RNA–Protein interactions for RNA: ENST00000427214.5

DDX39B-207, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-207ENST00000427214 USP6P35125 1406 aa9.49□□□□□ -0.89
DDX39B-207ENST00000427214 SSH2Q76I76 1423 aa9.49□□□□□ -0.89
DDX39B-207ENST00000427214 SEPT12Q8IYM1 358 aa9.49□□□□□ -0.89
DDX39B-207ENST00000427214 KRTAP3-3Q9BYR6 98 aa9.49□□□□□ -0.89
DDX39B-207ENST00000427214 KRTAP3-2Q9BYR7 98 aa9.49□□□□□ -0.89
DDX39B-207ENST00000427214 COL14A1Q05707 1796 aaKnown RBP9.49□□□□□ -0.89
DDX39B-207ENST00000427214 USP19O94966 1318 aa9.49□□□□□ -0.89
DDX39B-207ENST00000427214 ERBB3P21860 1342 aa9.49□□□□□ -0.89
DDX39B-207ENST00000427214 PHRF1Q9P1Y6 1649 aaKnown RBP9.49□□□□□ -0.89
DDX39B-207ENST00000427214 ONECUT3O60422 494 aaPredicted RBP9.48□□□□□ -0.89
DDX39B-207ENST00000427214 GPR153Q6NV75 609 aa9.48□□□□□ -0.89
DDX39B-207ENST00000427214 SBNO2Q9Y2G9 1366 aa9.48□□□□□ -0.89
DDX39B-207ENST00000427214 NRKQ7Z2Y5 1582 aa9.47□□□□□ -0.89
DDX39B-207ENST00000427214 MMRN1Q13201 1228 aa9.47□□□□□ -0.89
DDX39B-207ENST00000427214 FAM98CQ17RN3 349 aaKnown RBP9.47□□□□□ -0.89
DDX39B-207ENST00000427214 SPATA31A5Q5VU36 1347 aa9.47□□□□□ -0.89
DDX39B-207ENST00000427214 SPATA31A7Q8IWB4 1347 aa9.47□□□□□ -0.89
DDX39B-207ENST00000427214 BRD4O60885 1362 aaPredicted RBP9.47□□□□□ -0.89
DDX39B-207ENST00000427214 KIF3CO14782 793 aa9.46□□□□□ -0.9
DDX39B-207ENST00000427214 GCP02774 474 aa9.46□□□□□ -0.9
DDX39B-207ENST00000427214 NLRP13Q86W25 1043 aa9.46□□□□□ -0.9
DDX39B-207ENST00000427214 STRN4Q9NRL3 753 aa9.46□□□□□ -0.9
DDX39B-207ENST00000427214 TTC21BQ7Z4L5 1316 aa9.46□□□□□ -0.9
DDX39B-207ENST00000427214 CPDO75976 1380 aa9.46□□□□□ -0.9
DDX39B-207ENST00000427214 CPSF1Q10570 1443 aaKnown RBP9.46□□□□□ -0.9
DDX39B-207ENST00000427214 EP400Q96L91 3159 aa9.46□□□□□ -0.9
DDX39B-207ENST00000427214 BRWD3Q6RI45 1802 aa9.45□□□□□ -0.9
DDX39B-207ENST00000427214 C2orf72A6NCS6 295 aa9.45□□□□□ -0.9
DDX39B-207ENST00000427214 PPP1R37O75864 691 aa9.45□□□□□ -0.9
DDX39B-207ENST00000427214 AMER1Q5JTC6 1135 aaPredicted RBP9.45□□□□□ -0.9
DDX39B-207ENST00000427214 HS6ST3Q8IZP7 471 aa9.45□□□□□ -0.9
DDX39B-207ENST00000427214 TESK2Q96S53 571 aa9.45□□□□□ -0.9
DDX39B-207ENST00000427214 PCGF6Q9BYE7 350 aa9.45□□□□□ -0.9
DDX39B-207ENST00000427214 CAMTA1Q9Y6Y1 1673 aa9.45□□□□□ -0.9
DDX39B-207ENST00000427214 ST20-MTHFSA0A0A6YYL1 179 aa9.44□□□□□ -0.9
DDX39B-207ENST00000427214 A0A0G2JS52 829 aa9.44□□□□□ -0.9
DDX39B-207ENST00000427214 MYT1Q01538 1121 aa9.44□□□□□ -0.9
DDX39B-207ENST00000427214 KRT27Q7Z3Y8 459 aa9.44□□□□□ -0.9
DDX39B-207ENST00000427214 SPATA31A1Q5TZJ5 1347 aa9.44□□□□□ -0.9
DDX39B-207ENST00000427214 CD163L1Q9NR16 1453 aa9.44□□□□□ -0.9
DDX39B-207ENST00000427214 SLIT3O75094 1523 aa9.44□□□□□ -0.9
DDX39B-207ENST00000427214 PIK3C2AO00443 1686 aa9.44□□□□□ -0.9
DDX39B-207ENST00000427214 LMO7Q8WWI1 1683 aa9.43□□□□□ -0.9
DDX39B-207ENST00000427214 KTN1Q86UP2 1357 aaKnown RBP9.43□□□□□ -0.9
DDX39B-207ENST00000427214 ZBTB7CA1YPR0 619 aa9.43□□□□□ -0.9
DDX39B-207ENST00000427214 ARSIQ5FYB1 569 aa9.43□□□□□ -0.9
DDX39B-207ENST00000427214 VARS2Q5ST30 1063 aaKnown RBP9.43□□□□□ -0.9
DDX39B-207ENST00000427214 LARP1Q6PKG0 1096 aaKnown RBP9.43□□□□□ -0.9
DDX39B-207ENST00000427214 TMC1Q8TDI8 760 aa9.43□□□□□ -0.9
DDX39B-207ENST00000427214 SLC12A5Q9H2X9 1139 aa9.43□□□□□ -0.9
DDX39B-207ENST00000427214 USP35Q9P2H5 1018 aa9.43□□□□□ -0.9
DDX39B-207ENST00000427214 AKAP12Q02952 1782 aa9.42□□□□□ -0.9
DDX39B-207ENST00000427214 EVA1CP58658 441 aa9.42□□□□□ -0.9
DDX39B-207ENST00000427214 FAM182BQ5T319 152 aa9.42□□□□□ -0.9
DDX39B-207ENST00000427214 CCDC125Q86Z20 511 aa9.42□□□□□ -0.9
DDX39B-207ENST00000427214 THSD7AQ9UPZ6 1657 aa9.42□□□□□ -0.9
DDX39B-207ENST00000427214 COL5A2P05997 1499 aaPredicted RBP9.41□□□□□ -0.9
DDX39B-207ENST00000427214 BLMP54132 1417 aaPredicted RBP9.41□□□□□ -0.9
DDX39B-207ENST00000427214 TTC21AQ8NDW8 1320 aa9.41□□□□□ -0.9
DDX39B-207ENST00000427214 DEFB132Q7Z7B7 95 aa9.41□□□□□ -0.9
DDX39B-207ENST00000427214 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.41□□□□□ -0.9
DDX39B-207ENST00000427214 A0A1W2PP64 1363 aa9.4□□□□□ -0.9
DDX39B-207ENST00000427214 AATKQ6ZMQ8 1374 aa9.4□□□□□ -0.9
DDX39B-207ENST00000427214 USP47Q96K76 1375 aa9.4□□□□□ -0.9
DDX39B-207ENST00000427214 MON2Q7Z3U7 1717 aa9.4□□□□□ -0.9
DDX39B-207ENST00000427214 ARHGEF25Q86VW2 580 aa9.4□□□□□ -0.9
DDX39B-207ENST00000427214 NME9Q86XW9 330 aa9.4□□□□□ -0.9
DDX39B-207ENST00000427214 TMC2Q8TDI7 906 aa9.4□□□□□ -0.9
DDX39B-207ENST00000427214 KHSRPQ92945 711 aaKnown RBP eCLIP9.4□□□□□ -0.9
DDX39B-207ENST00000427214 PUS7Q96PZ0 661 aaKnown RBP9.4□□□□□ -0.9
DDX39B-207ENST00000427214 AXIN2Q9Y2T1 843 aa9.4□□□□□ -0.9
DDX39B-207ENST00000427214 USP31Q70CQ4 1352 aa9.39□□□□□ -0.91
DDX39B-207ENST00000427214 CLSPNQ9HAW4 1339 aa9.39□□□□□ -0.91
DDX39B-207ENST00000427214 BARGINQ6ZT62 677 aa9.39□□□□□ -0.91
DDX39B-207ENST00000427214 HDGFL2Q7Z4V5 671 aaPredicted RBP9.39□□□□□ -0.91
DDX39B-207ENST00000427214 TCP11L2Q8N4U5 519 aa9.39□□□□□ -0.91
DDX39B-207ENST00000427214 KCNH5Q8NCM2 988 aa9.39□□□□□ -0.91
DDX39B-207ENST00000427214 NFAT5O94916 1531 aa9.39□□□□□ -0.91
DDX39B-207ENST00000427214 COL18A1P39060 1754 aa9.39□□□□□ -0.91
DDX39B-207ENST00000427214 ZNF687Q8N1G0 1237 aa9.38□□□□□ -0.91
DDX39B-207ENST00000427214 TIMELESSQ9UNS1 1208 aa9.38□□□□□ -0.91
DDX39B-207ENST00000427214 CRB1P82279 1406 aa9.38□□□□□ -0.91
DDX39B-207ENST00000427214 TERF2IPQ9NYB0 399 aa9.37□□□□□ -0.91
DDX39B-207ENST00000427214 EDC4Q6P2E9 1401 aaKnown RBP9.37□□□□□ -0.91
DDX39B-207ENST00000427214 SLC34A2O95436 690 aa9.36□□□□□ -0.91
DDX39B-207ENST00000427214 TMF1P82094 1093 aa9.36□□□□□ -0.91
DDX39B-207ENST00000427214 SF3B2Q13435 895 aaKnown RBP9.36□□□□□ -0.91
DDX39B-207ENST00000427214 TOM1L2Q6ZVM7 507 aa9.36□□□□□ -0.91
DDX39B-207ENST00000427214 THRAP3Q9Y2W1 955 aaKnown RBP9.36□□□□□ -0.91
DDX39B-207ENST00000427214 OVOS2A0A0J9YW53 1432 aa9.36□□□□□ -0.91
DDX39B-207ENST00000427214 OVOS2Q6IE36 1432 aa9.36□□□□□ -0.91
DDX39B-207ENST00000427214 WDR17Q8IZU2 1322 aa9.35□□□□□ -0.91
DDX39B-207ENST00000427214 ZNF316A6NFI3 1004 aaPredicted RBP9.35□□□□□ -0.91
DDX39B-207ENST00000427214 PDE3BQ13370 1112 aa9.35□□□□□ -0.91
DDX39B-207ENST00000427214 CCER1Q8TC90 406 aaPredicted RBP9.35□□□□□ -0.91
DDX39B-207ENST00000427214 RTN4Q9NQC3 1192 aaKnown RBP9.35□□□□□ -0.91
DDX39B-207ENST00000427214 USP54Q70EL1 1684 aa9.35□□□□□ -0.91
DDX39B-207ENST00000427214 NINLQ9Y2I6 1382 aa9.35□□□□□ -0.91
DDX39B-207ENST00000427214 SLC24A1O60721 1099 aa9.34□□□□□ -0.91
DDX39B-207ENST00000427214 TRIM37O94972 964 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms