RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 UTRNP46939 3433 aa11.12□□□□□ -0.63
HLA-DPA1-241ENST00000417724 FAM208AQ9UK61 1670 aaKnown RBP11.12□□□□□ -0.63
HLA-DPA1-241ENST00000417724 MSH5O43196 834 aa11.12□□□□□ -0.63
HLA-DPA1-241ENST00000417724 AMPHP49418 695 aa11.12□□□□□ -0.63
HLA-DPA1-241ENST00000417724 COG3Q96JB2 828 aa11.12□□□□□ -0.63
HLA-DPA1-241ENST00000417724 CCNL1Q9UK58 526 aaPredicted RBP11.12□□□□□ -0.63
HLA-DPA1-241ENST00000417724 NLGN2Q8NFZ4 835 aa11.11□□□□□ -0.63
HLA-DPA1-241ENST00000417724 A0A1W2PP64 1363 aa11.11□□□□□ -0.63
HLA-DPA1-241ENST00000417724 LY75O60449 1722 aa11.1□□□□□ -0.63
HLA-DPA1-241ENST00000417724 SLC24A1O60721 1099 aa11.1□□□□□ -0.63
HLA-DPA1-241ENST00000417724 HOXC9P31274 260 aa11.1□□□□□ -0.63
HLA-DPA1-241ENST00000417724 MAP3K19Q56UN5 1328 aa11.09□□□□□ -0.63
HLA-DPA1-241ENST00000417724 TUBGCP6Q96RT7 1819 aa11.09□□□□□ -0.63
HLA-DPA1-241ENST00000417724 USP47Q96K76 1375 aa11.09□□□□□ -0.63
HLA-DPA1-241ENST00000417724 COL23A1Q86Y22 540 aaPredicted RBP11.09□□□□□ -0.63
HLA-DPA1-241ENST00000417724 CGNL1Q0VF96 1302 aa11.09□□□□□ -0.63
HLA-DPA1-241ENST00000417724 YBX3P16989 372 aaKnown RBP eCLIP11.08□□□□□ -0.64
HLA-DPA1-241ENST00000417724 FLAD1Q8NFF5 587 aa11.08□□□□□ -0.64
HLA-DPA1-241ENST00000417724 DOT1LQ8TEK3 1739 aa11.08□□□□□ -0.64
HLA-DPA1-241ENST00000417724 NSD2O96028 1365 aa11.07□□□□□ -0.64
HLA-DPA1-241ENST00000417724 FBLN1P23142 703 aa11.07□□□□□ -0.64
HLA-DPA1-241ENST00000417724 IFFO2Q5TF58 517 aa11.07□□□□□ -0.64
HLA-DPA1-241ENST00000417724 RAPGEF4Q8WZA2 1011 aa11.07□□□□□ -0.64
HLA-DPA1-241ENST00000417724 CD2APQ9Y5K6 639 aa11.07□□□□□ -0.64
HLA-DPA1-241ENST00000417724 RGPD2P0DJD1 1756 aa11.07□□□□□ -0.64
HLA-DPA1-241ENST00000417724 NBPF6Q5VWK0 638 aa11.06□□□□□ -0.64
HLA-DPA1-241ENST00000417724 MSL1Q68DK7 614 aa11.06□□□□□ -0.64
HLA-DPA1-241ENST00000417724 NBPF4Q96M43 638 aa11.06□□□□□ -0.64
HLA-DPA1-241ENST00000417724 SHANK3Q9BYB0 1731 aa11.06□□□□□ -0.64
HLA-DPA1-241ENST00000417724 TATP17735 454 aaPredicted RBP11.05□□□□□ -0.64
HLA-DPA1-241ENST00000417724 MEGF6O75095 1541 aa11.04□□□□□ -0.64
HLA-DPA1-241ENST00000417724 RTL1A6NKG5 1358 aa11.04□□□□□ -0.64
HLA-DPA1-241ENST00000417724 ST20-MTHFSA0A0A6YYL1 179 aa11.04□□□□□ -0.64
HLA-DPA1-241ENST00000417724 RRS1Q15050 365 aaKnown RBP11.04□□□□□ -0.64
HLA-DPA1-241ENST00000417724 TESK2Q96S53 571 aa11.04□□□□□ -0.64
HLA-DPA1-241ENST00000417724 GPBP1L1Q9HC44 474 aaPredicted RBP11.04□□□□□ -0.64
HLA-DPA1-241ENST00000417724 TONSLQ96HA7 1378 aa11.03□□□□□ -0.64
HLA-DPA1-241ENST00000417724 SMG6Q86US8 1419 aaKnown RBP11.03□□□□□ -0.64
HLA-DPA1-241ENST00000417724 ATP10DQ9P241 1426 aa11.03□□□□□ -0.64
HLA-DPA1-241ENST00000417724 FYB1O15117 783 aa11.03□□□□□ -0.64
HLA-DPA1-241ENST00000417724 MPRIPQ6WCQ1 1025 aa11.03□□□□□ -0.64
HLA-DPA1-241ENST00000417724 USHBP1Q8N6Y0 703 aa11.03□□□□□ -0.64
HLA-DPA1-241ENST00000417724 SMARCC1Q92922 1105 aaPredicted RBP11.03□□□□□ -0.64
HLA-DPA1-241ENST00000417724 PCDH11XQ9BZA7 1347 aa11.03□□□□□ -0.64
HLA-DPA1-241ENST00000417724 PCDH11YQ9BZA8 1340 aa11.03□□□□□ -0.64
HLA-DPA1-241ENST00000417724 C5P01031 1676 aa11.02□□□□□ -0.64
HLA-DPA1-241ENST00000417724 GGNBP2Q9H3C7 697 aa11.02□□□□□ -0.65
HLA-DPA1-241ENST00000417724 TAF1LQ8IZX4 1826 aa11.02□□□□□ -0.65
HLA-DPA1-241ENST00000417724 PALLDQ8WX93 1383 aa11.02□□□□□ -0.65
HLA-DPA1-241ENST00000417724 HSP90AB2PQ58FF8 381 aa11.01□□□□□ -0.65
HLA-DPA1-241ENST00000417724 AK7Q96M32 723 aa11.01□□□□□ -0.65
HLA-DPA1-241ENST00000417724 INSRP06213 1382 aa11.01□□□□□ -0.65
HLA-DPA1-241ENST00000417724 CYP27B1O15528 508 aa11□□□□□ -0.65
HLA-DPA1-241ENST00000417724 GOLGB1Q14789 3259 aaKnown RBP11□□□□□ -0.65
HLA-DPA1-241ENST00000417724 HSPA6P17066 643 aa10.99□□□□□ -0.65
HLA-DPA1-241ENST00000417724 TMF1P82094 1093 aa10.99□□□□□ -0.65
HLA-DPA1-241ENST00000417724 ZNF526Q8TF50 670 aaPredicted RBP10.99□□□□□ -0.65
HLA-DPA1-241ENST00000417724 FLT4P35916 1363 aa10.99□□□□□ -0.65
HLA-DPA1-241ENST00000417724 KIF24Q5T7B8 1368 aa10.99□□□□□ -0.65
HLA-DPA1-241ENST00000417724 NSD3Q9BZ95 1437 aa10.99□□□□□ -0.65
HLA-DPA1-241ENST00000417724 ITGB4P16144 1822 aa10.98□□□□□ -0.65
HLA-DPA1-241ENST00000417724 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.98□□□□□ -0.65
HLA-DPA1-241ENST00000417724 PHF14O94880 888 aa10.98□□□□□ -0.65
HLA-DPA1-241ENST00000417724 SSFA2P28290 1259 aa10.98□□□□□ -0.65
HLA-DPA1-241ENST00000417724 PIGBQ92521 554 aa10.98□□□□□ -0.65
HLA-DPA1-241ENST00000417724 IGSF1Q8N6C5 1336 aa10.98□□□□□ -0.65
HLA-DPA1-241ENST00000417724 C4BP0C0L5 1744 aa10.98□□□□□ -0.65
HLA-DPA1-241ENST00000417724 NKX1-1Q15270 411 aaPredicted RBP10.97□□□□□ -0.65
HLA-DPA1-241ENST00000417724 CDCA8Q53HL2 280 aa10.97□□□□□ -0.65
HLA-DPA1-241ENST00000417724 SPG7Q9UQ90 795 aa10.97□□□□□ -0.65
HLA-DPA1-241ENST00000417724 ADCY9O60503 1353 aa10.97□□□□□ -0.65
HLA-DPA1-241ENST00000417724 CEP350Q5VT06 3117 aa10.96□□□□□ -0.65
HLA-DPA1-241ENST00000417724 UBR3Q6ZT12 1888 aa10.96□□□□□ -0.65
HLA-DPA1-241ENST00000417724 LOC102724428A0A0B4J2F2 783 aa10.96□□□□□ -0.65
HLA-DPA1-241ENST00000417724 SIK1P57059 783 aa10.96□□□□□ -0.65
HLA-DPA1-241ENST00000417724 WWC3Q9ULE0 1092 aa10.96□□□□□ -0.65
HLA-DPA1-241ENST00000417724 PPM1GO15355 546 aaPredicted RBP10.95□□□□□ -0.66
HLA-DPA1-241ENST00000417724 SMIM5Q71RC9 77 aa10.95□□□□□ -0.66
HLA-DPA1-241ENST00000417724 AMIGO3Q86WK7 504 aa10.95□□□□□ -0.66
HLA-DPA1-241ENST00000417724 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.95□□□□□ -0.66
HLA-DPA1-241ENST00000417724 TMOD3Q9NYL9 352 aa10.95□□□□□ -0.66
HLA-DPA1-241ENST00000417724 KIF20BQ96Q89 1820 aa10.94□□□□□ -0.66
HLA-DPA1-241ENST00000417724 GNPATO15228 680 aa10.94□□□□□ -0.66
HLA-DPA1-241ENST00000417724 ATP6V1AP38606 617 aa10.94□□□□□ -0.66
HLA-DPA1-241ENST00000417724 LINC00116Q8NCU8 138 aa10.94□□□□□ -0.66
HLA-DPA1-241ENST00000417724 EMILIN1Q9Y6C2 1016 aa10.94□□□□□ -0.66
HLA-DPA1-241ENST00000417724 PKD1L3Q7Z443 1732 aa10.93□□□□□ -0.66
HLA-DPA1-241ENST00000417724 TOGARAM1Q9Y4F4 1720 aa10.93□□□□□ -0.66
HLA-DPA1-241ENST00000417724 ASAP1Q9ULH1 1129 aa10.93□□□□□ -0.66
HLA-DPA1-241ENST00000417724 MAP2P11137 1827 aaKnown RBP10.93□□□□□ -0.66
HLA-DPA1-241ENST00000417724 WASHC2AQ641Q2 1341 aa10.92□□□□□ -0.66
HLA-DPA1-241ENST00000417724 KIF3CO14782 793 aa10.92□□□□□ -0.66
HLA-DPA1-241ENST00000417724 MMP10P09238 476 aa10.92□□□□□ -0.66
HLA-DPA1-241ENST00000417724 TGFB2P61812 414 aa10.92□□□□□ -0.66
HLA-DPA1-241ENST00000417724 TRAPPC3LQ5T215 181 aa10.92□□□□□ -0.66
HLA-DPA1-241ENST00000417724 IFNL2Q8IZJ0 200 aa10.92□□□□□ -0.66
HLA-DPA1-241ENST00000417724 NLGN1Q8N2Q7 840 aa10.92□□□□□ -0.66
HLA-DPA1-241ENST00000417724 CARD14Q9BXL6 1004 aa10.92□□□□□ -0.66
HLA-DPA1-241ENST00000417724 APLP1P51693 650 aa10.91□□□□□ -0.66
HLA-DPA1-241ENST00000417724 ITPK1Q13572 414 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms