 1634 aa20.24■□□□□ 0.83
COL11A1-204ENST00000427239 HNRNPUQ00839 825 aaKnown RBP eCLIP20.23■□□□□ 0.83
COL11A1-204ENST00000427239 MPRIPQ6WCQ1 1025 aa20.23■□□□□ 0.83
COL11A1-204ENST00000427239 TRIM35Q9UPQ4 493 aa20.23■□□□□ 0.83
COL11A1-204ENST00000427239 IL17REQ8NFR9 667 aa20.22■□□□□ 0.83
COL11A1-204ENST00000427239 RGS12O14924 1447 aa20.21■□□□□ 0.83
COL11A1-204ENST00000427239 WWC1Q8IX03 1113 aa20.21■□□□□ 0.83
COL11A1-204ENST00000427239 LGR6Q9HBX8 967 aa20.21■□□□□ 0.83
COL11A1-204ENST00000427239 SALL2Q9Y467 1007 aaPredicted RBP20.21■□□□□ 0.83
COL11A1-204ENST00000427239 ERVV-2B6SEH9 535 aa20.2■□□□□ 0.82
COL11A1-204ENST00000427239 RNMTO43148 476 aaKnown RBP20.2■□□□□ 0.82
COL11A1-204ENST00000427239 SENP3-EIF4A1A0A087X0R7 540 aa20.19■□□□□ 0.82
COL11A1-204ENST00000427239 CALD1Q05682 793 aaKnown RBP20.19■□□□□ 0.82
COL11A1-204ENST00000427239 MCM10Q7L590 875 aa20.19■□□□□ 0.82
COL11A1-204ENST00000427239 SHANK3Q9BYB0 1731 aa20.19■□□□□ 0.82
COL11A1-204ENST00000427239 BCL9O00512 1426 aa20.19■□□□□ 0.82
COL11A1-204ENST00000427239 FAM196AQ6ZSG2 479 aa20.19■□□□□ 0.82
COL11A1-204ENST00000427239 CEMIPQ8WUJ3 1361 aa20.18■□□□□ 0.82
COL11A1-204ENST00000427239 DCTN1Q14203 1278 aa20.18■□□□□ 0.82
COL11A1-204ENST00000427239 WDR63Q8IWG1 891 aa20.18■□□□□ 0.82
COL11A1-204ENST00000427239 TEFQ10587 303 aa20.17■□□□□ 0.82
COL11A1-204ENST00000427239 EP400Q96L91 3159 aa20.17■□□□□ 0.82
COL11A1-204ENST00000427239 KDM6AO15550 1401 aaPredicted RBP20.16■□□□□ 0.82
COL11A1-204ENST00000427239 CABP4P57796 275 aa20.16■□□□□ 0.82
COL11A1-204ENST00000427239 FAM182BQ5T319 152 aa20.16■□□□□ 0.82
COL11A1-204ENST00000427239 SLC52A2Q9HAB3 445 aa20.16■□□□□ 0.82
COL11A1-204ENST00000427239 DLG5Q8TDM6 1919 aa20.15■□□□□ 0.82
COL11A1-204ENST00000427239 ZNF521Q96K83 1311 aa20.14■□□□□ 0.82
COL11A1-204ENST00000427239 TAF7Q15545 349 aaPredicted RBP20.14■□□□□ 0.81
COL11A1-204ENST00000427239 NFATC2IPQ8NCF5 419 aa20.14■□□□□ 0.81
COL11A1-204ENST00000427239 THUMPD2Q9BTF0 503 aaKnown RBP20.14■□□□□ 0.81
COL11A1-204ENST00000427239 ZBED9Q6R2W3 1325 aa20.14■□□□□ 0.81
COL11A1-204ENST00000427239 PRIM1P49642 420 aaKnown RBP20.13■□□□□ 0.81
COL11A1-204ENST00000427239 BRWD3Q6RI45 1802 aa20.13■□□□□ 0.81
COL11A1-204ENST00000427239 IL16Q14005 1332 aa20.13■□□□□ 0.81
COL11A1-204ENST00000427239 BABAM1Q9NWV8 329 aa20.13■□□□□ 0.81
COL11A1-204ENST00000427239 TMOD3Q9NYL9 352 aa20.13■□□□□ 0.81
COL11A1-204ENST00000427239 ADAMTS7Q9UKP4 1686 aa20.13■□□□□ 0.81
COL11A1-204ENST00000427239 SYTL4Q96C24 671 aaPredicted RBP20.12■□□□□ 0.81
COL11A1-204ENST00000427239 YTHDC1Q96MU7 727 aaKnown RBP20.12■□□□□ 0.81
COL11A1-204ENST00000427239 GOLGA2Q08379 1002 aa20.11■□□□□ 0.81
COL11A1-204ENST00000427239 ACSBG1Q96GR2 724 aa20.11■□□□□ 0.81
COL11A1-204ENST00000427239 CFAP44Q96MT7 982 aa20.11■□□□□ 0.81
COL11A1-204ENST00000427239 GNAI1P63096 354 aa20.1■□□□□ 0.81
COL11A1-204ENST00000427239 SCN11AQ9UI33 1791 aa20.1■□□□□ 0.81
COL11A1-204ENST00000427239 IFT57Q9NWB7 429 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms