RNA–Protein interactions for RNA: ENST00000423572.6

SCN5A-205, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN5A, Length 8,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-205ENST00000423572 PARP3Q9Y6F1 533 aa13.03□□□□□ -0.32
SCN5A-205ENST00000423572 GOLGA6L10A6NI86 522 aa13.03□□□□□ -0.32
SCN5A-205ENST00000423572 DZIP1LQ8IYY4 767 aaKnown RBP13.03□□□□□ -0.32
SCN5A-205ENST00000423572 MSH6P52701 1360 aa13.03□□□□□ -0.32
SCN5A-205ENST00000423572 FYCO1Q9BQS8 1478 aa13.02□□□□□ -0.32
SCN5A-205ENST00000423572 ZNF396Q96N95 335 aaPredicted RBP13.02□□□□□ -0.32
SCN5A-205ENST00000423572 CDK19Q9BWU1 502 aa13.02□□□□□ -0.32
SCN5A-205ENST00000423572 TFCP2L1Q9NZI6 479 aa13.02□□□□□ -0.32
SCN5A-205ENST00000423572 GAPVD1Q14C86 1478 aa13.02□□□□□ -0.32
SCN5A-205ENST00000423572 HSP90AB3PQ58FF7 597 aa13.02□□□□□ -0.33
SCN5A-205ENST00000423572 NOC2LQ9Y3T9 749 aaKnown RBP13.02□□□□□ -0.33
SCN5A-205ENST00000423572 SCAPERQ9BY12 1400 aa13.02□□□□□ -0.33
SCN5A-205ENST00000423572 MNS1Q8NEH6 495 aa13.02□□□□□ -0.33
SCN5A-205ENST00000423572 L3MBTL2Q969R5 705 aa13.01□□□□□ -0.33
SCN5A-205ENST00000423572 A0A087WZG4 1122 aa13.01□□□□□ -0.33
SCN5A-205ENST00000423572 PRC1O43663 620 aa13.01□□□□□ -0.33
SCN5A-205ENST00000423572 GIGYF2Q6Y7W6 1299 aaKnown RBP13.01□□□□□ -0.33
SCN5A-205ENST00000423572 STAMBPO95630 424 aa13□□□□□ -0.33
SCN5A-205ENST00000423572 UBA5Q9GZZ9 404 aa13□□□□□ -0.33
SCN5A-205ENST00000423572 TRMT1LQ7Z2T5 733 aaKnown RBP13□□□□□ -0.33
SCN5A-205ENST00000423572 BMS1Q14692 1282 aaKnown RBP13□□□□□ -0.33
SCN5A-205ENST00000423572 MINDY4BA8MYZ0 360 aa13□□□□□ -0.33
SCN5A-205ENST00000423572 CIZ1Q9ULV3 898 aaPredicted RBP13□□□□□ -0.33
SCN5A-205ENST00000423572 RBM26Q5T8P6 1007 aaKnown RBP13□□□□□ -0.33
SCN5A-205ENST00000423572 JAKMIP3Q5VZ66 844 aa12.99□□□□□ -0.33
SCN5A-205ENST00000423572 IPO9Q96P70 1041 aaKnown RBP12.99□□□□□ -0.33
SCN5A-205ENST00000423572 WIZO95785 1651 aa12.99□□□□□ -0.33
SCN5A-205ENST00000423572 ARGLU1Q9NWB6 273 aaPredicted RBP12.99□□□□□ -0.33
SCN5A-205ENST00000423572 STK38Q15208 465 aa12.99□□□□□ -0.33
SCN5A-205ENST00000423572 AKAP2Q9Y2D5 859 aa12.99□□□□□ -0.33
SCN5A-205ENST00000423572 DACH1Q9UI36 760 aa12.99□□□□□ -0.33
SCN5A-205ENST00000423572 GJA3Q9Y6H8 435 aa12.99□□□□□ -0.33
SCN5A-205ENST00000423572 KIF4AO95239 1232 aa12.99□□□□□ -0.33
SCN5A-205ENST00000423572 NBPF6Q5VWK0 638 aa12.99□□□□□ -0.33
SCN5A-205ENST00000423572 NBPF5PQ86XG9 351 aaPredicted RBP12.99□□□□□ -0.33
SCN5A-205ENST00000423572 NBPF4Q96M43 638 aa12.99□□□□□ -0.33
SCN5A-205ENST00000423572 KIF7Q2M1P5 1343 aa12.99□□□□□ -0.33
SCN5A-205ENST00000423572 GNAI2P04899 355 aa12.99□□□□□ -0.33
SCN5A-205ENST00000423572 SYNJ2O15056 1496 aa12.98□□□□□ -0.33
SCN5A-205ENST00000423572 ERCC4Q92889 916 aaPredicted RBP12.98□□□□□ -0.33
SCN5A-205ENST00000423572 CCDC91Q7Z6B0 441 aa12.98□□□□□ -0.33
SCN5A-205ENST00000423572 SLC5A1P13866 664 aa12.98□□□□□ -0.33
SCN5A-205ENST00000423572 SPOUT1Q5T280 376 aaKnown RBP12.98□□□□□ -0.33
SCN5A-205ENST00000423572 RAB34Q9BZG1 259 aa12.98□□□□□ -0.33
SCN5A-205ENST00000423572 STK32BQ9NY57 414 aa12.98□□□□□ -0.33
SCN5A-205ENST00000423572 FAM13BQ9NYF5 915 aa12.98□□□□□ -0.33
SCN5A-205ENST00000423572 PDCP20941 246 aa12.98□□□□□ -0.33
SCN5A-205ENST00000423572 KIF22Q14807 665 aa12.98□□□□□ -0.33
SCN5A-205ENST00000423572 RTEL1-TNFRSF6BF6WH68 1400 aa12.98□□□□□ -0.33
SCN5A-205ENST00000423572 BAG3O95817 575 aa12.98□□□□□ -0.33
SCN5A-205ENST00000423572 BICD1Q96G01 975 aa12.98□□□□□ -0.33
SCN5A-205ENST00000423572 CTNNA3Q9UI47 895 aa12.98□□□□□ -0.33
SCN5A-205ENST00000423572 LMTK3Q96Q04 1460 aa12.97□□□□□ -0.33
SCN5A-205ENST00000423572 CCDC82Q8N4S0 544 aa12.97□□□□□ -0.33
SCN5A-205ENST00000423572 VEZTQ9HBM0 779 aa12.97□□□□□ -0.33
SCN5A-205ENST00000423572 TAX1BP1Q86VP1 789 aa12.97□□□□□ -0.33
SCN5A-205ENST00000423572 TRMT112Q9UI30 125 aaKnown RBP12.97□□□□□ -0.33
SCN5A-205ENST00000423572 COG6Q9Y2V7 657 aa12.97□□□□□ -0.33
SCN5A-205ENST00000423572 CTNNA2P26232 953 aa12.97□□□□□ -0.33
SCN5A-205ENST00000423572 BRDTQ58F21 947 aaPredicted RBP12.97□□□□□ -0.33
SCN5A-205ENST00000423572 GPHNQ9NQX3 736 aaPredicted RBP12.97□□□□□ -0.33
SCN5A-205ENST00000423572 WASF1Q92558 559 aa12.97□□□□□ -0.33
SCN5A-205ENST00000423572 CCDC88BA6NC98 1476 aa12.97□□□□□ -0.33
SCN5A-205ENST00000423572 SLU7O95391 586 aaKnown RBP12.97□□□□□ -0.33
SCN5A-205ENST00000423572 CDC5LQ99459 802 aaKnown RBP12.97□□□□□ -0.33
SCN5A-205ENST00000423572 TTC21AQ8NDW8 1320 aa12.96□□□□□ -0.33
SCN5A-205ENST00000423572 APAF1O14727 1248 aa12.96□□□□□ -0.33
SCN5A-205ENST00000423572 KMT5BQ4FZB7 885 aa12.96□□□□□ -0.33
SCN5A-205ENST00000423572 SULT6B1Q6IMI4 303 aa12.96□□□□□ -0.33
SCN5A-205ENST00000423572 TCIRG1Q13488 830 aa12.96□□□□□ -0.33
SCN5A-205ENST00000423572 CEP57L1Q8IYX8 460 aa12.96□□□□□ -0.33
SCN5A-205ENST00000423572 CCP110O43303 1012 aa12.96□□□□□ -0.33
SCN5A-205ENST00000423572 BAG4O95429 457 aaKnown RBP12.96□□□□□ -0.33
SCN5A-205ENST00000423572 TMEM266Q2M3C6 531 aa12.96□□□□□ -0.34
SCN5A-205ENST00000423572 EAPPQ56P03 285 aaPredicted RBP12.96□□□□□ -0.34
SCN5A-205ENST00000423572 PPP1R42Q7Z4L9 355 aa12.96□□□□□ -0.34
SCN5A-205ENST00000423572 CEBPZQ03701 1054 aaKnown RBP12.95□□□□□ -0.34
SCN5A-205ENST00000423572 SETDB2Q96T68 719 aa12.95□□□□□ -0.34
SCN5A-205ENST00000423572 IFIT5Q13325 482 aaKnown RBP12.95□□□□□ -0.34
SCN5A-205ENST00000423572 RABEP1Q15276 862 aa12.95□□□□□ -0.34
SCN5A-205ENST00000423572 IFT57Q9NWB7 429 aa12.95□□□□□ -0.34
SCN5A-205ENST00000423572 NUCB2P80303 420 aa12.95□□□□□ -0.34
SCN5A-205ENST00000423572 CADPS2Q86UW7 1296 aa12.95□□□□□ -0.34
SCN5A-205ENST00000423572 PRKAG2Q9UGJ0 569 aa12.95□□□□□ -0.34
SCN5A-205ENST00000423572 ARL1P40616 181 aaPredicted RBP12.95□□□□□ -0.34
SCN5A-205ENST00000423572 NLRP5P59047 1200 aa12.95□□□□□ -0.34
SCN5A-205ENST00000423572 FMNL2Q96PY5 1086 aa12.95□□□□□ -0.34
SCN5A-205ENST00000423572 SPTY2D1Q68D10 685 aaPredicted RBP12.95□□□□□ -0.34
SCN5A-205ENST00000423572 PPFIBP1Q86W92 1011 aa12.95□□□□□ -0.34
SCN5A-205ENST00000423572 DDX23Q9BUQ8 820 aaKnown RBP12.94□□□□□ -0.34
SCN5A-205ENST00000423572 SMARCA4P51532 1647 aa12.94□□□□□ -0.34
SCN5A-205ENST00000423572 ARHGEF6Q15052 776 aa12.94□□□□□ -0.34
SCN5A-205ENST00000423572 HOOK3Q86VS8 718 aa12.94□□□□□ -0.34
SCN5A-205ENST00000423572 PUF60Q9UHX1 559 aaKnown RBP12.94□□□□□ -0.34
SCN5A-205ENST00000423572 RBM19Q9Y4C8 960 aaKnown RBP12.94□□□□□ -0.34
SCN5A-205ENST00000423572 CETN1Q12798 172 aa12.94□□□□□ -0.34
SCN5A-205ENST00000423572 ANKRD1Q15327 319 aa12.94□□□□□ -0.34
SCN5A-205ENST00000423572 LRRCC1Q9C099 1032 aa12.94□□□□□ -0.34
SCN5A-205ENST00000423572 RSPH6AQ9H0K4 717 aa12.94□□□□□ -0.34
SCN5A-205ENST00000423572 LRRFIP2Q9Y608 721 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms