RNA–Protein interactions for RNA: ENST00000426909.1

SYNC-204, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-204ENST00000426909 HSP90AB2PQ58FF8 381 aa14.52□□□□□ -0.09
SYNC-204ENST00000426909 PEAK1Q9H792 1746 aa14.52□□□□□ -0.09
SYNC-204ENST00000426909 TNS2Q63HR2 1409 aa14.51□□□□□ -0.09
SYNC-204ENST00000426909 RNF123Q5XPI4 1314 aa14.51□□□□□ -0.09
SYNC-204ENST00000426909 ADAMTS8Q9UP79 889 aa14.51□□□□□ -0.09
SYNC-204ENST00000426909 RGPD1P0DJD0 1748 aa14.51□□□□□ -0.09
SYNC-204ENST00000426909 BAG6P46379 1132 aa14.5□□□□□ -0.09
SYNC-204ENST00000426909 POLKQ9UBT6 870 aa14.5□□□□□ -0.09
SYNC-204ENST00000426909 NBPF6Q5VWK0 638 aa14.48□□□□□ -0.09
SYNC-204ENST00000426909 NBPF4Q96M43 638 aa14.48□□□□□ -0.09
SYNC-204ENST00000426909 CFAP53Q96M91 514 aa14.48□□□□□ -0.09
SYNC-204ENST00000426909 TRIM37O94972 964 aa14.47□□□□□ -0.09
SYNC-204ENST00000426909 MARCH10Q8NA82 808 aaPredicted RBP14.47□□□□□ -0.09
SYNC-204ENST00000426909 MAP2P11137 1827 aaKnown RBP14.47□□□□□ -0.09
SYNC-204ENST00000426909 BCL9O00512 1426 aa14.47□□□□□ -0.09
SYNC-204ENST00000426909 DEFB132Q7Z7B7 95 aa14.46□□□□□ -0.09
SYNC-204ENST00000426909 RAPGEF4Q8WZA2 1011 aa14.46□□□□□ -0.09
SYNC-204ENST00000426909 TNS1Q9HBL0 1735 aaKnown RBP14.46□□□□□ -0.1
SYNC-204ENST00000426909 USHBP1Q8N6Y0 703 aa14.45□□□□□ -0.1
SYNC-204ENST00000426909 PPP4R2Q9NY27 417 aa14.45□□□□□ -0.1
SYNC-204ENST00000426909 RGPD2P0DJD1 1756 aa14.45□□□□□ -0.1
SYNC-204ENST00000426909 APBA3O96018 575 aa14.44□□□□□ -0.1
SYNC-204ENST00000426909 TATP17735 454 aaPredicted RBP14.44□□□□□ -0.1
SYNC-204ENST00000426909 NCBP3Q53F19 620 aaKnown RBP14.44□□□□□ -0.1
SYNC-204ENST00000426909 MEGF6O75095 1541 aa14.44□□□□□ -0.1
SYNC-204ENST00000426909 ZNF521Q96K83 1311 aa14.42□□□□□ -0.1
SYNC-204ENST00000426909 EN1Q05925 392 aaPredicted RBP14.42□□□□□ -0.1
SYNC-204ENST00000426909 EIF4A2Q14240 407 aaKnown RBP14.42□□□□□ -0.1
SYNC-204ENST00000426909 ZCRB1Q8TBF4 217 aaKnown RBP14.42□□□□□ -0.1
SYNC-204ENST00000426909 DDX54Q8TDD1 881 aaKnown RBP14.42□□□□□ -0.1
SYNC-204ENST00000426909 BCL11BQ9C0K0 894 aaPredicted RBP14.42□□□□□ -0.1
SYNC-204ENST00000426909 NCAPD2Q15021 1401 aa14.41□□□□□ -0.1
SYNC-204ENST00000426909 EYA1Q99502 592 aa14.41□□□□□ -0.1
SYNC-204ENST00000426909 RCAN3Q9UKA8 241 aa14.41□□□□□ -0.1
SYNC-204ENST00000426909 MTHFSP49914 203 aa14.4□□□□□ -0.1
SYNC-204ENST00000426909 PCDH11XQ9BZA7 1347 aa14.4□□□□□ -0.1
SYNC-204ENST00000426909 PCDH11YQ9BZA8 1340 aa14.4□□□□□ -0.1
SYNC-204ENST00000426909 SBF2Q86WG5 1849 aa14.39□□□□□ -0.11
SYNC-204ENST00000426909 GOLGA2Q08379 1002 aa14.39□□□□□ -0.11
SYNC-204ENST00000426909 PLEKHG2Q9H7P9 1386 aa14.38□□□□□ -0.11
SYNC-204ENST00000426909 PLSCR1O15162 318 aa14.38□□□□□ -0.11
SYNC-204ENST00000426909 EZH2Q15910 746 aaKnown RBP14.38□□□□□ -0.11
SYNC-204ENST00000426909 CAMKK2Q96RR4 588 aa14.38□□□□□ -0.11
SYNC-204ENST00000426909 SPG7Q9UQ90 795 aa14.38□□□□□ -0.11
SYNC-204ENST00000426909 NHSQ6T4R5 1651 aa14.38□□□□□ -0.11
SYNC-204ENST00000426909 IGSF1Q8N6C5 1336 aa14.38□□□□□ -0.11
SYNC-204ENST00000426909 RUNDC1Q96C34 613 aa14.37□□□□□ -0.11
SYNC-204ENST00000426909 ACSBG1Q96GR2 724 aa14.37□□□□□ -0.11
SYNC-204ENST00000426909 SALL2Q9Y467 1007 aaPredicted RBP14.37□□□□□ -0.11
SYNC-204ENST00000426909 SHANK3Q9BYB0 1731 aa14.37□□□□□ -0.11
SYNC-204ENST00000426909 RGPD3A6NKT7 1758 aaPredicted RBP14.37□□□□□ -0.11
SYNC-204ENST00000426909 RGPD4Q7Z3J3 1758 aa14.37□□□□□ -0.11
SYNC-204ENST00000426909 RRP1P56182 461 aaKnown RBP14.36□□□□□ -0.11
SYNC-204ENST00000426909 IRX6P78412 446 aaPredicted RBP14.36□□□□□ -0.11
SYNC-204ENST00000426909 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.36□□□□□ -0.11
SYNC-204ENST00000426909 PKD1L3Q7Z443 1732 aa14.35□□□□□ -0.11
SYNC-204ENST00000426909 APAF1O14727 1248 aa14.35□□□□□ -0.11
SYNC-204ENST00000426909 KCNQ2O43526 872 aa14.35□□□□□ -0.11
SYNC-204ENST00000426909 CDCA7LQ96GN5 454 aa14.35□□□□□ -0.11
SYNC-204ENST00000426909 PNNQ9H307 717 aaKnown RBP14.35□□□□□ -0.11
SYNC-204ENST00000426909 RREB1Q92766 1687 aa14.34□□□□□ -0.11
SYNC-204ENST00000426909 COL3A1P02461 1466 aaPredicted RBP14.34□□□□□ -0.11
SYNC-204ENST00000426909 E9PSI1 815 aa14.34□□□□□ -0.11
SYNC-204ENST00000426909 DIAPH1O60610 1272 aaKnown RBP14.34□□□□□ -0.11
SYNC-204ENST00000426909 IL13P35225 146 aa14.34□□□□□ -0.11
SYNC-204ENST00000426909 SLFN5Q08AF3 891 aa14.34□□□□□ -0.11
SYNC-204ENST00000426909 CCDC27Q2M243 656 aa14.34□□□□□ -0.11
SYNC-204ENST00000426909 PTF1AQ7RTS3 328 aa14.34□□□□□ -0.11
SYNC-204ENST00000426909 TRMT2AQ8IZ69 625 aaKnown RBP14.34□□□□□ -0.11
SYNC-204ENST00000426909 SYTL4Q96C24 671 aaPredicted RBP14.34□□□□□ -0.11
SYNC-204ENST00000426909 DUSP27Q5VZP5 1158 aa14.33□□□□□ -0.12
SYNC-204ENST00000426909 CCDC146Q8IYE0 955 aa14.33□□□□□ -0.12
SYNC-204ENST00000426909 DOT1LQ8TEK3 1739 aa14.32□□□□□ -0.12
SYNC-204ENST00000426909 SENP3-EIF4A1A0A087X0R7 540 aa14.32□□□□□ -0.12
SYNC-204ENST00000426909 CYP27B1O15528 508 aa14.32□□□□□ -0.12
SYNC-204ENST00000426909 NBPF14Q5TI25 921 aa14.32□□□□□ -0.12
SYNC-204ENST00000426909 SULT6B1Q6IMI4 303 aa14.32□□□□□ -0.12
SYNC-204ENST00000426909 KDRP35968 1356 aa14.32□□□□□ -0.12
SYNC-204ENST00000426909 PRIM1P49642 420 aaKnown RBP14.31□□□□□ -0.12
SYNC-204ENST00000426909 AMOTQ4VCS5 1084 aa14.31□□□□□ -0.12
SYNC-204ENST00000426909 PLEKHO1Q53GL0 409 aaPredicted RBP14.31□□□□□ -0.12
SYNC-204ENST00000426909 IFNL2Q8IZJ0 200 aa14.31□□□□□ -0.12
SYNC-204ENST00000426909 NUP188Q5SRE5 1749 aa14.31□□□□□ -0.12
SYNC-204ENST00000426909 BTAF1O14981 1849 aa14.3□□□□□ -0.12
SYNC-204ENST00000426909 AEBP1Q8IUX7 1158 aa14.3□□□□□ -0.12
SYNC-204ENST00000426909 WDR63Q8IWG1 891 aa14.3□□□□□ -0.12
SYNC-204ENST00000426909 U2AF1L5P0DN76 240 aaPredicted RBP14.29□□□□□ -0.12
SYNC-204ENST00000426909 PHKG2P15735 406 aa14.29□□□□□ -0.12
SYNC-204ENST00000426909 U2AF1Q01081 240 aaKnown RBP eCLIP14.29□□□□□ -0.12
SYNC-204ENST00000426909 NKX1-1Q15270 411 aaPredicted RBP14.29□□□□□ -0.12
SYNC-204ENST00000426909 TXNRD1Q16881 649 aa14.29□□□□□ -0.12
SYNC-204ENST00000426909 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.29□□□□□ -0.12
SYNC-204ENST00000426909 U2SURPO15042 1029 aaKnown RBP14.28□□□□□ -0.12
SYNC-204ENST00000426909 HSP90AB1P08238 724 aaKnown RBP14.28□□□□□ -0.12
SYNC-204ENST00000426909 WWC1Q8IX03 1113 aa14.28□□□□□ -0.12
SYNC-204ENST00000426909 PSDA5PKW4 1024 aaPredicted RBP14.27□□□□□ -0.13
SYNC-204ENST00000426909 HMOX1P09601 288 aa14.27□□□□□ -0.13
SYNC-204ENST00000426909 R3HDM1Q15032 1099 aaKnown RBP14.27□□□□□ -0.13
SYNC-204ENST00000426909 C1orf141Q5JVX7 400 aa14.27□□□□□ -0.13
SYNC-204ENST00000426909 PROM2Q8N271 834 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms