RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 ST18O60284 1047 aa15.59■□□□□ 0.09
CTCFL-204ENST00000422869 SDSP20132 328 aa15.59■□□□□ 0.09
CTCFL-204ENST00000422869 POLKQ9UBT6 870 aa15.59■□□□□ 0.09
CTCFL-204ENST00000422869 KIF24Q5T7B8 1368 aa15.59■□□□□ 0.09
CTCFL-204ENST00000422869 MCM5P33992 734 aa15.59■□□□□ 0.09
CTCFL-204ENST00000422869 API5Q9BZZ5 524 aaKnown RBP15.59■□□□□ 0.09
CTCFL-204ENST00000422869 MYO5BQ9ULV0 1848 aa15.58■□□□□ 0.08
CTCFL-204ENST00000422869 PRDM4Q9UKN5 801 aa15.58■□□□□ 0.08
CTCFL-204ENST00000422869 YTHDC2Q9H6S0 1430 aaKnown RBP15.57■□□□□ 0.08
CTCFL-204ENST00000422869 CSPP1Q1MSJ5 1256 aa15.57■□□□□ 0.08
CTCFL-204ENST00000422869 SENP3Q9H4L4 574 aaPredicted RBP15.57■□□□□ 0.08
CTCFL-204ENST00000422869 PRAM1Q96QH2 718 aa15.57■□□□□ 0.08
CTCFL-204ENST00000422869 HDGFL2Q7Z4V5 671 aaPredicted RBP15.56■□□□□ 0.08
CTCFL-204ENST00000422869 ANKRD44Q8N8A2 993 aa15.56■□□□□ 0.08
CTCFL-204ENST00000422869 CCDC39Q9UFE4 941 aa15.56■□□□□ 0.08
CTCFL-204ENST00000422869 DYNC1I1O14576 645 aa15.56■□□□□ 0.08
CTCFL-204ENST00000422869 RGS12O14924 1447 aa15.55■□□□□ 0.08
CTCFL-204ENST00000422869 CABP1Q9NZU7 370 aa15.55■□□□□ 0.08
CTCFL-204ENST00000422869 ASXL2Q76L83 1435 aa15.55■□□□□ 0.08
CTCFL-204ENST00000422869 MLH3Q9UHC1 1453 aa15.54■□□□□ 0.08
CTCFL-204ENST00000422869 SMARCA5O60264 1052 aaPredicted RBP15.54■□□□□ 0.08
CTCFL-204ENST00000422869 ARHGEF40Q8TER5 1519 aa15.54■□□□□ 0.08
CTCFL-204ENST00000422869 POGZQ7Z3K3 1410 aa15.54■□□□□ 0.08
CTCFL-204ENST00000422869 CASC1Q6TDU7 716 aa15.54■□□□□ 0.08
CTCFL-204ENST00000422869 RIMS2Q9UQ26 1411 aa15.54■□□□□ 0.08
CTCFL-204ENST00000422869 CEP85Q6P2H3 762 aa15.54■□□□□ 0.08
CTCFL-204ENST00000422869 SASS6Q6UVJ0 657 aa15.54■□□□□ 0.08
CTCFL-204ENST00000422869 REC8O95072 547 aa15.53■□□□□ 0.08
CTCFL-204ENST00000422869 RNF214Q8ND24 703 aa15.53■□□□□ 0.08
CTCFL-204ENST00000422869 FOXD4L5Q5VV16 416 aaPredicted RBP15.53■□□□□ 0.08
CTCFL-204ENST00000422869 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.53■□□□□ 0.08
CTCFL-204ENST00000422869 FOXD4L4Q8WXT5 416 aaPredicted RBP15.53■□□□□ 0.08
CTCFL-204ENST00000422869 CDK19Q9BWU1 502 aa15.53■□□□□ 0.08
CTCFL-204ENST00000422869 MBD3O95983 291 aa15.52■□□□□ 0.08
CTCFL-204ENST00000422869 IL13P35225 146 aa15.52■□□□□ 0.08
CTCFL-204ENST00000422869 FAM83GA6ND36 823 aa15.52■□□□□ 0.07
CTCFL-204ENST00000422869 IDI1Q13907 227 aa15.52■□□□□ 0.07
CTCFL-204ENST00000422869 ERC2O15083 957 aa15.51■□□□□ 0.07
CTCFL-204ENST00000422869 MTERF4Q7Z6M4 381 aaKnown RBP15.51■□□□□ 0.07
CTCFL-204ENST00000422869 RPAP2Q8IXW5 612 aaPredicted RBP15.51■□□□□ 0.07
CTCFL-204ENST00000422869 TMX3Q96JJ7 454 aa15.51■□□□□ 0.07
CTCFL-204ENST00000422869 EMILIN1Q9Y6C2 1016 aa15.51■□□□□ 0.07
CTCFL-204ENST00000422869 RTL1A6NKG5 1358 aa15.51■□□□□ 0.07
CTCFL-204ENST00000422869 APBB1O00213 710 aa15.51■□□□□ 0.07
CTCFL-204ENST00000422869 TUBGCP6Q96RT7 1819 aa15.51■□□□□ 0.07
CTCFL-204ENST00000422869 MSH6P52701 1360 aa15.51■□□□□ 0.07
CTCFL-204ENST00000422869 BRD1O95696 1058 aa15.51■□□□□ 0.07
CTCFL-204ENST00000422869 CDK12Q9NYV4 1490 aaPredicted RBP15.5■□□□□ 0.07
CTCFL-204ENST00000422869 TMEM131LA2VDJ0 1609 aa15.5■□□□□ 0.07
CTCFL-204ENST00000422869 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.49■□□□□ 0.079e-7■■□□□ 11.8
CTCFL-204ENST00000422869 CPSF1Q10570 1443 aaKnown RBP15.49■□□□□ 0.07
CTCFL-204ENST00000422869 NEK4P51957 841 aa15.49■□□□□ 0.07
CTCFL-204ENST00000422869 DCTN1Q14203 1278 aa15.49■□□□□ 0.07
CTCFL-204ENST00000422869 ATP7BP35670 1465 aa15.49■□□□□ 0.07
CTCFL-204ENST00000422869 LMOD3Q0VAK6 560 aa15.48■□□□□ 0.07
CTCFL-204ENST00000422869 ARID3AQ99856 593 aa15.48■□□□□ 0.07
CTCFL-204ENST00000422869 TSPY26PQ9H489 355 aa15.48■□□□□ 0.07
CTCFL-204ENST00000422869 KRT24Q2M2I5 525 aa15.48■□□□□ 0.07
CTCFL-204ENST00000422869 KIAA2012Q0VF49 1180 aa15.48■□□□□ 0.07
CTCFL-204ENST00000422869 CUL4AQ13619 759 aa15.48■□□□□ 0.07
CTCFL-204ENST00000422869 MEIS3Q99687 375 aa15.48■□□□□ 0.07
CTCFL-204ENST00000422869 SMAP1Q8IYB5 467 aaPredicted RBP15.47■□□□□ 0.07
CTCFL-204ENST00000422869 OSBPL3Q9H4L5 887 aa15.47■□□□□ 0.07
CTCFL-204ENST00000422869 TCHHQ07283 1943 aa15.46■□□□□ 0.07
CTCFL-204ENST00000422869 ALKQ9UM73 1620 aa15.46■□□□□ 0.07
CTCFL-204ENST00000422869 PDE1AP54750 535 aa15.45■□□□□ 0.06
CTCFL-204ENST00000422869 MYRIPQ8NFW9 859 aa15.45■□□□□ 0.06
CTCFL-204ENST00000422869 PTMAP06454 111 aaKnown RBP15.45■□□□□ 0.06
CTCFL-204ENST00000422869 PALD1Q9ULE6 856 aa15.45■□□□□ 0.06
CTCFL-204ENST00000422869 MCM2P49736 904 aa15.45■□□□□ 0.06
CTCFL-204ENST00000422869 GADD45BO75293 160 aaPredicted RBP15.44■□□□□ 0.06
CTCFL-204ENST00000422869 JARID2Q92833 1246 aaPredicted RBP15.44■□□□□ 0.06
CTCFL-204ENST00000422869 INTS4Q96HW7 963 aaKnown RBP15.44■□□□□ 0.06
CTCFL-204ENST00000422869 SLC52A1Q9NWF4 448 aa15.44■□□□□ 0.06
CTCFL-204ENST00000422869 PREX1Q8TCU6 1659 aa15.43■□□□□ 0.06
CTCFL-204ENST00000422869 SYAP1Q96A49 352 aaPredicted RBP15.43■□□□□ 0.06
CTCFL-204ENST00000422869 CCDC94Q9BW85 323 aaPredicted RBP15.43■□□□□ 0.06
CTCFL-204ENST00000422869 ESYT1Q9BSJ8 1104 aa15.43■□□□□ 0.06
CTCFL-204ENST00000422869 ZRANB1Q9UGI0 708 aa15.43■□□□□ 0.06
CTCFL-204ENST00000422869 NME9Q86XW9 330 aa15.42■□□□□ 0.06
CTCFL-204ENST00000422869 GDPD2Q9HCC8 539 aa15.42■□□□□ 0.06
CTCFL-204ENST00000422869 PTPRCP08575 1304 aa15.42■□□□□ 0.06
CTCFL-204ENST00000422869 AATKQ6ZMQ8 1374 aa15.42■□□□□ 0.06
CTCFL-204ENST00000422869 TSHZ3Q63HK5 1081 aa15.42■□□□□ 0.06
CTCFL-204ENST00000422869 PIBF1Q8WXW3 757 aa15.42■□□□□ 0.06
CTCFL-204ENST00000422869 SALL3Q9BXA9 1300 aa15.42■□□□□ 0.06
CTCFL-204ENST00000422869 ZNF710Q8N1W2 664 aa15.42■□□□□ 0.06
CTCFL-204ENST00000422869 ZNF830Q96NB3 372 aaPredicted RBP15.42■□□□□ 0.06
CTCFL-204ENST00000422869 EDC4Q6P2E9 1401 aaKnown RBP15.42■□□□□ 0.06
CTCFL-204ENST00000422869 ZBTB7CA1YPR0 619 aa15.41■□□□□ 0.06
CTCFL-204ENST00000422869 NOL8Q76FK4 1167 aaKnown RBP15.41■□□□□ 0.06
CTCFL-204ENST00000422869 MPNDQ8N594 471 aa15.41■□□□□ 0.06
CTCFL-204ENST00000422869 KIAA0232Q92628 1395 aa15.41■□□□□ 0.06
CTCFL-204ENST00000422869 DIP2CQ9Y2E4 1556 aa15.41■□□□□ 0.06
CTCFL-204ENST00000422869 PHF14O94880 888 aa15.41■□□□□ 0.06
CTCFL-204ENST00000422869 FOXD4L6Q3SYB3 417 aaPredicted RBP15.41■□□□□ 0.06
CTCFL-204ENST00000422869 FOXD4L3Q6VB84 417 aaPredicted RBP15.41■□□□□ 0.06
CTCFL-204ENST00000422869 USP48Q86UV5 1035 aa15.41■□□□□ 0.06
CTCFL-204ENST00000422869 PRDM10Q9NQV6 1147 aa15.41■□□□□ 0.06
CTCFL-204ENST00000422869 RRS1Q15050 365 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms