RNA–Protein interactions for RNA: ENST00000425718.1

APOE-202, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 923 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-202ENST00000425718 PKD1L3Q7Z443 1732 aa32.05■■■□□ 2.72
APOE-202ENST00000425718 LRRC37A3O60309 1634 aa32.04■■■□□ 2.72
APOE-202ENST00000425718 DDB1Q16531 1140 aa32.04■■■□□ 2.72
APOE-202ENST00000425718 AMOTQ4VCS5 1084 aa32.04■■■□□ 2.72
APOE-202ENST00000425718 TNS2Q63HR2 1409 aa32.03■■■□□ 2.72
APOE-202ENST00000425718 HMOX1P09601 288 aa32.03■■■□□ 2.72
APOE-202ENST00000425718 SEPT12Q8IYM1 358 aa32.03■■■□□ 2.72
APOE-202ENST00000425718 SPG7Q9UQ90 795 aa32.03■■■□□ 2.72
APOE-202ENST00000425718 MEGF6O75095 1541 aa32.03■■■□□ 2.72
APOE-202ENST00000425718 BRWD3Q6RI45 1802 aa32.01■■■□□ 2.72
APOE-202ENST00000425718 PLEKHO1Q53GL0 409 aaPredicted RBP32.01■■■□□ 2.71
APOE-202ENST00000425718 AEBP1Q8IUX7 1158 aa32.01■■■□□ 2.71
APOE-202ENST00000425718 MIER1Q8N108 512 aa32.01■■■□□ 2.71
APOE-202ENST00000425718 ZCRB1Q8TBF4 217 aaKnown RBP32■■■□□ 2.71
APOE-202ENST00000425718 RSPH6AQ9H0K4 717 aa32■■■□□ 2.71
APOE-202ENST00000425718 PDE3BQ13370 1112 aa31.99■■■□□ 2.71
APOE-202ENST00000425718 RGS12O14924 1447 aa31.99■■■□□ 2.71
APOE-202ENST00000425718 PNISRQ8TF01 805 aaKnown RBP31.97■■■□□ 2.71
APOE-202ENST00000425718 PCDH11XQ9BZA7 1347 aa31.97■■■□□ 2.71
APOE-202ENST00000425718 PCDH11YQ9BZA8 1340 aa31.97■■■□□ 2.71
APOE-202ENST00000425718 PRKAR2BP31323 418 aa31.96■■■□□ 2.71
APOE-202ENST00000425718 CCDC184Q52MB2 194 aa31.96■■■□□ 2.71
APOE-202ENST00000425718 MAPK8IP3Q9UPT6 1336 aa31.96■■■□□ 2.71
APOE-202ENST00000425718 SHANK3Q9BYB0 1731 aa31.95■■■□□ 2.7
APOE-202ENST00000425718 GAS2L2Q8NHY3 880 aa31.94■■■□□ 2.7
APOE-202ENST00000425718 KRT27Q7Z3Y8 459 aa31.93■■■□□ 2.7
APOE-202ENST00000425718 ADAMTS8Q9UP79 889 aa31.93■■■□□ 2.7
APOE-202ENST00000425718 KAT6BQ8WYB5 2073 aa31.91■■■□□ 2.7
APOE-202ENST00000425718 HSP90AB1P08238 724 aaKnown RBP31.89■■■□□ 2.7
APOE-202ENST00000425718 C1orf141Q5JVX7 400 aa31.89■■■□□ 2.7
APOE-202ENST00000425718 IFNL2Q8IZJ0 200 aa31.89■■■□□ 2.7
APOE-202ENST00000425718 RUNDC1Q96C34 613 aa31.89■■■□□ 2.7
APOE-202ENST00000425718 ZNF530Q6P9A1 599 aaPredicted RBP31.87■■■□□ 2.69
APOE-202ENST00000425718 PLEKHF1Q96S99 279 aa31.87■■■□□ 2.69
APOE-202ENST00000425718 BCL9O00512 1426 aa31.85■■■□□ 2.69
APOE-202ENST00000425718 DDX54Q8TDD1 881 aaKnown RBP31.85■■■□□ 2.69
APOE-202ENST00000425718 AKAP4Q5JQC9 854 aa31.84■■■□□ 2.69
APOE-202ENST00000425718 FAM9BQ8IZU0 186 aa31.84■■■□□ 2.69
APOE-202ENST00000425718 VIRMAQ69YN4 1812 aaKnown RBP31.84■■■□□ 2.69
APOE-202ENST00000425718 DLG5Q8TDM6 1919 aa31.83■■■□□ 2.69
APOE-202ENST00000425718 MTHFSDQ2M296 383 aaKnown RBP31.82■■■□□ 2.68
APOE-202ENST00000425718 FAM196AQ6ZSG2 479 aa31.82■■■□□ 2.68
APOE-202ENST00000425718 PHKG2P15735 406 aa31.81■■■□□ 2.68
APOE-202ENST00000425718 MARCH10Q8NA82 808 aaPredicted RBP31.81■■■□□ 2.68
APOE-202ENST00000425718 CYP27B1O15528 508 aa31.8■■■□□ 2.68
APOE-202ENST00000425718 NKX1-1Q15270 411 aaPredicted RBP31.8■■■□□ 2.68
APOE-202ENST00000425718 PHACTR3Q96KR7 559 aa31.8■■■□□ 2.68
APOE-202ENST00000425718 NFE2L2Q16236 605 aa31.79■■■□□ 2.68
APOE-202ENST00000425718 SCN11AQ9UI33 1791 aa31.79■■■□□ 2.68
APOE-202ENST00000425718 SBF2Q86WG5 1849 aa31.78■■■□□ 2.68
APOE-202ENST00000425718 HTATSF1O43719 755 aaKnown RBP31.78■■■□□ 2.68
APOE-202ENST00000425718 LMOD3Q0VAK6 560 aa31.78■■■□□ 2.68
APOE-202ENST00000425718 MAP3K5Q99683 1374 aa31.78■■■□□ 2.68
APOE-202ENST00000425718 GNAT3A8MTJ3 354 aa31.77■■■□□ 2.68
APOE-202ENST00000425718 CCDC146Q8IYE0 955 aa31.77■■■□□ 2.68
APOE-202ENST00000425718 DCAF5Q96JK2 942 aa31.77■■■□□ 2.68
APOE-202ENST00000425718 NGEFQ8N5V2 710 aa31.75■■■□□ 2.67
APOE-202ENST00000425718 RTF1Q92541 710 aaKnown RBP31.75■■■□□ 2.67
APOE-202ENST00000425718 NCBP3Q53F19 620 aaKnown RBP31.74■■■□□ 2.67
APOE-202ENST00000425718 DOT1LQ8TEK3 1739 aa31.73■■■□□ 2.67
APOE-202ENST00000425718 TMPOP42166 694 aaKnown RBP31.72■■■□□ 2.67
APOE-202ENST00000425718 ADAMTS7Q9UKP4 1686 aa31.72■■■□□ 2.67
APOE-202ENST00000425718 ITGB4P16144 1822 aa31.71■■■□□ 2.67
APOE-202ENST00000425718 NHSQ6T4R5 1651 aa31.7■■■□□ 2.67
APOE-202ENST00000425718 ERVV-2B6SEH9 535 aa31.7■■■□□ 2.67
APOE-202ENST00000425718 RIPK4P57078 832 aa31.69■■■□□ 2.66
APOE-202ENST00000425718 APAF1O14727 1248 aa31.68■■■□□ 2.66
APOE-202ENST00000425718 TOGARAM1Q9Y4F4 1720 aa31.66■■■□□ 2.66
APOE-202ENST00000425718 RNMTO43148 476 aaKnown RBP31.65■■■□□ 2.66
APOE-202ENST00000425718 MPRIPQ6WCQ1 1025 aa31.65■■■□□ 2.66
APOE-202ENST00000425718 KDM6AO15550 1401 aaPredicted RBP31.65■■■□□ 2.66
APOE-202ENST00000425718 FAM182BQ5T319 152 aa31.64■■■□□ 2.66
APOE-202ENST00000425718 CCDC125Q86Z20 511 aa31.63■■■□□ 2.65
APOE-202ENST00000425718 MRC1P22897 1456 aa31.62■■■□□ 2.65
APOE-202ENST00000425718 CEMIPQ8WUJ3 1361 aa31.62■■■□□ 2.65
APOE-202ENST00000425718 BCL11BQ9C0K0 894 aaPredicted RBP31.62■■■□□ 2.65
APOE-202ENST00000425718 CABP4P57796 275 aa31.61■■■□□ 2.65
APOE-202ENST00000425718 CALD1Q05682 793 aaKnown RBP31.61■■■□□ 2.65
APOE-202ENST00000425718 TEFQ10587 303 aa31.61■■■□□ 2.65
APOE-202ENST00000425718 NEUROD2Q15784 382 aa31.61■■■□□ 2.65
APOE-202ENST00000425718 CCDC27Q2M243 656 aa31.61■■■□□ 2.65
APOE-202ENST00000425718 TMOD3Q9NYL9 352 aa31.61■■■□□ 2.65
APOE-202ENST00000425718 BTAF1O14981 1849 aa31.59■■■□□ 2.65
APOE-202ENST00000425718 SIPA1L3O60292 1781 aaPredicted RBP31.59■■■□□ 2.65
APOE-202ENST00000425718 SF3B2Q13435 895 aaKnown RBP31.59■■■□□ 2.65
APOE-202ENST00000425718 SYTL4Q96C24 671 aaPredicted RBP31.59■■■□□ 2.65
APOE-202ENST00000425718 PRIM1P49642 420 aaKnown RBP31.58■■■□□ 2.65
APOE-202ENST00000425718 ACSBG1Q96GR2 724 aa31.58■■■□□ 2.65
APOE-202ENST00000425718 SLC52A2Q9HAB3 445 aa31.58■■■□□ 2.65
APOE-202ENST00000425718 RRP7AQ9Y3A4 280 aaKnown RBP31.58■■■□□ 2.65
APOE-202ENST00000425718 EP400Q96L91 3159 aa31.58■■■□□ 2.65
APOE-202ENST00000425718 IL17REQ8NFR9 667 aa31.57■■■□□ 2.64
APOE-202ENST00000425718 TNS1Q9HBL0 1735 aaKnown RBP31.56■■■□□ 2.64
APOE-202ENST00000425718 TRIM37O94972 964 aa31.56■■■□□ 2.64
APOE-202ENST00000425718 ILDR2Q71H61 639 aa31.56■■■□□ 2.64
APOE-202ENST00000425718 LGR6Q9HBX8 967 aa31.56■■■□□ 2.64
APOE-202ENST00000425718 MCM10Q7L590 875 aa31.54■■■□□ 2.64
APOE-202ENST00000425718 SMARCC1Q92922 1105 aaPredicted RBP31.53■■■□□ 2.64
APOE-202ENST00000425718 TRIM35Q9UPQ4 493 aa31.53■■■□□ 2.64
APOE-202ENST00000425718 RGPD3A6NKT7 1758 aaPredicted RBP31.53■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms