RNA–Protein interactions for RNA: ENST00000427004.5

PHF1-203, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-203ENST00000427004 U2AF1L5P0DN76 240 aaPredicted RBP20.64■□□□□ 0.89
PHF1-203ENST00000427004 TATP17735 454 aaPredicted RBP20.64■□□□□ 0.89
PHF1-203ENST00000427004 U2AF1Q01081 240 aaKnown RBP eCLIP20.64■□□□□ 0.89
PHF1-203ENST00000427004 DDB1Q16531 1140 aa20.64■□□□□ 0.89
PHF1-203ENST00000427004 DDX54Q8TDD1 881 aaKnown RBP20.64■□□□□ 0.89
PHF1-203ENST00000427004 TNS2Q63HR2 1409 aa20.63■□□□□ 0.89
PHF1-203ENST00000427004 KRT27Q7Z3Y8 459 aa20.63■□□□□ 0.89
PHF1-203ENST00000427004 MIER1Q8N108 512 aa20.63■□□□□ 0.89
PHF1-203ENST00000427004 RAPGEF4Q8WZA2 1011 aa20.63■□□□□ 0.89
PHF1-203ENST00000427004 KAT6BQ8WYB5 2073 aa20.62■□□□□ 0.89
PHF1-203ENST00000427004 PTF1AQ7RTS3 328 aa20.62■□□□□ 0.89
PHF1-203ENST00000427004 SBF2Q86WG5 1849 aa20.61■□□□□ 0.89
PHF1-203ENST00000427004 TOGARAM1Q9Y4F4 1720 aa20.61■□□□□ 0.89
PHF1-203ENST00000427004 KDRP35968 1356 aa20.6■□□□□ 0.89
PHF1-203ENST00000427004 VIRMAQ69YN4 1812 aaKnown RBP20.6■□□□□ 0.89
PHF1-203ENST00000427004 EXOC5O00471 708 aa20.6■□□□□ 0.89
PHF1-203ENST00000427004 PRKAR2BP31323 418 aa20.6■□□□□ 0.89
PHF1-203ENST00000427004 PDE3BQ13370 1112 aa20.6■□□□□ 0.89
PHF1-203ENST00000427004 CCDC146Q8IYE0 955 aa20.6■□□□□ 0.89
PHF1-203ENST00000427004 ZCRB1Q8TBF4 217 aaKnown RBP20.6■□□□□ 0.89
PHF1-203ENST00000427004 PHACTR3Q96KR7 559 aa20.6■□□□□ 0.89
PHF1-203ENST00000427004 RSPH6AQ9H0K4 717 aa20.6■□□□□ 0.89
PHF1-203ENST00000427004 DOT1LQ8TEK3 1739 aa20.6■□□□□ 0.89
PHF1-203ENST00000427004 CYP27B1O15528 508 aa20.59■□□□□ 0.89
PHF1-203ENST00000427004 ACSBG1Q96GR2 724 aa20.59■□□□□ 0.89
PHF1-203ENST00000427004 MRS2Q9HD23 443 aa20.59■□□□□ 0.89
PHF1-203ENST00000427004 NUDCQ9Y266 331 aa20.57■□□□□ 0.88
PHF1-203ENST00000427004 DLG5Q8TDM6 1919 aa20.57■□□□□ 0.88
PHF1-203ENST00000427004 ADAMTS8Q9UP79 889 aa20.56■□□□□ 0.88
PHF1-203ENST00000427004 MTHFSDQ2M296 383 aaKnown RBP20.55■□□□□ 0.88
PHF1-203ENST00000427004 KCNQ2O43526 872 aa20.54■□□□□ 0.88
PHF1-203ENST00000427004 ZNF530Q6P9A1 599 aaPredicted RBP20.54■□□□□ 0.88
PHF1-203ENST00000427004 CDCA7Q9BWT1 371 aaPredicted RBP20.54■□□□□ 0.88
PHF1-203ENST00000427004 ITGB4P16144 1822 aa20.53■□□□□ 0.88
PHF1-203ENST00000427004 TNS1Q9HBL0 1735 aaKnown RBP20.53■□□□□ 0.88
PHF1-203ENST00000427004 TRIM37O94972 964 aa20.52■□□□□ 0.88
PHF1-203ENST00000427004 WDR43Q15061 677 aaKnown RBP eCLIP20.52■□□□□ 0.88
PHF1-203ENST00000427004 EP400Q96L91 3159 aa20.52■□□□□ 0.87
PHF1-203ENST00000427004 PHKG2P15735 406 aa20.51■□□□□ 0.87
PHF1-203ENST00000427004 FAM9BQ8IZU0 186 aa20.51■□□□□ 0.87
PHF1-203ENST00000427004 PLEKHF1Q96S99 279 aa20.51■□□□□ 0.87
PHF1-203ENST00000427004 RRP7AQ9Y3A4 280 aaKnown RBP20.51■□□□□ 0.87
PHF1-203ENST00000427004 PLEKHO1Q53GL0 409 aaPredicted RBP20.5■□□□□ 0.87
PHF1-203ENST00000427004 MPRIPQ6WCQ1 1025 aa20.5■□□□□ 0.87
PHF1-203ENST00000427004 PNISRQ8TF01 805 aaKnown RBP20.5■□□□□ 0.87
PHF1-203ENST00000427004 SPG7Q9UQ90 795 aa20.5■□□□□ 0.87
PHF1-203ENST00000427004 PCDH11XQ9BZA7 1347 aa20.5■□□□□ 0.87
PHF1-203ENST00000427004 PCDH11YQ9BZA8 1340 aa20.5■□□□□ 0.87
PHF1-203ENST00000427004 KDM6AO15550 1401 aaPredicted RBP20.49■□□□□ 0.87
PHF1-203ENST00000427004 SCN11AQ9UI33 1791 aa20.49■□□□□ 0.87
PHF1-203ENST00000427004 BTAF1O14981 1849 aa20.48■□□□□ 0.87
PHF1-203ENST00000427004 NHSQ6T4R5 1651 aa20.48■□□□□ 0.87
PHF1-203ENST00000427004 LGR6Q9HBX8 967 aa20.48■□□□□ 0.87
PHF1-203ENST00000427004 FCHSD2O94868 740 aa20.47■□□□□ 0.87
PHF1-203ENST00000427004 DCTN1Q14203 1278 aa20.47■□□□□ 0.87
PHF1-203ENST00000427004 SYTL4Q96C24 671 aaPredicted RBP20.47■□□□□ 0.87
PHF1-203ENST00000427004 NEUROD2Q15784 382 aa20.46■□□□□ 0.87
PHF1-203ENST00000427004 PRIM1P49642 420 aaKnown RBP20.45■□□□□ 0.86
PHF1-203ENST00000427004 FAM196AQ6ZSG2 479 aa20.45■□□□□ 0.86
PHF1-203ENST00000427004 DEFB132Q7Z7B7 95 aa20.45■□□□□ 0.86
PHF1-203ENST00000427004 IFNL2Q8IZJ0 200 aa20.45■□□□□ 0.86
PHF1-203ENST00000427004 THUMPD2Q9BTF0 503 aaKnown RBP20.44■□□□□ 0.86
PHF1-203ENST00000427004 AMOTQ4VCS5 1084 aa20.43■□□□□ 0.86
PHF1-203ENST00000427004 C1orf141Q5JVX7 400 aa20.43■□□□□ 0.86
PHF1-203ENST00000427004 MCM10Q7L590 875 aa20.42■□□□□ 0.86
PHF1-203ENST00000427004 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.42■□□□□ 0.864e-6■■□□□ 12.6
PHF1-203ENST00000427004 SALL2Q9Y467 1007 aaPredicted RBP20.42■□□□□ 0.86
PHF1-203ENST00000427004 ADAMTS7Q9UKP4 1686 aa20.41■□□□□ 0.86
PHF1-203ENST00000427004 RNMTO43148 476 aaKnown RBP20.4■□□□□ 0.86
PHF1-203ENST00000427004 KCNQ4P56696 695 aa20.4■□□□□ 0.86
PHF1-203ENST00000427004 NKX1-1Q15270 411 aaPredicted RBP20.4■□□□□ 0.86
PHF1-203ENST00000427004 AKAP4Q5JQC9 854 aa20.4■□□□□ 0.86
PHF1-203ENST00000427004 IL17REQ8NFR9 667 aa20.4■□□□□ 0.86
PHF1-203ENST00000427004 MAP3K5Q99683 1374 aa20.4■□□□□ 0.86
PHF1-203ENST00000427004 MAPK8IP3Q9UPT6 1336 aa20.4■□□□□ 0.86
PHF1-203ENST00000427004 APAF1O14727 1248 aa20.39■□□□□ 0.85
PHF1-203ENST00000427004 EN1Q05925 392 aaPredicted RBP20.39■□□□□ 0.85
PHF1-203ENST00000427004 NFE2L2Q16236 605 aa20.39■□□□□ 0.85
PHF1-203ENST00000427004 RUNDC1Q96C34 613 aa20.39■□□□□ 0.85
PHF1-203ENST00000427004 SIPA1L3O60292 1781 aaPredicted RBP20.39■□□□□ 0.85
PHF1-203ENST00000427004 APBA3O96018 575 aa20.38■□□□□ 0.85
PHF1-203ENST00000427004 GAS2L2Q8NHY3 880 aa20.38■□□□□ 0.85
PHF1-203ENST00000427004 PIGBQ92521 554 aa20.38■□□□□ 0.85
PHF1-203ENST00000427004 GNAT3A8MTJ3 354 aa20.37■□□□□ 0.85
PHF1-203ENST00000427004 CCER2I3L3R5 266 aa20.37■□□□□ 0.85
PHF1-203ENST00000427004 TMPOP42166 694 aaKnown RBP20.37■□□□□ 0.85
PHF1-203ENST00000427004 SRCAPQ6ZRS2 3230 aa20.37■□□□□ 0.85
PHF1-203ENST00000427004 RIPK4P57078 832 aa20.36■□□□□ 0.85
PHF1-203ENST00000427004 CCDC125Q86Z20 511 aa20.36■□□□□ 0.85
PHF1-203ENST00000427004 BCL9O00512 1426 aa20.36■□□□□ 0.85
PHF1-203ENST00000427004 EZH2Q15910 746 aaKnown RBP20.35■□□□□ 0.85
PHF1-203ENST00000427004 NFATC2IPQ8NCF5 419 aa20.35■□□□□ 0.85
PHF1-203ENST00000427004 DCAF5Q96JK2 942 aa20.35■□□□□ 0.85
PHF1-203ENST00000427004 BCL11BQ9C0K0 894 aaPredicted RBP20.35■□□□□ 0.85
PHF1-203ENST00000427004 SLC39A6Q13433 755 aa20.34■□□□□ 0.85
PHF1-203ENST00000427004 MIS18AQ9NYP9 233 aa20.34■□□□□ 0.85
PHF1-203ENST00000427004 ASAP1Q9ULH1 1129 aa20.34■□□□□ 0.85
PHF1-203ENST00000427004 KCNQ3O43525 872 aa20.33■□□□□ 0.85
PHF1-203ENST00000427004 CABP4P57796 275 aa20.33■□□□□ 0.85
PHF1-203ENST00000427004 TRIM35Q9UPQ4 493 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms