RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 RNF217Q8TC41 542 aa8.95□□□□□ -0.98
LINC00397-201ENST00000422074 CDCA7Q9BWT1 371 aaPredicted RBP8.95□□□□□ -0.98
LINC00397-201ENST00000422074 RNF144AP50876 292 aaPredicted RBP8.94□□□□□ -0.98
LINC00397-201ENST00000422074 SEMA3FQ13275 785 aa8.94□□□□□ -0.98
LINC00397-201ENST00000422074 TSGA10IPQ3SY00 556 aa8.94□□□□□ -0.98
LINC00397-201ENST00000422074 SLFNL1Q499Z3 407 aa8.94□□□□□ -0.98
LINC00397-201ENST00000422074 FOXD4L5Q5VV16 416 aaPredicted RBP8.94□□□□□ -0.98
LINC00397-201ENST00000422074 CYP2U1Q7Z449 544 aa8.94□□□□□ -0.98
LINC00397-201ENST00000422074 WWC1Q8IX03 1113 aa8.94□□□□□ -0.98
LINC00397-201ENST00000422074 GPC1P35052 558 aa8.93□□□□□ -0.98
LINC00397-201ENST00000422074 RNF135Q8IUD6 432 aa8.93□□□□□ -0.98
LINC00397-201ENST00000422074 SLC16A10Q8TF71 515 aa8.93□□□□□ -0.98
LINC00397-201ENST00000422074 A0A1W2PRU2 124 aa8.92□□□□□ -0.98
LINC00397-201ENST00000422074 FIGNL2A6NMB9 653 aa8.92□□□□□ -0.98
LINC00397-201ENST00000422074 WIPF1O43516 503 aa8.92□□□□□ -0.98
LINC00397-201ENST00000422074 VSIG8P0DPA2 414 aa8.92□□□□□ -0.98
LINC00397-201ENST00000422074 MAP7D1Q3KQU3 841 aa8.92□□□□□ -0.98
LINC00397-201ENST00000422074 FNBP4Q8N3X1 1017 aaPredicted RBP8.92□□□□□ -0.98
LINC00397-201ENST00000422074 POLMQ9NP87 494 aaPredicted RBP8.92□□□□□ -0.98
LINC00397-201ENST00000422074 GNRH1P01148 92 aa8.91□□□□□ -0.98
LINC00397-201ENST00000422074 USP4Q13107 963 aa8.91□□□□□ -0.98
LINC00397-201ENST00000422074 CLN3Q13286 438 aa8.91□□□□□ -0.98
LINC00397-201ENST00000422074 DOLKQ9UPQ8 538 aa8.91□□□□□ -0.98
LINC00397-201ENST00000422074 PPFIA3O75145 1194 aa8.9□□□□□ -0.98
LINC00397-201ENST00000422074 MYCP01106 439 aaPredicted RBP8.9□□□□□ -0.98
LINC00397-201ENST00000422074 PTSQ03393 145 aa8.9□□□□□ -0.98
LINC00397-201ENST00000422074 NFATC2IPQ8NCF5 419 aa8.9□□□□□ -0.98
LINC00397-201ENST00000422074 SLC35F4A4IF30 521 aa8.89□□□□□ -0.99
LINC00397-201ENST00000422074 PLPP7Q8NBV4 271 aa8.89□□□□□ -0.99
LINC00397-201ENST00000422074 IRF7Q92985 503 aa8.89□□□□□ -0.99
LINC00397-201ENST00000422074 SIRT1Q96EB6 747 aa8.89□□□□□ -0.99
LINC00397-201ENST00000422074 HRH3Q9Y5N1 445 aa8.89□□□□□ -0.99
LINC00397-201ENST00000422074 A6NJR5 290 aa8.88□□□□□ -0.99
LINC00397-201ENST00000422074 ADAMTS19Q8TE59 1207 aa8.88□□□□□ -0.99
LINC00397-201ENST00000422074 GRIP2Q9C0E4 1043 aa8.88□□□□□ -0.99
LINC00397-201ENST00000422074 ESF1Q9H501 851 aaKnown RBP8.88□□□□□ -0.99
LINC00397-201ENST00000422074 ERBB4Q15303 1308 aa8.87□□□□□ -0.99
LINC00397-201ENST00000422074 SENP3-EIF4A1A0A087X0R7 540 aa8.87□□□□□ -0.99
LINC00397-201ENST00000422074 LZTS3O60299 673 aaPredicted RBP8.87□□□□□ -0.99
LINC00397-201ENST00000422074 VEGFBP49765 207 aa8.87□□□□□ -0.99
LINC00397-201ENST00000422074 LYSMD3Q7Z3D4 306 aa8.87□□□□□ -0.99
LINC00397-201ENST00000422074 CLUAP1Q96AJ1 413 aa8.87□□□□□ -0.99
LINC00397-201ENST00000422074 XAGE2Q96GT9 111 aa8.87□□□□□ -0.99
LINC00397-201ENST00000422074 POM121CA8CG34 1229 aa8.86□□□□□ -0.99
LINC00397-201ENST00000422074 MEN1O00255 615 aa8.86□□□□□ -0.99
LINC00397-201ENST00000422074 CCDC155Q8N6L0 562 aa8.86□□□□□ -0.99
LINC00397-201ENST00000422074 NANOS1Q8WY41 292 aaKnown RBP8.86□□□□□ -0.99
LINC00397-201ENST00000422074 ESYT1Q9BSJ8 1104 aa8.86□□□□□ -0.99
LINC00397-201ENST00000422074 ARHGEF10LQ9HCE6 1279 aa8.86□□□□□ -0.99
LINC00397-201ENST00000422074 SPATA31C2B4DYI2 1134 aa8.85□□□□□ -0.99
LINC00397-201ENST00000422074 PIK3CDO00329 1044 aa8.85□□□□□ -0.99
LINC00397-201ENST00000422074 IL2RAP01589 272 aa8.85□□□□□ -0.99
LINC00397-201ENST00000422074 PROSER2Q86WR7 435 aaPredicted RBP8.85□□□□□ -0.99
LINC00397-201ENST00000422074 NLRP3Q96P20 1036 aa8.85□□□□□ -0.99
LINC00397-201ENST00000422074 OXLD1Q5BKU9 147 aa8.84□□□□□ -0.99
LINC00397-201ENST00000422074 WDR44Q5JSH3 913 aa8.84□□□□□ -0.99
LINC00397-201ENST00000422074 CNKSR1Q969H4 720 aa8.84□□□□□ -0.99
LINC00397-201ENST00000422074 WASLO00401 505 aaPredicted RBP8.83□□□□□ -1
LINC00397-201ENST00000422074 GMPRP36959 345 aa8.83□□□□□ -1
LINC00397-201ENST00000422074 CENPCQ03188 943 aa8.83□□□□□ -1
LINC00397-201ENST00000422074 ESCO1Q5FWF5 840 aa8.83□□□□□ -1
LINC00397-201ENST00000422074 HDGFL1Q5TGJ6 251 aa8.83□□□□□ -1
LINC00397-201ENST00000422074 ITGA6P23229 1130 aa8.82□□□□□ -1
LINC00397-201ENST00000422074 PRICKLE2Q7Z3G6 844 aa8.82□□□□□ -1
LINC00397-201ENST00000422074 FHDC1Q9C0D6 1143 aaPredicted RBP8.82□□□□□ -1
LINC00397-201ENST00000422074 ETNK1Q9HBU6 452 aa8.82□□□□□ -1
LINC00397-201ENST00000422074 PCDHGA11Q9Y5H2 935 aa8.82□□□□□ -1
LINC00397-201ENST00000422074 SCNN1DP51172 638 aa8.81□□□□□ -1
LINC00397-201ENST00000422074 UCN2Q96RP3 112 aa8.81□□□□□ -1
LINC00397-201ENST00000422074 RAB6BQ9NRW1 208 aa8.81□□□□□ -1
LINC00397-201ENST00000422074 SKIP12755 728 aa8.8□□□□□ -1
LINC00397-201ENST00000422074 SLC27A3Q5K4L6 730 aa8.8□□□□□ -1
LINC00397-201ENST00000422074 NBPF10Q6P3W6 841 aaKnown RBP8.8□□□□□ -1
LINC00397-201ENST00000422074 PLEKHM2Q8IWE5 1019 aa8.8□□□□□ -1
LINC00397-201ENST00000422074 NBPF15Q8N660 670 aa8.8□□□□□ -1
LINC00397-201ENST00000422074 EML3Q32P44 896 aa8.79□□□□□ -1
LINC00397-201ENST00000422074 DYRK1BQ9Y463 629 aa8.79□□□□□ -1
LINC00397-201ENST00000422074 USP17L5A8MUK1 530 aa8.78□□□□□ -1
LINC00397-201ENST00000422074 INHAP05111 366 aa8.78□□□□□ -1
LINC00397-201ENST00000422074 INSM1Q01101 510 aaPredicted RBP8.78□□□□□ -1
LINC00397-201ENST00000422074 POU4F2Q12837 409 aa8.78□□□□□ -1
LINC00397-201ENST00000422074 GPR161Q8N6U8 529 aaKnown RBP8.78□□□□□ -1
LINC00397-201ENST00000422074 GMCL1Q96IK5 515 aa8.78□□□□□ -1
LINC00397-201ENST00000422074 NOD1Q9Y239 953 aa8.78□□□□□ -1
LINC00397-201ENST00000422074 TMEM229AB2RXF0 380 aa8.77□□□□□ -1.01
LINC00397-201ENST00000422074 ATP9BO43861 1147 aa8.77□□□□□ -1.01
LINC00397-201ENST00000422074 STAU1O95793 577 aaKnown RBP8.77□□□□□ -1.01
LINC00397-201ENST00000422074 RHOQP17081 205 aa8.77□□□□□ -1.01
LINC00397-201ENST00000422074 LORP23490 312 aaPredicted RBP8.77□□□□□ -1.01
LINC00397-201ENST00000422074 GDF10P55107 478 aa8.77□□□□□ -1.01
LINC00397-201ENST00000422074 NCOA4Q13772 614 aa8.77□□□□□ -1.01
LINC00397-201ENST00000422074 TBC1D9Q6ZT07 1266 aa8.77□□□□□ -1.01
LINC00397-201ENST00000422074 TAS1R3Q7RTX0 852 aa8.77□□□□□ -1.01
LINC00397-201ENST00000422074 PPARGC1BQ86YN6 1023 aaKnown RBP8.77□□□□□ -1.01
LINC00397-201ENST00000422074 GLMNQ92990 594 aa8.77□□□□□ -1.01
LINC00397-201ENST00000422074 SLC4A9Q96Q91 983 aa8.77□□□□□ -1.01
LINC00397-201ENST00000422074 ZSCAN10Q96SZ4 725 aaPredicted RBP8.77□□□□□ -1.01
LINC00397-201ENST00000422074 CUEDC1Q9NWM3 386 aaPredicted RBP8.76□□□□□ -1.01
LINC00397-201ENST00000422074 SV2AQ7L0J3 742 aa8.75□□□□□ -1.01
LINC00397-201ENST00000422074 USP17L3A6NCW0 530 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms