RNA–Protein interactions for RNA: ENST00000419023.2

VPS45-203, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-203ENST00000419023 ST8SIA5O15466 376 aa9.77□□□□□ -0.85
VPS45-203ENST00000419023 PLPP7Q8NBV4 271 aa9.77□□□□□ -0.85
VPS45-203ENST00000419023 CDCA7Q9BWT1 371 aaPredicted RBP9.77□□□□□ -0.85
VPS45-203ENST00000419023 DOLKQ9UPQ8 538 aa9.77□□□□□ -0.85
VPS45-203ENST00000419023 AXIN1O15169 862 aa9.76□□□□□ -0.85
VPS45-203ENST00000419023 CBLBQ13191 982 aa9.76□□□□□ -0.85
VPS45-203ENST00000419023 CTC1Q2NKJ3 1217 aa9.76□□□□□ -0.85
VPS45-203ENST00000419023 TBC1D9Q6ZT07 1266 aa9.76□□□□□ -0.85
VPS45-203ENST00000419023 CHIC2Q9UKJ5 165 aa9.76□□□□□ -0.85
VPS45-203ENST00000419023 ARHGEF11O15085 1522 aa9.76□□□□□ -0.85
VPS45-203ENST00000419023 WIZO95785 1651 aa9.75□□□□□ -0.85
VPS45-203ENST00000419023 LILRA1O75019 489 aa9.75□□□□□ -0.85
VPS45-203ENST00000419023 SCTRP47872 440 aa9.75□□□□□ -0.85
VPS45-203ENST00000419023 SMCPP49901 116 aaPredicted RBP9.75□□□□□ -0.85
VPS45-203ENST00000419023 AAASQ9NRG9 546 aa9.75□□□□□ -0.85
VPS45-203ENST00000419023 URB2Q14146 1524 aaKnown RBP9.74□□□□□ -0.85
VPS45-203ENST00000419023 MAP7D1Q3KQU3 841 aa9.74□□□□□ -0.85
VPS45-203ENST00000419023 OXLD1Q5BKU9 147 aa9.74□□□□□ -0.85
VPS45-203ENST00000419023 TRAF7Q6Q0C0 670 aa9.74□□□□□ -0.85
VPS45-203ENST00000419023 CRIPAKQ8N1N5 446 aa9.74□□□□□ -0.85
VPS45-203ENST00000419023 NFATC2IPQ8NCF5 419 aa9.74□□□□□ -0.85
VPS45-203ENST00000419023 C1orf115Q9H7X2 142 aa9.74□□□□□ -0.85
VPS45-203ENST00000419023 TFIP11Q9UBB9 837 aaKnown RBP9.74□□□□□ -0.85
VPS45-203ENST00000419023 IFT140Q96RY7 1462 aa9.73□□□□□ -0.85
VPS45-203ENST00000419023 LCE2BO14633 110 aa9.73□□□□□ -0.85
VPS45-203ENST00000419023 ATP9BO43861 1147 aa9.73□□□□□ -0.85
VPS45-203ENST00000419023 ADD1P35611 737 aaKnown RBP9.73□□□□□ -0.85
VPS45-203ENST00000419023 ERVK-9P63128 1117 aa9.73□□□□□ -0.85
VPS45-203ENST00000419023 CC2D2BQ6DHV5 1058 aa9.73□□□□□ -0.85
VPS45-203ENST00000419023 DEPDC4Q8N2C3 294 aa9.73□□□□□ -0.85
VPS45-203ENST00000419023 PPP1R12CQ9BZL4 782 aa9.73□□□□□ -0.85
VPS45-203ENST00000419023 PALM3A6NDB9 673 aaPredicted RBP9.72□□□□□ -0.85
VPS45-203ENST00000419023 USP17L5A8MUK1 530 aa9.72□□□□□ -0.85
VPS45-203ENST00000419023 TRIM52Q96A61 297 aa9.72□□□□□ -0.85
VPS45-203ENST00000419023 ESF1Q9H501 851 aaKnown RBP9.72□□□□□ -0.85
VPS45-203ENST00000419023 DACH1Q9UI36 760 aa9.72□□□□□ -0.85
VPS45-203ENST00000419023 BMP1P13497 986 aa9.71□□□□□ -0.86
VPS45-203ENST00000419023 NCOA4Q13772 614 aa9.71□□□□□ -0.86
VPS45-203ENST00000419023 Q6ZVU0 165 aa9.71□□□□□ -0.86
VPS45-203ENST00000419023 MYCP01106 439 aaPredicted RBP9.7□□□□□ -0.86
VPS45-203ENST00000419023 USP4Q13107 963 aa9.7□□□□□ -0.86
VPS45-203ENST00000419023 EML3Q32P44 896 aa9.7□□□□□ -0.86
VPS45-203ENST00000419023 MEIOBQ8N635 442 aa9.7□□□□□ -0.86
VPS45-203ENST00000419023 AGBL1Q96MI9 1066 aa9.7□□□□□ -0.86
VPS45-203ENST00000419023 USP17L3A6NCW0 530 aa9.69□□□□□ -0.86
VPS45-203ENST00000419023 USP17L4A6NCW7 530 aa9.69□□□□□ -0.86
VPS45-203ENST00000419023 USP17L2Q6R6M4 530 aa9.69□□□□□ -0.86
VPS45-203ENST00000419023 USP17L1Q7RTZ2 530 aa9.69□□□□□ -0.86
VPS45-203ENST00000419023 CCDC97Q96F63 343 aaPredicted RBP9.69□□□□□ -0.86
VPS45-203ENST00000419023 OSBPL3Q9H4L5 887 aa9.69□□□□□ -0.86
VPS45-203ENST00000419023 MAFBQ9Y5Q3 323 aaPredicted RBP9.69□□□□□ -0.86
VPS45-203ENST00000419023 ZNF608Q9ULD9 1512 aaPredicted RBP9.68□□□□□ -0.86
VPS45-203ENST00000419023 ADH1AP07327 375 aa9.68□□□□□ -0.86
VPS45-203ENST00000419023 LMOD1P29536 600 aaPredicted RBP9.68□□□□□ -0.86
VPS45-203ENST00000419023 RELBQ01201 579 aa9.68□□□□□ -0.86
VPS45-203ENST00000419023 MRPL14Q6P1L8 145 aaKnown RBP9.68□□□□□ -0.86
VPS45-203ENST00000419023 TRIM46Q7Z4K8 759 aa9.68□□□□□ -0.86
VPS45-203ENST00000419023 CCDC82Q8N4S0 544 aa9.68□□□□□ -0.86
VPS45-203ENST00000419023 SIRT1Q96EB6 747 aa9.68□□□□□ -0.86
VPS45-203ENST00000419023 LZTS3O60299 673 aaPredicted RBP9.67□□□□□ -0.86
VPS45-203ENST00000419023 CFAP70Q5T0N1 1121 aa9.67□□□□□ -0.86
VPS45-203ENST00000419023 PLEKHM2Q8IWE5 1019 aa9.67□□□□□ -0.86
VPS45-203ENST00000419023 LINC00528Q8N1L1 170 aa9.67□□□□□ -0.86
VPS45-203ENST00000419023 ATP13A2Q9NQ11 1180 aa9.67□□□□□ -0.86
VPS45-203ENST00000419023 SERPINA10Q9UK55 444 aa9.67□□□□□ -0.86
VPS45-203ENST00000419023 ABCC8Q09428 1581 aa9.67□□□□□ -0.86
VPS45-203ENST00000419023 ATP5J2-PTCD1G3V325 749 aa9.66□□□□□ -0.86
VPS45-203ENST00000419023 UPP2O95045 317 aa9.66□□□□□ -0.86
VPS45-203ENST00000419023 RFX1P22670 979 aa9.66□□□□□ -0.86
VPS45-203ENST00000419023 C6orf118Q5T5N4 469 aa9.66□□□□□ -0.86
VPS45-203ENST00000419023 CYP2U1Q7Z449 544 aa9.66□□□□□ -0.86
VPS45-203ENST00000419023 KDF1Q8NAX2 398 aaPredicted RBP9.66□□□□□ -0.86
VPS45-203ENST00000419023 PURBQ96QR8 312 aaKnown RBP9.66□□□□□ -0.86
VPS45-203ENST00000419023 TSEN34Q9BSV6 310 aaKnown RBP9.66□□□□□ -0.86
VPS45-203ENST00000419023 NOD1Q9Y239 953 aa9.66□□□□□ -0.86
VPS45-203ENST00000419023 BMP2P12643 396 aa9.65□□□□□ -0.86
VPS45-203ENST00000419023 ZNF395Q9H8N7 513 aaPredicted RBP9.65□□□□□ -0.86
VPS45-203ENST00000419023 RSF1Q96T23 1441 aaPredicted RBP9.65□□□□□ -0.87
VPS45-203ENST00000419023 PTGIRP43119 386 aa9.64□□□□□ -0.87
VPS45-203ENST00000419023 SCARF1Q14162 830 aa9.64□□□□□ -0.87
VPS45-203ENST00000419023 MKRN1Q9UHC7 482 aaKnown RBP9.64□□□□□ -0.87
VPS45-203ENST00000419023 TOP2AP11388 1531 aaKnown RBP9.64□□□□□ -0.87
VPS45-203ENST00000419023 GTF2IP78347 998 aa9.63□□□□□ -0.87
VPS45-203ENST00000419023 ZFP42Q96MM3 310 aa9.63□□□□□ -0.87
VPS45-203ENST00000419023 ARAP1Q96P48 1450 aa9.63□□□□□ -0.87
VPS45-203ENST00000419023 TOPBP1Q92547 1522 aa9.62□□□□□ -0.87
VPS45-203ENST00000419023 STAU1O95793 577 aaKnown RBP9.62□□□□□ -0.87
VPS45-203ENST00000419023 ARID3AQ99856 593 aa9.62□□□□□ -0.87
VPS45-203ENST00000419023 ARHGEF10LQ9HCE6 1279 aa9.62□□□□□ -0.87
VPS45-203ENST00000419023 RAB6BQ9NRW1 208 aa9.62□□□□□ -0.87
VPS45-203ENST00000419023 GMPR2Q9P2T1 348 aaKnown RBP9.62□□□□□ -0.87
VPS45-203ENST00000419023 A0A1W2PRU2 124 aa9.61□□□□□ -0.87
VPS45-203ENST00000419023 GNRH1P01148 92 aa9.61□□□□□ -0.87
VPS45-203ENST00000419023 CDCA8Q53HL2 280 aa9.61□□□□□ -0.87
VPS45-203ENST00000419023 KANK4Q5T7N3 995 aaPredicted RBP9.61□□□□□ -0.87
VPS45-203ENST00000419023 TRIM50Q86XT4 487 aa9.61□□□□□ -0.87
VPS45-203ENST00000419023 CHMP7Q8WUX9 453 aaPredicted RBP9.61□□□□□ -0.87
VPS45-203ENST00000419023 PCDHGA11Q9Y5H2 935 aa9.61□□□□□ -0.87
VPS45-203ENST00000419023 SPINT1O43278 529 aa9.6□□□□□ -0.87
VPS45-203ENST00000419023 PSME1Q06323 249 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms