RNA–Protein interactions for RNA: ENST00000417773.5

LINC00222-204, long intergenic non-protein coding RNA 222, humanhuman

TSL 1 (best)

Gene LINC00222, Length 599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00222-204ENST00000417773 TNS2Q63HR2 1409 aa18.87■□□□□ 0.61
LINC00222-204ENST00000417773 PHF23Q9BUL5 403 aaPredicted RBP18.86■□□□□ 0.61
LINC00222-204ENST00000417773 USP35Q9P2H5 1018 aa18.86■□□□□ 0.61
LINC00222-204ENST00000417773 PRKAR2BP31323 418 aa18.85■□□□□ 0.61
LINC00222-204ENST00000417773 RAPGEF4Q8WZA2 1011 aa18.85■□□□□ 0.61
LINC00222-204ENST00000417773 CCDC9Q9Y3X0 531 aaKnown RBP18.85■□□□□ 0.61
LINC00222-204ENST00000417773 TATP17735 454 aaPredicted RBP18.84■□□□□ 0.61
LINC00222-204ENST00000417773 FAM98CQ17RN3 349 aaKnown RBP18.84■□□□□ 0.61
LINC00222-204ENST00000417773 PHACTR3Q96KR7 559 aa18.83■□□□□ 0.6
LINC00222-204ENST00000417773 PNNQ9H307 717 aaKnown RBP18.83■□□□□ 0.6
LINC00222-204ENST00000417773 RGS12O14924 1447 aa18.83■□□□□ 0.6
LINC00222-204ENST00000417773 RXRBP28702 533 aa18.82■□□□□ 0.6
LINC00222-204ENST00000417773 AMOTQ4VCS5 1084 aa18.82■□□□□ 0.6
LINC00222-204ENST00000417773 RUNDC1Q96C34 613 aa18.82■□□□□ 0.6
LINC00222-204ENST00000417773 ADAMTS7Q9UKP4 1686 aa18.82■□□□□ 0.6
LINC00222-204ENST00000417773 BRWD3Q6RI45 1802 aa18.8■□□□□ 0.6
LINC00222-204ENST00000417773 ZCRB1Q8TBF4 217 aaKnown RBP18.8■□□□□ 0.6
LINC00222-204ENST00000417773 BCL9O00512 1426 aa18.8■□□□□ 0.6
LINC00222-204ENST00000417773 MTHFSDQ2M296 383 aaKnown RBP18.79■□□□□ 0.6
LINC00222-204ENST00000417773 NCBP3Q53F19 620 aaKnown RBP18.79■□□□□ 0.6
LINC00222-204ENST00000417773 PLEKHO1Q53GL0 409 aaPredicted RBP18.79■□□□□ 0.6
LINC00222-204ENST00000417773 SEPT12Q8IYM1 358 aa18.79■□□□□ 0.6
LINC00222-204ENST00000417773 FAM9BQ8IZU0 186 aa18.79■□□□□ 0.6
LINC00222-204ENST00000417773 CYP27B1O15528 508 aa18.78■□□□□ 0.6
LINC00222-204ENST00000417773 DDB1Q16531 1140 aa18.78■□□□□ 0.6
LINC00222-204ENST00000417773 SPG7Q9UQ90 795 aa18.78■□□□□ 0.6
LINC00222-204ENST00000417773 DLG5Q8TDM6 1919 aa18.78■□□□□ 0.6
LINC00222-204ENST00000417773 PCDH11XQ9BZA7 1347 aa18.77■□□□□ 0.6
LINC00222-204ENST00000417773 PCDH11YQ9BZA8 1340 aa18.77■□□□□ 0.6
LINC00222-204ENST00000417773 EXOC5O00471 708 aa18.77■□□□□ 0.6
LINC00222-204ENST00000417773 NKX1-1Q15270 411 aaPredicted RBP18.77■□□□□ 0.6
LINC00222-204ENST00000417773 CCDC146Q8IYE0 955 aa18.77■□□□□ 0.6
LINC00222-204ENST00000417773 GAS2L2Q8NHY3 880 aa18.77■□□□□ 0.6
LINC00222-204ENST00000417773 PHKG2P15735 406 aa18.76■□□□□ 0.59
LINC00222-204ENST00000417773 NFE2L2Q16236 605 aa18.76■□□□□ 0.59
LINC00222-204ENST00000417773 TMPOP42166 694 aaKnown RBP18.75■□□□□ 0.59
LINC00222-204ENST00000417773 MARCH10Q8NA82 808 aaPredicted RBP18.75■□□□□ 0.59
LINC00222-204ENST00000417773 MAPK8IP3Q9UPT6 1336 aa18.74■□□□□ 0.59
LINC00222-204ENST00000417773 AKAP4Q5JQC9 854 aa18.74■□□□□ 0.59
LINC00222-204ENST00000417773 ZNF530Q6P9A1 599 aaPredicted RBP18.74■□□□□ 0.59
LINC00222-204ENST00000417773 TOGARAM1Q9Y4F4 1720 aa18.74■□□□□ 0.59
LINC00222-204ENST00000417773 KDM6AO15550 1401 aaPredicted RBP18.74■□□□□ 0.59
LINC00222-204ENST00000417773 MAP3K5Q99683 1374 aa18.73■□□□□ 0.59
LINC00222-204ENST00000417773 APAF1O14727 1248 aa18.73■□□□□ 0.59
LINC00222-204ENST00000417773 IFNL2Q8IZJ0 200 aa18.73■□□□□ 0.59
LINC00222-204ENST00000417773 SCN11AQ9UI33 1791 aa18.73■□□□□ 0.59
LINC00222-204ENST00000417773 VIRMAQ69YN4 1812 aaKnown RBP18.72■□□□□ 0.59
LINC00222-204ENST00000417773 MRC1P22897 1456 aa18.72■□□□□ 0.59
LINC00222-204ENST00000417773 CEMIPQ8WUJ3 1361 aa18.72■□□□□ 0.59
LINC00222-204ENST00000417773 HTATSF1O43719 755 aaKnown RBP18.72■□□□□ 0.59
LINC00222-204ENST00000417773 NEFMP07197 916 aa18.71■□□□□ 0.59
LINC00222-204ENST00000417773 CCDC27Q2M243 656 aa18.71■□□□□ 0.59
LINC00222-204ENST00000417773 NGEFQ8N5V2 710 aa18.71■□□□□ 0.59
LINC00222-204ENST00000417773 KRT27Q7Z3Y8 459 aa18.7■□□□□ 0.58
LINC00222-204ENST00000417773 TRIM35Q9UPQ4 493 aa18.7■□□□□ 0.58
LINC00222-204ENST00000417773 GNAT3A8MTJ3 354 aa18.69■□□□□ 0.58
LINC00222-204ENST00000417773 HSP90AB1P08238 724 aaKnown RBP18.69■□□□□ 0.58
LINC00222-204ENST00000417773 DCAF5Q96JK2 942 aa18.69■□□□□ 0.58
LINC00222-204ENST00000417773 SBF2Q86WG5 1849 aa18.69■□□□□ 0.58
LINC00222-204ENST00000417773 SIPA1L3O60292 1781 aaPredicted RBP18.68■□□□□ 0.58
LINC00222-204ENST00000417773 SOCS7O14512 581 aa18.68■□□□□ 0.58
LINC00222-204ENST00000417773 PDE3BQ13370 1112 aa18.68■□□□□ 0.58
LINC00222-204ENST00000417773 C1orf141Q5JVX7 400 aa18.68■□□□□ 0.58
LINC00222-204ENST00000417773 IL17REQ8NFR9 667 aa18.68■□□□□ 0.58
LINC00222-204ENST00000417773 DDX54Q8TDD1 881 aaKnown RBP18.68■□□□□ 0.58
LINC00222-204ENST00000417773 DOT1LQ8TEK3 1739 aa18.68■□□□□ 0.58
LINC00222-204ENST00000417773 ZNF521Q96K83 1311 aa18.68■□□□□ 0.58
LINC00222-204ENST00000417773 RNMTO43148 476 aaKnown RBP18.67■□□□□ 0.58
LINC00222-204ENST00000417773 RIPK4P57078 832 aa18.67■□□□□ 0.58
LINC00222-204ENST00000417773 NHSQ6T4R5 1651 aa18.66■□□□□ 0.58
LINC00222-204ENST00000417773 A0A0G2JS52 829 aa18.66■□□□□ 0.58
LINC00222-204ENST00000417773 MYT1Q01538 1121 aa18.66■□□□□ 0.58
LINC00222-204ENST00000417773 RRP7AQ9Y3A4 280 aaKnown RBP18.66■□□□□ 0.58
LINC00222-204ENST00000417773 ITGB4P16144 1822 aa18.65■□□□□ 0.58
LINC00222-204ENST00000417773 LMOD3Q0VAK6 560 aa18.65■□□□□ 0.58
LINC00222-204ENST00000417773 LGR6Q9HBX8 967 aa18.65■□□□□ 0.58
LINC00222-204ENST00000417773 ERVV-2B6SEH9 535 aa18.64■□□□□ 0.57
LINC00222-204ENST00000417773 MPRIPQ6WCQ1 1025 aa18.64■□□□□ 0.57
LINC00222-204ENST00000417773 EP400Q96L91 3159 aa18.63■□□□□ 0.57
LINC00222-204ENST00000417773 WWC1Q8IX03 1113 aa18.63■□□□□ 0.57
LINC00222-204ENST00000417773 PAPPAQ13219 1627 aa18.63■□□□□ 0.57
LINC00222-204ENST00000417773 FAM196AQ6ZSG2 479 aa18.62■□□□□ 0.57
LINC00222-204ENST00000417773 DCTN1Q14203 1278 aa18.61■□□□□ 0.57
LINC00222-204ENST00000417773 FAM182BQ5T319 152 aa18.61■□□□□ 0.57
LINC00222-204ENST00000417773 MCM10Q7L590 875 aa18.61■□□□□ 0.57
LINC00222-204ENST00000417773 RTF1Q92541 710 aaKnown RBP18.61■□□□□ 0.57
LINC00222-204ENST00000417773 NEUROD2Q15784 382 aa18.6■□□□□ 0.57
LINC00222-204ENST00000417773 ILDR2Q71H61 639 aa18.6■□□□□ 0.57
LINC00222-204ENST00000417773 SLC52A2Q9HAB3 445 aa18.6■□□□□ 0.57
LINC00222-204ENST00000417773 IL16Q14005 1332 aa18.59■□□□□ 0.57
LINC00222-204ENST00000417773 THUMPD2Q9BTF0 503 aaKnown RBP18.59■□□□□ 0.57
LINC00222-204ENST00000417773 KDM3BQ7LBC6 1761 aa18.58■□□□□ 0.57
LINC00222-204ENST00000417773 TNS1Q9HBL0 1735 aaKnown RBP18.58■□□□□ 0.57
LINC00222-204ENST00000417773 ZNF853P0CG23 659 aa18.58■□□□□ 0.56
LINC00222-204ENST00000417773 WDR63Q8IWG1 891 aa18.58■□□□□ 0.56
LINC00222-204ENST00000417773 ZBED9Q6R2W3 1325 aa18.57■□□□□ 0.56
LINC00222-204ENST00000417773 PRIM1P49642 420 aaKnown RBP18.57■□□□□ 0.56
LINC00222-204ENST00000417773 BABAM1Q9NWV8 329 aa18.57■□□□□ 0.56
LINC00222-204ENST00000417773 BTAF1O14981 1849 aa18.57■□□□□ 0.56
LINC00222-204ENST00000417773 UBR2Q8IWV8 1755 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms