RNA–Protein interactions for RNA: ENST00000419021.1

SEC61A2-208, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 5

Gene SEC61A2, Length 778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-208ENST00000419021 MARCH10Q8NA82 808 aaPredicted RBP13.53□□□□□ -0.24
SEC61A2-208ENST00000419021 RSPH6AQ9H0K4 717 aa13.53□□□□□ -0.24
SEC61A2-208ENST00000419021 ANP32CO43423 234 aa13.52□□□□□ -0.25
SEC61A2-208ENST00000419021 SULT6B1Q6IMI4 303 aa13.52□□□□□ -0.25
SEC61A2-208ENST00000419021 DOT1LQ8TEK3 1739 aa13.52□□□□□ -0.25
SEC61A2-208ENST00000419021 ITGB4P16144 1822 aa13.51□□□□□ -0.25
SEC61A2-208ENST00000419021 SCN11AQ9UI33 1791 aa13.51□□□□□ -0.25
SEC61A2-208ENST00000419021 NHSQ6T4R5 1651 aa13.51□□□□□ -0.25
SEC61A2-208ENST00000419021 DDB1Q16531 1140 aa13.51□□□□□ -0.25
SEC61A2-208ENST00000419021 KRT27Q7Z3Y8 459 aa13.51□□□□□ -0.25
SEC61A2-208ENST00000419021 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.51□□□□□ -0.25
SEC61A2-208ENST00000419021 CYP27B1O15528 508 aa13.5□□□□□ -0.25
SEC61A2-208ENST00000419021 HMOX1P09601 288 aa13.5□□□□□ -0.25
SEC61A2-208ENST00000419021 RAPGEF4Q8WZA2 1011 aa13.5□□□□□ -0.25
SEC61A2-208ENST00000419021 KAT6BQ8WYB5 2073 aa13.49□□□□□ -0.25
SEC61A2-208ENST00000419021 TATP17735 454 aaPredicted RBP13.49□□□□□ -0.25
SEC61A2-208ENST00000419021 DIEXFQ68CQ4 756 aaKnown RBP13.49□□□□□ -0.25
SEC61A2-208ENST00000419021 PLEKHF1Q96S99 279 aa13.49□□□□□ -0.25
SEC61A2-208ENST00000419021 EXOC5O00471 708 aa13.48□□□□□ -0.25
SEC61A2-208ENST00000419021 U2SURPO15042 1029 aaKnown RBP13.48□□□□□ -0.25
SEC61A2-208ENST00000419021 FAM182BQ5T319 152 aa13.48□□□□□ -0.25
SEC61A2-208ENST00000419021 ZCRB1Q8TBF4 217 aaKnown RBP13.48□□□□□ -0.25
SEC61A2-208ENST00000419021 SIPA1L3O60292 1781 aaPredicted RBP13.48□□□□□ -0.25
SEC61A2-208ENST00000419021 KDM6AO15550 1401 aaPredicted RBP13.47□□□□□ -0.25
SEC61A2-208ENST00000419021 FCHSD2O94868 740 aa13.47□□□□□ -0.25
SEC61A2-208ENST00000419021 U2AF1L5P0DN76 240 aaPredicted RBP13.47□□□□□ -0.25
SEC61A2-208ENST00000419021 U2AF1Q01081 240 aaKnown RBP eCLIP13.47□□□□□ -0.25
SEC61A2-208ENST00000419021 PNISRQ8TF01 805 aaKnown RBP13.47□□□□□ -0.25
SEC61A2-208ENST00000419021 PHACTR3Q96KR7 559 aa13.47□□□□□ -0.25
SEC61A2-208ENST00000419021 NUDCQ9Y266 331 aa13.47□□□□□ -0.25
SEC61A2-208ENST00000419021 BTAF1O14981 1849 aa13.47□□□□□ -0.25
SEC61A2-208ENST00000419021 PCDH11XQ9BZA7 1347 aa13.46□□□□□ -0.25
SEC61A2-208ENST00000419021 PCDH11YQ9BZA8 1340 aa13.46□□□□□ -0.25
SEC61A2-208ENST00000419021 PRKAR2BP31323 418 aa13.46□□□□□ -0.25
SEC61A2-208ENST00000419021 NKX1-1Q15270 411 aaPredicted RBP13.46□□□□□ -0.25
SEC61A2-208ENST00000419021 MRC1P22897 1456 aa13.46□□□□□ -0.25
SEC61A2-208ENST00000419021 RGPD3A6NKT7 1758 aaPredicted RBP13.45□□□□□ -0.26
SEC61A2-208ENST00000419021 RGPD4Q7Z3J3 1758 aa13.45□□□□□ -0.26
SEC61A2-208ENST00000419021 A0A0G2JS52 829 aa13.45□□□□□ -0.26
SEC61A2-208ENST00000419021 PHKG2P15735 406 aa13.45□□□□□ -0.26
SEC61A2-208ENST00000419021 MYT1Q01538 1121 aa13.45□□□□□ -0.26
SEC61A2-208ENST00000419021 PDE3BQ13370 1112 aa13.44□□□□□ -0.26
SEC61A2-208ENST00000419021 MTHFSDQ2M296 383 aaKnown RBP13.44□□□□□ -0.26
SEC61A2-208ENST00000419021 AMOTQ4VCS5 1084 aa13.44□□□□□ -0.26
SEC61A2-208ENST00000419021 PTF1AQ7RTS3 328 aa13.44□□□□□ -0.26
SEC61A2-208ENST00000419021 ADAMTS8Q9UP79 889 aa13.44□□□□□ -0.26
SEC61A2-208ENST00000419021 SPG7Q9UQ90 795 aa13.44□□□□□ -0.26
SEC61A2-208ENST00000419021 PAPPAQ13219 1627 aa13.43□□□□□ -0.26
SEC61A2-208ENST00000419021 CCER2I3L3R5 266 aa13.43□□□□□ -0.26
SEC61A2-208ENST00000419021 PLEKHO1Q53GL0 409 aaPredicted RBP13.43□□□□□ -0.26
SEC61A2-208ENST00000419021 FAM196AQ6ZSG2 479 aa13.43□□□□□ -0.26
SEC61A2-208ENST00000419021 MIER1Q8N108 512 aa13.43□□□□□ -0.26
SEC61A2-208ENST00000419021 MRS2Q9HD23 443 aa13.43□□□□□ -0.26
SEC61A2-208ENST00000419021 ZNF530Q6P9A1 599 aaPredicted RBP13.42□□□□□ -0.26
SEC61A2-208ENST00000419021 DDX54Q8TDD1 881 aaKnown RBP13.42□□□□□ -0.26
SEC61A2-208ENST00000419021 LY75O60449 1722 aa13.42□□□□□ -0.26
SEC61A2-208ENST00000419021 RREB1Q92766 1687 aa13.41□□□□□ -0.26
SEC61A2-208ENST00000419021 IFNL2Q8IZJ0 200 aa13.41□□□□□ -0.26
SEC61A2-208ENST00000419021 UPF1Q92900 1129 aaKnown RBP eCLIP13.41□□□□□ -0.26
SEC61A2-208ENST00000419021 CEMIPQ8WUJ3 1361 aa13.4□□□□□ -0.26
SEC61A2-208ENST00000419021 MAP3K5Q99683 1374 aa13.4□□□□□ -0.26
SEC61A2-208ENST00000419021 UBR2Q8IWV8 1755 aa13.4□□□□□ -0.26
SEC61A2-208ENST00000419021 KCNQ2O43526 872 aa13.39□□□□□ -0.27
SEC61A2-208ENST00000419021 WDR43Q15061 677 aaKnown RBP eCLIP13.39□□□□□ -0.27
SEC61A2-208ENST00000419021 AKAP4Q5JQC9 854 aa13.39□□□□□ -0.27
SEC61A2-208ENST00000419021 NFE2L2Q16236 605 aa13.38□□□□□ -0.27
SEC61A2-208ENST00000419021 GAS2L2Q8NHY3 880 aa13.38□□□□□ -0.27
SEC61A2-208ENST00000419021 CICQ96RK0 1608 aaPredicted RBP13.38□□□□□ -0.27
SEC61A2-208ENST00000419021 NUP188Q5SRE5 1749 aa13.37□□□□□ -0.27
SEC61A2-208ENST00000419021 TRIM37O94972 964 aa13.37□□□□□ -0.27
SEC61A2-208ENST00000419021 CCDC146Q8IYE0 955 aa13.37□□□□□ -0.27
SEC61A2-208ENST00000419021 IL17REQ8NFR9 667 aa13.37□□□□□ -0.27
SEC61A2-208ENST00000419021 RUNDC1Q96C34 613 aa13.37□□□□□ -0.27
SEC61A2-208ENST00000419021 DCAF5Q96JK2 942 aa13.37□□□□□ -0.27
SEC61A2-208ENST00000419021 BCL11BQ9C0K0 894 aaPredicted RBP13.37□□□□□ -0.27
SEC61A2-208ENST00000419021 LGR6Q9HBX8 967 aa13.37□□□□□ -0.27
SEC61A2-208ENST00000419021 KDM3BQ7LBC6 1761 aa13.37□□□□□ -0.27
SEC61A2-208ENST00000419021 ZNF831Q5JPB2 1677 aa13.37□□□□□ -0.27
SEC61A2-208ENST00000419021 TAF1LQ8IZX4 1826 aa13.36□□□□□ -0.27
SEC61A2-208ENST00000419021 RNMTO43148 476 aaKnown RBP13.36□□□□□ -0.27
SEC61A2-208ENST00000419021 TMPOP42166 694 aaKnown RBP13.36□□□□□ -0.27
SEC61A2-208ENST00000419021 MPRIPQ6WCQ1 1025 aa13.36□□□□□ -0.27
SEC61A2-208ENST00000419021 ACSBG1Q96GR2 724 aa13.36□□□□□ -0.27
SEC61A2-208ENST00000419021 ERVV-2B6SEH9 535 aa13.35□□□□□ -0.27
SEC61A2-208ENST00000419021 SOCS7O14512 581 aa13.35□□□□□ -0.27
SEC61A2-208ENST00000419021 HSP90AB1P08238 724 aaKnown RBP13.35□□□□□ -0.27
SEC61A2-208ENST00000419021 PRIM1P49642 420 aaKnown RBP13.35□□□□□ -0.27
SEC61A2-208ENST00000419021 C1orf141Q5JVX7 400 aa13.35□□□□□ -0.27
SEC61A2-208ENST00000419021 GNAT3A8MTJ3 354 aa13.34□□□□□ -0.27
SEC61A2-208ENST00000419021 PIGBQ92521 554 aa13.34□□□□□ -0.27
SEC61A2-208ENST00000419021 PNNQ9H307 717 aaKnown RBP13.34□□□□□ -0.27
SEC61A2-208ENST00000419021 TRIM35Q9UPQ4 493 aa13.34□□□□□ -0.27
SEC61A2-208ENST00000419021 KCPQ6ZWJ8 1503 aa13.34□□□□□ -0.27
SEC61A2-208ENST00000419021 HTATSF1O43719 755 aaKnown RBP13.33□□□□□ -0.28
SEC61A2-208ENST00000419021 CCDC125Q86Z20 511 aa13.33□□□□□ -0.28
SEC61A2-208ENST00000419021 MAPK8IP3Q9UPT6 1336 aa13.33□□□□□ -0.28
SEC61A2-208ENST00000419021 COL5A3P25940 1745 aaPredicted RBP13.33□□□□□ -0.28
SEC61A2-208ENST00000419021 TJP1Q07157 1748 aa13.33□□□□□ -0.28
SEC61A2-208ENST00000419021 APAF1O14727 1248 aa13.32□□□□□ -0.28
SEC61A2-208ENST00000419021 PROM2Q8N271 834 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms