RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 FAM212AQ96EL1 285 aa14.44□□□□□ -0.1
RFC1-203ENST00000418436 THRAP3Q9Y2W1 955 aaKnown RBP14.44□□□□□ -0.1
RFC1-203ENST00000418436 PEAK1Q9H792 1746 aa14.44□□□□□ -0.1
RFC1-203ENST00000418436 WNK3Q9BYP7 1800 aa14.43□□□□□ -0.1
RFC1-203ENST00000418436 KLHL34Q8N239 644 aa14.43□□□□□ -0.1
RFC1-203ENST00000418436 TCP11L2Q8N4U5 519 aa14.43□□□□□ -0.1
RFC1-203ENST00000418436 DCBLD2Q96PD2 775 aa14.43□□□□□ -0.1
RFC1-203ENST00000418436 KNSTRNQ9Y448 316 aa14.43□□□□□ -0.1
RFC1-203ENST00000418436 RTL1A6NKG5 1358 aa14.43□□□□□ -0.1
RFC1-203ENST00000418436 KIF24Q5T7B8 1368 aa14.43□□□□□ -0.1
RFC1-203ENST00000418436 FAM208AQ9UK61 1670 aaKnown RBP14.42□□□□□ -0.1
RFC1-203ENST00000418436 ERBB3P21860 1342 aa14.42□□□□□ -0.1
RFC1-203ENST00000418436 HOXC9P31274 260 aa14.42□□□□□ -0.1
RFC1-203ENST00000418436 RRS1Q15050 365 aaKnown RBP14.42□□□□□ -0.1
RFC1-203ENST00000418436 AMER1Q5JTC6 1135 aaPredicted RBP14.42□□□□□ -0.1
RFC1-203ENST00000418436 TOM1L2Q6ZVM7 507 aa14.42□□□□□ -0.1
RFC1-203ENST00000418436 KIF12Q96FN5 646 aa14.42□□□□□ -0.1
RFC1-203ENST00000418436 MS4A3Q96HJ5 214 aa14.42□□□□□ -0.1
RFC1-203ENST00000418436 CARD10Q9BWT7 1032 aa14.42□□□□□ -0.1
RFC1-203ENST00000418436 PARP4Q9UKK3 1724 aaKnown RBP14.41□□□□□ -0.1
RFC1-203ENST00000418436 ANKRD24Q8TF21 1146 aa14.41□□□□□ -0.1
RFC1-203ENST00000418436 USP35Q9P2H5 1018 aa14.41□□□□□ -0.1
RFC1-203ENST00000418436 CSB-PGBD3P0DP91 1061 aa14.4□□□□□ -0.1
RFC1-203ENST00000418436 AMPHP49418 695 aa14.4□□□□□ -0.1
RFC1-203ENST00000418436 RGPD2P0DJD1 1756 aa14.39□□□□□ -0.11
RFC1-203ENST00000418436 INSRP06213 1382 aa14.38□□□□□ -0.11
RFC1-203ENST00000418436 FLT4P35916 1363 aa14.38□□□□□ -0.11
RFC1-203ENST00000418436 NPC1L1Q9UHC9 1359 aa14.38□□□□□ -0.11
RFC1-203ENST00000418436 KRT27Q7Z3Y8 459 aa14.38□□□□□ -0.11
RFC1-203ENST00000418436 UPF1Q92900 1129 aaKnown RBP eCLIP14.38□□□□□ -0.11
RFC1-203ENST00000418436 POLKQ9UBT6 870 aa14.38□□□□□ -0.11
RFC1-203ENST00000418436 EMILIN1Q9Y6C2 1016 aa14.38□□□□□ -0.11
RFC1-203ENST00000418436 DISP2A7MBM2 1401 aa14.38□□□□□ -0.11
RFC1-203ENST00000418436 HSP90AB2PQ58FF8 381 aa14.37□□□□□ -0.11
RFC1-203ENST00000418436 IFNLR1Q8IU57 520 aaPredicted RBP14.37□□□□□ -0.11
RFC1-203ENST00000418436 LRRC37A3O60309 1634 aa14.37□□□□□ -0.11
RFC1-203ENST00000418436 SMG6Q86US8 1419 aaKnown RBP14.36□□□□□ -0.11
RFC1-203ENST00000418436 A0A0G2JS52 829 aa14.36□□□□□ -0.11
RFC1-203ENST00000418436 MYT1Q01538 1121 aa14.36□□□□□ -0.11
RFC1-203ENST00000418436 MORC1Q86VD1 984 aa14.36□□□□□ -0.11
RFC1-203ENST00000418436 CDCA7Q9BWT1 371 aaPredicted RBP14.36□□□□□ -0.11
RFC1-203ENST00000418436 NLRP2Q9NX02 1062 aa14.36□□□□□ -0.11
RFC1-203ENST00000418436 EP400Q96L91 3159 aa14.35□□□□□ -0.11
RFC1-203ENST00000418436 LTV1Q96GA3 475 aaPredicted RBP14.35□□□□□ -0.11
RFC1-203ENST00000418436 MAP3K13O43283 966 aa14.34□□□□□ -0.11
RFC1-203ENST00000418436 TNNT2P45379 298 aaPredicted RBP14.34□□□□□ -0.11
RFC1-203ENST00000418436 PPM1GO15355 546 aaPredicted RBP14.32□□□□□ -0.12
RFC1-203ENST00000418436 PDE3BQ13370 1112 aa14.32□□□□□ -0.12
RFC1-203ENST00000418436 DDB1Q16531 1140 aa14.32□□□□□ -0.12
RFC1-203ENST00000418436 CC2D1BQ5T0F9 858 aaKnown RBP14.32□□□□□ -0.12
RFC1-203ENST00000418436 NBPF6Q5VWK0 638 aa14.32□□□□□ -0.12
RFC1-203ENST00000418436 NBPF4Q96M43 638 aa14.32□□□□□ -0.12
RFC1-203ENST00000418436 IL2RBP14784 551 aa14.31□□□□□ -0.12
RFC1-203ENST00000418436 DCAF8Q5TAQ9 597 aa14.31□□□□□ -0.12
RFC1-203ENST00000418436 CCDC125Q86Z20 511 aa14.31□□□□□ -0.12
RFC1-203ENST00000418436 NCAPD2Q15021 1401 aa14.31□□□□□ -0.12
RFC1-203ENST00000418436 FAM182BQ5T319 152 aa14.3□□□□□ -0.12
RFC1-203ENST00000418436 SGIP1Q9BQI5 828 aa14.3□□□□□ -0.12
RFC1-203ENST00000418436 TNS2Q63HR2 1409 aa14.3□□□□□ -0.12
RFC1-203ENST00000418436 SBF2Q86WG5 1849 aa14.29□□□□□ -0.12
RFC1-203ENST00000418436 EXOC5O00471 708 aa14.29□□□□□ -0.12
RFC1-203ENST00000418436 FAM196AQ6ZSG2 479 aa14.29□□□□□ -0.12
RFC1-203ENST00000418436 SPOCK2Q92563 424 aa14.29□□□□□ -0.12
RFC1-203ENST00000418436 RGPD1P0DJD0 1748 aa14.29□□□□□ -0.12
RFC1-203ENST00000418436 BCL9O00512 1426 aa14.28□□□□□ -0.12
RFC1-203ENST00000418436 EIF4A2Q14240 407 aaKnown RBP14.28□□□□□ -0.12
RFC1-203ENST00000418436 MARCH10Q8NA82 808 aaPredicted RBP14.28□□□□□ -0.12
RFC1-203ENST00000418436 SHANK3Q9BYB0 1731 aa14.28□□□□□ -0.12
RFC1-203ENST00000418436 TNS1Q9HBL0 1735 aaKnown RBP14.27□□□□□ -0.12
RFC1-203ENST00000418436 MEGF6O75095 1541 aa14.27□□□□□ -0.12
RFC1-203ENST00000418436 OVOS2A0A0G2JMS6 1433 aa14.27□□□□□ -0.12
RFC1-203ENST00000418436 USHBP1Q8N6Y0 703 aa14.27□□□□□ -0.13
RFC1-203ENST00000418436 EYA1Q99502 592 aa14.27□□□□□ -0.13
RFC1-203ENST00000418436 MTHFSP49914 203 aa14.26□□□□□ -0.13
RFC1-203ENST00000418436 GSE1Q14687 1217 aa14.26□□□□□ -0.13
RFC1-203ENST00000418436 ASTLQ6HA08 431 aaPredicted RBP14.26□□□□□ -0.13
RFC1-203ENST00000418436 PCDHB13Q9Y5F0 798 aa14.25□□□□□ -0.13
RFC1-203ENST00000418436 PKD1L3Q7Z443 1732 aa14.24□□□□□ -0.13
RFC1-203ENST00000418436 IGSF1Q8N6C5 1336 aa14.24□□□□□ -0.13
RFC1-203ENST00000418436 DDX10Q13206 875 aaKnown RBP14.24□□□□□ -0.13
RFC1-203ENST00000418436 IL13P35225 146 aa14.23□□□□□ -0.13
RFC1-203ENST00000418436 CNGB1Q14028 1251 aaPredicted RBP14.23□□□□□ -0.13
RFC1-203ENST00000418436 ZCRB1Q8TBF4 217 aaKnown RBP14.23□□□□□ -0.13
RFC1-203ENST00000418436 RAPGEF4Q8WZA2 1011 aa14.23□□□□□ -0.13
RFC1-203ENST00000418436 ATMINO43313 823 aaPredicted RBP14.22□□□□□ -0.13
RFC1-203ENST00000418436 TRIM37O94972 964 aa14.22□□□□□ -0.13
RFC1-203ENST00000418436 TATP17735 454 aaPredicted RBP14.22□□□□□ -0.13
RFC1-203ENST00000418436 TRPC6Q9Y210 931 aa14.22□□□□□ -0.13
RFC1-203ENST00000418436 COL3A1P02461 1466 aaPredicted RBP14.22□□□□□ -0.13
RFC1-203ENST00000418436 PARD3Q8TEW0 1356 aa14.22□□□□□ -0.13
RFC1-203ENST00000418436 PLEKHG2Q9H7P9 1386 aa14.22□□□□□ -0.13
RFC1-203ENST00000418436 PPP2R1AP30153 589 aa14.21□□□□□ -0.13
RFC1-203ENST00000418436 SF3B2Q13435 895 aaKnown RBP14.21□□□□□ -0.13
RFC1-203ENST00000418436 NHSQ6T4R5 1651 aa14.2□□□□□ -0.14
RFC1-203ENST00000418436 PYGBP11216 843 aa14.2□□□□□ -0.14
RFC1-203ENST00000418436 TIE1P35590 1138 aa14.2□□□□□ -0.14
RFC1-203ENST00000418436 KDRP35968 1356 aa14.2□□□□□ -0.14
RFC1-203ENST00000418436 ZNF316A6NFI3 1004 aaPredicted RBP14.19□□□□□ -0.14
RFC1-203ENST00000418436 DIAPH1O60610 1272 aaKnown RBP14.19□□□□□ -0.14
RFC1-203ENST00000418436 DEFB132Q7Z7B7 95 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms