RNA–Protein interactions for RNA: ENST00000417437.6

VNN3-205, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-205ENST00000417437 WDR17Q8IZU2 1322 aa9□□□□□ -0.97
VNN3-205ENST00000417437 AATKQ6ZMQ8 1374 aa8.99□□□□□ -0.97
VNN3-205ENST00000417437 RGPD5Q99666 1765 aa8.99□□□□□ -0.97
VNN3-205ENST00000417437 WNK3Q9BYP7 1800 aa8.99□□□□□ -0.97
VNN3-205ENST00000417437 ACSBG1Q96GR2 724 aa8.99□□□□□ -0.97
VNN3-205ENST00000417437 CABP2Q9NPB3 220 aa8.99□□□□□ -0.97
VNN3-205ENST00000417437 KCNH5Q8NCM2 988 aa8.98□□□□□ -0.97
VNN3-205ENST00000417437 CARD10Q9BWT7 1032 aa8.97□□□□□ -0.97
VNN3-205ENST00000417437 CABP1Q9NZU7 370 aa8.97□□□□□ -0.97
VNN3-205ENST00000417437 NOP58Q9Y2X3 529 aaKnown RBP8.97□□□□□ -0.97
VNN3-205ENST00000417437 ANP32AP39687 249 aaKnown RBP8.96□□□□□ -0.98
VNN3-205ENST00000417437 BCL11AQ9H165 835 aa8.96□□□□□ -0.98
VNN3-205ENST00000417437 AXIN2Q9Y2T1 843 aa8.96□□□□□ -0.98
VNN3-205ENST00000417437 CENPJQ9HC77 1338 aaPredicted RBP8.96□□□□□ -0.98
VNN3-205ENST00000417437 TRPM1Q7Z4N2 1603 aa8.95□□□□□ -0.98
VNN3-205ENST00000417437 GRIN3BO60391 1043 aa8.95□□□□□ -0.98
VNN3-205ENST00000417437 ABCB7O75027 752 aa8.95□□□□□ -0.98
VNN3-205ENST00000417437 SLC16A10Q8TF71 515 aa8.95□□□□□ -0.98
VNN3-205ENST00000417437 SGIP1Q9BQI5 828 aa8.95□□□□□ -0.98
VNN3-205ENST00000417437 NLRP2Q9NX02 1062 aa8.95□□□□□ -0.98
VNN3-205ENST00000417437 TFCP2L1Q9NZI6 479 aa8.95□□□□□ -0.98
VNN3-205ENST00000417437 BCL9O00512 1426 aa8.95□□□□□ -0.98
VNN3-205ENST00000417437 USP6P35125 1406 aa8.95□□□□□ -0.98
VNN3-205ENST00000417437 QRICH2Q9H0J4 1663 aa8.94□□□□□ -0.98
VNN3-205ENST00000417437 BTAF1O14981 1849 aa8.94□□□□□ -0.98
VNN3-205ENST00000417437 RRP1P56182 461 aaKnown RBP8.94□□□□□ -0.98
VNN3-205ENST00000417437 RCAN3Q9UKA8 241 aa8.94□□□□□ -0.98
VNN3-205ENST00000417437 INSRP06213 1382 aa8.94□□□□□ -0.98
VNN3-205ENST00000417437 MAP3K5Q99683 1374 aa8.94□□□□□ -0.98
VNN3-205ENST00000417437 CPSF1Q10570 1443 aaKnown RBP8.94□□□□□ -0.98
VNN3-205ENST00000417437 SLIT3O75094 1523 aa8.94□□□□□ -0.98
VNN3-205ENST00000417437 NHSQ6T4R5 1651 aa8.94□□□□□ -0.98
VNN3-205ENST00000417437 COL18A1P39060 1754 aa8.94□□□□□ -0.98
VNN3-205ENST00000417437 TCERG1O14776 1098 aaKnown RBP8.93□□□□□ -0.98
VNN3-205ENST00000417437 IL2RBP14784 551 aa8.93□□□□□ -0.98
VNN3-205ENST00000417437 ARHGEF25Q86VW2 580 aa8.93□□□□□ -0.98
VNN3-205ENST00000417437 SYTL4Q96C24 671 aaPredicted RBP8.93□□□□□ -0.98
VNN3-205ENST00000417437 IPO9Q96P70 1041 aaKnown RBP8.93□□□□□ -0.98
VNN3-205ENST00000417437 ZNF692Q9BU19 519 aaPredicted RBP8.93□□□□□ -0.98
VNN3-205ENST00000417437 GPBP1L1Q9HC44 474 aaPredicted RBP8.93□□□□□ -0.98
VNN3-205ENST00000417437 EVC2Q86UK5 1308 aa8.93□□□□□ -0.98
VNN3-205ENST00000417437 KIAA1210Q9ULL0 1709 aa8.93□□□□□ -0.98
VNN3-205ENST00000417437 PIK3C2AO00443 1686 aa8.92□□□□□ -0.98
VNN3-205ENST00000417437 TNS2Q63HR2 1409 aa8.92□□□□□ -0.98
VNN3-205ENST00000417437 ZNF827Q17R98 1081 aa8.92□□□□□ -0.98
VNN3-205ENST00000417437 NBPF1Q3BBV0 1214 aa8.92□□□□□ -0.98
VNN3-205ENST00000417437 ZNF526Q8TF50 670 aaPredicted RBP8.92□□□□□ -0.98
VNN3-205ENST00000417437 ZBTB47Q9UFB7 747 aaPredicted RBP8.92□□□□□ -0.98
VNN3-205ENST00000417437 TTC21BQ7Z4L5 1316 aa8.91□□□□□ -0.98
VNN3-205ENST00000417437 PER1O15534 1290 aaPredicted RBP8.91□□□□□ -0.98
VNN3-205ENST00000417437 TMF1P82094 1093 aa8.91□□□□□ -0.98
VNN3-205ENST00000417437 SLC27A3Q5K4L6 730 aa8.91□□□□□ -0.98
VNN3-205ENST00000417437 NLGN2Q8NFZ4 835 aa8.91□□□□□ -0.98
VNN3-205ENST00000417437 DDX54Q8TDD1 881 aaKnown RBP8.91□□□□□ -0.98
VNN3-205ENST00000417437 TTC21AQ8NDW8 1320 aa8.9□□□□□ -0.98
VNN3-205ENST00000417437 MS4A1P11836 297 aa8.9□□□□□ -0.98
VNN3-205ENST00000417437 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.9□□□□□ -0.98
VNN3-205ENST00000417437 EXOC6Q8TAG9 804 aa8.9□□□□□ -0.98
VNN3-205ENST00000417437 SHANK3Q9BYB0 1731 aa8.89□□□□□ -0.99
VNN3-205ENST00000417437 HSPA6P17066 643 aa8.89□□□□□ -0.99
VNN3-205ENST00000417437 PANK3Q9H999 370 aa8.89□□□□□ -0.99
VNN3-205ENST00000417437 LRRC4BQ9NT99 713 aa8.89□□□□□ -0.99
VNN3-205ENST00000417437 ABCC6O95255 1503 aa8.89□□□□□ -0.99
VNN3-205ENST00000417437 QSER1Q2KHR3 1735 aa8.88□□□□□ -0.99
VNN3-205ENST00000417437 PAPPAQ13219 1627 aa8.88□□□□□ -0.99
VNN3-205ENST00000417437 PNPLA7Q6ZV29 1317 aa8.88□□□□□ -0.99
VNN3-205ENST00000417437 DEKP35659 375 aaKnown RBP8.88□□□□□ -0.99
VNN3-205ENST00000417437 KCNQ4P56696 695 aa8.88□□□□□ -0.99
VNN3-205ENST00000417437 CDCA8Q53HL2 280 aa8.88□□□□□ -0.99
VNN3-205ENST00000417437 ANKRD24Q8TF21 1146 aa8.88□□□□□ -0.99
VNN3-205ENST00000417437 AKT1S1Q96B36 256 aa8.88□□□□□ -0.99
VNN3-205ENST00000417437 LTN1O94822 1766 aa8.88□□□□□ -0.99
VNN3-205ENST00000417437 ATP10DQ9P241 1426 aa8.88□□□□□ -0.99
VNN3-205ENST00000417437 YBX3P16989 372 aaKnown RBP eCLIP8.87□□□□□ -0.99
VNN3-205ENST00000417437 RTL5Q5HYW3 569 aaPredicted RBP8.87□□□□□ -0.99
VNN3-205ENST00000417437 CC2D1BQ5T0F9 858 aaKnown RBP8.87□□□□□ -0.99
VNN3-205ENST00000417437 MSL1Q68DK7 614 aa8.87□□□□□ -0.99
VNN3-205ENST00000417437 LTV1Q96GA3 475 aaPredicted RBP8.87□□□□□ -0.99
VNN3-205ENST00000417437 TESK2Q96S53 571 aa8.87□□□□□ -0.99
VNN3-205ENST00000417437 SALL2Q9Y467 1007 aaPredicted RBP8.87□□□□□ -0.99
VNN3-205ENST00000417437 ERBB3P21860 1342 aa8.86□□□□□ -0.99
VNN3-205ENST00000417437 HMGB2P26583 209 aaKnown RBP8.86□□□□□ -0.99
VNN3-205ENST00000417437 PRIM1P49642 420 aaKnown RBP8.86□□□□□ -0.99
VNN3-205ENST00000417437 CCNL1Q9UK58 526 aaPredicted RBP8.86□□□□□ -0.99
VNN3-205ENST00000417437 UTRNP46939 3433 aa8.86□□□□□ -0.99
VNN3-205ENST00000417437 TUBGCP6Q96RT7 1819 aa8.86□□□□□ -0.99
VNN3-205ENST00000417437 PDE4AP27815 886 aa8.85□□□□□ -0.99
VNN3-205ENST00000417437 KNSTRNQ9Y448 316 aa8.85□□□□□ -0.99
VNN3-205ENST00000417437 SLC24A1O60721 1099 aa8.84□□□□□ -0.99
VNN3-205ENST00000417437 HDGFL2Q7Z4V5 671 aaPredicted RBP8.84□□□□□ -0.99
VNN3-205ENST00000417437 CDCA7LQ96GN5 454 aa8.84□□□□□ -0.99
VNN3-205ENST00000417437 WWC3Q9ULE0 1092 aa8.84□□□□□ -0.99
VNN3-205ENST00000417437 NFAT5O94916 1531 aa8.84□□□□□ -0.99
VNN3-205ENST00000417437 COL24A1Q17RW2 1714 aa8.83□□□□□ -1
VNN3-205ENST00000417437 NBR1Q14596 966 aa8.83□□□□□ -1
VNN3-205ENST00000417437 WDR43Q15061 677 aaKnown RBP eCLIP8.83□□□□□ -1
VNN3-205ENST00000417437 NME9Q86XW9 330 aa8.83□□□□□ -1
VNN3-205ENST00000417437 COL23A1Q86Y22 540 aaPredicted RBP8.83□□□□□ -1
VNN3-205ENST00000417437 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.83□□□□□ -1
VNN3-205ENST00000417437 FLAD1Q8NFF5 587 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms