RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 SMG6Q86US8 1419 aaKnown RBP24.82■■□□□ 1.56
ECHDC3-202ENST00000420401 ATF5Q9Y2D1 282 aaPredicted RBP24.82■■□□□ 1.56
ECHDC3-202ENST00000420401 PROM2Q8N271 834 aa24.81■■□□□ 1.56
ECHDC3-202ENST00000420401 POLKQ9UBT6 870 aa24.81■■□□□ 1.56
ECHDC3-202ENST00000420401 ANKRD26Q9UPS8 1709 aa24.81■■□□□ 1.56
ECHDC3-202ENST00000420401 CHD4Q14839 1912 aa24.78■■□□□ 1.56
ECHDC3-202ENST00000420401 IL2RBP14784 551 aa24.78■■□□□ 1.56
ECHDC3-202ENST00000420401 PTGER2P43116 358 aa24.78■■□□□ 1.56
ECHDC3-202ENST00000420401 TXNRD1Q16881 649 aa24.78■■□□□ 1.56
ECHDC3-202ENST00000420401 EXOC5O00471 708 aa24.77■■□□□ 1.56
ECHDC3-202ENST00000420401 BCL9O00512 1426 aa24.77■■□□□ 1.56
ECHDC3-202ENST00000420401 SLC15A2Q16348 729 aa24.76■■□□□ 1.55
ECHDC3-202ENST00000420401 ZNF784Q8NCA9 323 aaPredicted RBP24.76■■□□□ 1.55
ECHDC3-202ENST00000420401 FAM208AQ9UK61 1670 aaKnown RBP24.75■■□□□ 1.55
ECHDC3-202ENST00000420401 KAT6BQ8WYB5 2073 aa24.75■■□□□ 1.55
ECHDC3-202ENST00000420401 CC2D1BQ5T0F9 858 aaKnown RBP24.75■■□□□ 1.55
ECHDC3-202ENST00000420401 NPC1L1Q9UHC9 1359 aa24.75■■□□□ 1.55
ECHDC3-202ENST00000420401 NBPF6Q5VWK0 638 aa24.74■■□□□ 1.55
ECHDC3-202ENST00000420401 NBPF4Q96M43 638 aa24.74■■□□□ 1.55
ECHDC3-202ENST00000420401 FHDC1Q9C0D6 1143 aaPredicted RBP24.74■■□□□ 1.55
ECHDC3-202ENST00000420401 SYT17Q9BSW7 474 aa24.73■■□□□ 1.55
ECHDC3-202ENST00000420401 MTFR1LQ9H019 292 aa24.72■■□□□ 1.55
ECHDC3-202ENST00000420401 MAP2P11137 1827 aaKnown RBP24.72■■□□□ 1.55
ECHDC3-202ENST00000420401 CNGB1Q14028 1251 aaPredicted RBP24.68■■□□□ 1.54
ECHDC3-202ENST00000420401 USHBP1Q8N6Y0 703 aa24.68■■□□□ 1.54
ECHDC3-202ENST00000420401 TNS2Q63HR2 1409 aa24.68■■□□□ 1.54
ECHDC3-202ENST00000420401 RAPGEF4Q8WZA2 1011 aa24.67■■□□□ 1.54
ECHDC3-202ENST00000420401 UTRNP46939 3433 aa24.67■■□□□ 1.54
ECHDC3-202ENST00000420401 NHSQ6T4R5 1651 aa24.66■■□□□ 1.54
ECHDC3-202ENST00000420401 EIF4A2Q14240 407 aaKnown RBP24.66■■□□□ 1.54
ECHDC3-202ENST00000420401 ACSBG1Q96GR2 724 aa24.66■■□□□ 1.54
ECHDC3-202ENST00000420401 ARXQ96QS3 562 aa24.65■■□□□ 1.54
ECHDC3-202ENST00000420401 SENP3-EIF4A1A0A087X0R7 540 aa24.64■■□□□ 1.54
ECHDC3-202ENST00000420401 TATP17735 454 aaPredicted RBP24.64■■□□□ 1.54
ECHDC3-202ENST00000420401 EYA1Q99502 592 aa24.64■■□□□ 1.54
ECHDC3-202ENST00000420401 MTHFSP49914 203 aa24.63■■□□□ 1.53
ECHDC3-202ENST00000420401 ZCRB1Q8TBF4 217 aaKnown RBP24.63■■□□□ 1.53
ECHDC3-202ENST00000420401 SGIP1Q9BQI5 828 aa24.63■■□□□ 1.53
ECHDC3-202ENST00000420401 RGPD2P0DJD1 1756 aa24.62■■□□□ 1.53
ECHDC3-202ENST00000420401 BTAF1O14981 1849 aa24.61■■□□□ 1.53
ECHDC3-202ENST00000420401 DDX54Q8TDD1 881 aaKnown RBP24.61■■□□□ 1.53
ECHDC3-202ENST00000420401 MEGF6O75095 1541 aa24.61■■□□□ 1.53
ECHDC3-202ENST00000420401 C1QTNF8P60827 252 aa24.59■■□□□ 1.53
ECHDC3-202ENST00000420401 GPR162Q16538 588 aa24.59■■□□□ 1.53
ECHDC3-202ENST00000420401 NCAPD2Q15021 1401 aa24.58■■□□□ 1.53
ECHDC3-202ENST00000420401 DDX10Q13206 875 aaKnown RBP24.57■■□□□ 1.52
ECHDC3-202ENST00000420401 KLHL34Q8N239 644 aa24.56■■□□□ 1.52
ECHDC3-202ENST00000420401 PAPPAQ13219 1627 aa24.56■■□□□ 1.52
ECHDC3-202ENST00000420401 IGSF1Q8N6C5 1336 aa24.56■■□□□ 1.52
ECHDC3-202ENST00000420401 MAP3K5Q99683 1374 aa24.55■■□□□ 1.52
ECHDC3-202ENST00000420401 IL13P35225 146 aa24.55■■□□□ 1.52
ECHDC3-202ENST00000420401 DIAPH1O60610 1272 aaKnown RBP24.53■■□□□ 1.52
ECHDC3-202ENST00000420401 ZNF827Q17R98 1081 aa24.53■■□□□ 1.52
ECHDC3-202ENST00000420401 SPG7Q9UQ90 795 aa24.53■■□□□ 1.52
ECHDC3-202ENST00000420401 PCDH11XQ9BZA7 1347 aa24.53■■□□□ 1.52
ECHDC3-202ENST00000420401 PCDH11YQ9BZA8 1340 aa24.53■■□□□ 1.52
ECHDC3-202ENST00000420401 POLD1P28340 1107 aa24.52■■□□□ 1.52
ECHDC3-202ENST00000420401 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.52■■□□□ 1.52
ECHDC3-202ENST00000420401 PELP1Q8IZL8 1130 aaKnown RBP24.51■■□□□ 1.51
ECHDC3-202ENST00000420401 CFAP53Q96M91 514 aa24.51■■□□□ 1.51
ECHDC3-202ENST00000420401 PPP2R1AP30153 589 aa24.5■■□□□ 1.51
ECHDC3-202ENST00000420401 SLC16A10Q8TF71 515 aa24.5■■□□□ 1.51
ECHDC3-202ENST00000420401 LRRC4BQ9NT99 713 aa24.5■■□□□ 1.51
ECHDC3-202ENST00000420401 PLEKHG2Q9H7P9 1386 aa24.5■■□□□ 1.51
ECHDC3-202ENST00000420401 QSER1Q2KHR3 1735 aa24.49■■□□□ 1.51
ECHDC3-202ENST00000420401 SULT6B1Q6IMI4 303 aa24.49■■□□□ 1.51
ECHDC3-202ENST00000420401 GIGYF1O75420 1035 aaPredicted RBP24.48■■□□□ 1.51
ECHDC3-202ENST00000420401 SLC27A3Q5K4L6 730 aa24.47■■□□□ 1.51
ECHDC3-202ENST00000420401 PLEKHO1Q53GL0 409 aaPredicted RBP24.46■■□□□ 1.51
ECHDC3-202ENST00000420401 AEBP1Q8IUX7 1158 aa24.46■■□□□ 1.51
ECHDC3-202ENST00000420401 AKT1S1Q96B36 256 aa24.46■■□□□ 1.51
ECHDC3-202ENST00000420401 TFCP2L1Q9NZI6 479 aa24.46■■□□□ 1.51
ECHDC3-202ENST00000420401 CYP27B1O15528 508 aa24.45■■□□□ 1.5
ECHDC3-202ENST00000420401 AMOTQ4VCS5 1084 aa24.45■■□□□ 1.5
ECHDC3-202ENST00000420401 KDRP35968 1356 aa24.44■■□□□ 1.5
ECHDC3-202ENST00000420401 ZNF316A6NFI3 1004 aaPredicted RBP24.44■■□□□ 1.5
ECHDC3-202ENST00000420401 RALBP1Q15311 655 aa24.44■■□□□ 1.5
ECHDC3-202ENST00000420401 SYTL4Q96C24 671 aaPredicted RBP24.44■■□□□ 1.5
ECHDC3-202ENST00000420401 SHANK3Q9BYB0 1731 aa24.44■■□□□ 1.5
ECHDC3-202ENST00000420401 PRIM1P49642 420 aaKnown RBP24.43■■□□□ 1.5
ECHDC3-202ENST00000420401 IFNL2Q8IZJ0 200 aa24.43■■□□□ 1.5
ECHDC3-202ENST00000420401 TUBGCP6Q96RT7 1819 aa24.42■■□□□ 1.5
ECHDC3-202ENST00000420401 COL24A1Q17RW2 1714 aa24.42■■□□□ 1.5
ECHDC3-202ENST00000420401 PKD1L3Q7Z443 1732 aa24.42■■□□□ 1.5
ECHDC3-202ENST00000420401 U2SURPO15042 1029 aaKnown RBP24.42■■□□□ 1.5
ECHDC3-202ENST00000420401 NUDCQ9Y266 331 aa24.42■■□□□ 1.5
ECHDC3-202ENST00000420401 COL3A1P02461 1466 aaPredicted RBP24.42■■□□□ 1.5
ECHDC3-202ENST00000420401 PNPLA7Q6ZV29 1317 aa24.41■■□□□ 1.5
ECHDC3-202ENST00000420401 NKX1-1Q15270 411 aaPredicted RBP24.41■■□□□ 1.5
ECHDC3-202ENST00000420401 HMOX1P09601 288 aa24.4■■□□□ 1.5
ECHDC3-202ENST00000420401 PHKG2P15735 406 aa24.4■■□□□ 1.5
ECHDC3-202ENST00000420401 KCNQ4P56696 695 aa24.38■■□□□ 1.49
ECHDC3-202ENST00000420401 MSH5O43196 834 aa24.37■■□□□ 1.49
ECHDC3-202ENST00000420401 HSP90AB1P08238 724 aaKnown RBP24.37■■□□□ 1.49
ECHDC3-202ENST00000420401 ZNF530Q6P9A1 599 aaPredicted RBP24.37■■□□□ 1.49
ECHDC3-202ENST00000420401 DOT1LQ8TEK3 1739 aa24.37■■□□□ 1.49
ECHDC3-202ENST00000420401 GOLGB1Q14789 3259 aaKnown RBP24.37■■□□□ 1.49
ECHDC3-202ENST00000420401 LY75O60449 1722 aa24.36■■□□□ 1.49
ECHDC3-202ENST00000420401 NLGN2Q8NFZ4 835 aa24.36■■□□□ 1.49
ECHDC3-202ENST00000420401 GRIN3BO60391 1043 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms