RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 LHX6Q9UPM6 363 aa7.79□□□□□ -1.16
CCNT1-202ENST00000417344 DISP3Q9P2K9 1392 aa7.78□□□□□ -1.16
CCNT1-202ENST00000417344 RARSP54136 660 aaKnown RBP7.78□□□□□ -1.16
CCNT1-202ENST00000417344 C17orf53Q8N3J3 647 aaPredicted RBP7.78□□□□□ -1.16
CCNT1-202ENST00000417344 YY1AP1Q9H869 796 aa7.78□□□□□ -1.16
CCNT1-202ENST00000417344 DDX41Q9UJV9 622 aaKnown RBP7.78□□□□□ -1.16
CCNT1-202ENST00000417344 MMP14P50281 582 aa7.78□□□□□ -1.16
CCNT1-202ENST00000417344 TSPY26PQ9H489 355 aa7.78□□□□□ -1.16
CCNT1-202ENST00000417344 TTC12Q9H892 705 aaPredicted RBP7.78□□□□□ -1.16
CCNT1-202ENST00000417344 TNNQ9UQP3 1299 aa7.78□□□□□ -1.16
CCNT1-202ENST00000417344 MORC2Q9Y6X9 1032 aaPredicted RBP7.78□□□□□ -1.16
CCNT1-202ENST00000417344 SAMD9Q5K651 1589 aa7.77□□□□□ -1.17
CCNT1-202ENST00000417344 DNMT1P26358 1616 aaKnown RBP7.77□□□□□ -1.17
CCNT1-202ENST00000417344 SHROOM2Q13796 1616 aa7.77□□□□□ -1.17
CCNT1-202ENST00000417344 NCBP1Q09161 790 aaKnown RBP7.77□□□□□ -1.17
CCNT1-202ENST00000417344 HDAC1Q13547 482 aaPredicted RBP7.77□□□□□ -1.17
CCNT1-202ENST00000417344 MVPQ14764 893 aaKnown RBP7.77□□□□□ -1.17
CCNT1-202ENST00000417344 SYCP1Q15431 976 aa7.77□□□□□ -1.17
CCNT1-202ENST00000417344 PIK3C2GO75747 1445 aa7.77□□□□□ -1.17
CCNT1-202ENST00000417344 MBD3O95983 291 aa7.76□□□□□ -1.17
CCNT1-202ENST00000417344 PTGDRQ13258 359 aa7.76□□□□□ -1.17
CCNT1-202ENST00000417344 CDCA8Q53HL2 280 aa7.76□□□□□ -1.17
CCNT1-202ENST00000417344 TESK2Q96S53 571 aa7.76□□□□□ -1.17
CCNT1-202ENST00000417344 EFCC1Q9HA90 598 aa7.76□□□□□ -1.17
CCNT1-202ENST00000417344 GEMIN8Q9NWZ8 242 aaKnown RBP7.76□□□□□ -1.17
CCNT1-202ENST00000417344 GNPATO15228 680 aa7.76□□□□□ -1.17
CCNT1-202ENST00000417344 FAM193AP78312 1265 aa7.76□□□□□ -1.17
CCNT1-202ENST00000417344 DHX37Q8IY37 1157 aaKnown RBP7.76□□□□□ -1.17
CCNT1-202ENST00000417344 MPNDQ8N594 471 aa7.76□□□□□ -1.17
CCNT1-202ENST00000417344 KNSTRNQ9Y448 316 aa7.76□□□□□ -1.17
CCNT1-202ENST00000417344 ERBINQ96RT1 1412 aa7.75□□□□□ -1.17
CCNT1-202ENST00000417344 ERICH4A6NGS2 130 aa7.75□□□□□ -1.17
CCNT1-202ENST00000417344 TMF1P82094 1093 aa7.75□□□□□ -1.17
CCNT1-202ENST00000417344 PKP1Q13835 747 aa7.75□□□□□ -1.17
CCNT1-202ENST00000417344 UVSSAQ2YD98 709 aa7.75□□□□□ -1.17
CCNT1-202ENST00000417344 KRT222Q8N1A0 295 aa7.75□□□□□ -1.17
CCNT1-202ENST00000417344 CWC22Q9HCG8 908 aaKnown RBP7.75□□□□□ -1.17
CCNT1-202ENST00000417344 FEZ2Q9UHY8 353 aaPredicted RBP7.75□□□□□ -1.17
CCNT1-202ENST00000417344 NSFL1CQ9UNZ2 370 aaKnown RBP7.75□□□□□ -1.17
CCNT1-202ENST00000417344 C6orf132Q5T0Z8 1188 aa7.74□□□□□ -1.17
CCNT1-202ENST00000417344 CREBRFQ8IUR6 639 aa7.74□□□□□ -1.17
CCNT1-202ENST00000417344 WWC1Q8IX03 1113 aa7.74□□□□□ -1.17
CCNT1-202ENST00000417344 FAM184AQ8NB25 1140 aa7.74□□□□□ -1.17
CCNT1-202ENST00000417344 KIF18AQ8NI77 898 aa7.74□□□□□ -1.17
CCNT1-202ENST00000417344 KIAA1524Q8TCG1 905 aa7.74□□□□□ -1.17
CCNT1-202ENST00000417344 HDAC5Q9UQL6 1122 aa7.74□□□□□ -1.17
CCNT1-202ENST00000417344 BICRAQ9NZM4 1560 aa7.74□□□□□ -1.17
CCNT1-202ENST00000417344 GPRASP1Q5JY77 1395 aa7.74□□□□□ -1.17
CCNT1-202ENST00000417344 GRIN2AQ12879 1464 aa7.74□□□□□ -1.17
CCNT1-202ENST00000417344 ST18O60284 1047 aa7.74□□□□□ -1.17
CCNT1-202ENST00000417344 BMP2KLQ5H9B9 411 aa7.74□□□□□ -1.17
CCNT1-202ENST00000417344 ZBTB9Q96C00 473 aa7.74□□□□□ -1.17
CCNT1-202ENST00000417344 RBM33Q96EV2 1170 aaKnown RBP7.74□□□□□ -1.17
CCNT1-202ENST00000417344 BCL2L13Q9BXK5 485 aa7.74□□□□□ -1.17
CCNT1-202ENST00000417344 PRAG1Q86YV5 1406 aa7.73□□□□□ -1.17
CCNT1-202ENST00000417344 CEP170Q5SW79 1584 aa7.73□□□□□ -1.17
CCNT1-202ENST00000417344 CLGNO14967 610 aa7.73□□□□□ -1.17
CCNT1-202ENST00000417344 ADCY5O95622 1261 aa7.73□□□□□ -1.17
CCNT1-202ENST00000417344 TNNT3P45378 269 aaPredicted RBP7.73□□□□□ -1.17
CCNT1-202ENST00000417344 SYAP1Q96A49 352 aaPredicted RBP7.73□□□□□ -1.17
CCNT1-202ENST00000417344 ADAM33Q9BZ11 813 aa7.73□□□□□ -1.17
CCNT1-202ENST00000417344 USP25Q9UHP3 1055 aa7.73□□□□□ -1.17
CCNT1-202ENST00000417344 MINK1Q8N4C8 1332 aaPredicted RBP7.73□□□□□ -1.17
CCNT1-202ENST00000417344 MAGI2Q86UL8 1455 aa7.73□□□□□ -1.17
CCNT1-202ENST00000417344 MAP2K5Q13163 448 aa7.73□□□□□ -1.17
CCNT1-202ENST00000417344 RABEP1Q15276 862 aa7.73□□□□□ -1.17
CCNT1-202ENST00000417344 CHMP4CQ96CF2 233 aa7.73□□□□□ -1.17
CCNT1-202ENST00000417344 SLC52A1Q9NWF4 448 aa7.73□□□□□ -1.17
CCNT1-202ENST00000417344 POLA1P09884 1462 aaPredicted RBP7.72□□□□□ -1.17
CCNT1-202ENST00000417344 TRPM1Q7Z4N2 1603 aa7.72□□□□□ -1.17
CCNT1-202ENST00000417344 PRDM2Q13029 1718 aa7.72□□□□□ -1.17
CCNT1-202ENST00000417344 NUCB1Q02818 461 aa7.72□□□□□ -1.17
CCNT1-202ENST00000417344 RAD51AP2Q09MP3 1159 aa7.72□□□□□ -1.17
CCNT1-202ENST00000417344 ZKSCAN2Q63HK3 967 aa7.72□□□□□ -1.17
CCNT1-202ENST00000417344 DZIP1LQ8IYY4 767 aaKnown RBP7.72□□□□□ -1.17
CCNT1-202ENST00000417344 TRERF1Q96PN7 1200 aa7.72□□□□□ -1.17
CCNT1-202ENST00000417344 ZDHHC9Q9Y397 364 aa7.72□□□□□ -1.17
CCNT1-202ENST00000417344 ZNF644Q9H582 1327 aaPredicted RBP7.72□□□□□ -1.17
CCNT1-202ENST00000417344 APPP05067 770 aa7.71□□□□□ -1.17
CCNT1-202ENST00000417344 TPM3P06753 285 aa7.71□□□□□ -1.17
CCNT1-202ENST00000417344 PTPREP23469 700 aa7.71□□□□□ -1.17
CCNT1-202ENST00000417344 EMP3P54852 163 aa7.71□□□□□ -1.17
CCNT1-202ENST00000417344 HNRNPH2P55795 449 aaKnown RBP7.71□□□□□ -1.17
CCNT1-202ENST00000417344 TSR1Q2NL82 804 aaKnown RBP7.71□□□□□ -1.17
CCNT1-202ENST00000417344 AXDND1Q5T1B0 1012 aaPredicted RBP7.71□□□□□ -1.17
CCNT1-202ENST00000417344 TBC1D9Q6ZT07 1266 aa7.71□□□□□ -1.17
CCNT1-202ENST00000417344 KRI1Q8N9T8 703 aaKnown RBP7.71□□□□□ -1.17
CCNT1-202ENST00000417344 AK7Q96M32 723 aa7.71□□□□□ -1.17
CCNT1-202ENST00000417344 CDHR5Q9HBB8 845 aa7.71□□□□□ -1.17
CCNT1-202ENST00000417344 NPDC1Q9NQX5 325 aaPredicted RBP7.71□□□□□ -1.17
CCNT1-202ENST00000417344 PYCARDQ9ULZ3 195 aa7.71□□□□□ -1.17
CCNT1-202ENST00000417344 ANKRD36BQ8N2N9 1353 aa7.71□□□□□ -1.17
CCNT1-202ENST00000417344 SMTNL1A8MU46 457 aa7.71□□□□□ -1.18
CCNT1-202ENST00000417344 PPP1R3GB7ZBB8 358 aa7.71□□□□□ -1.18
CCNT1-202ENST00000417344 ERBB3P21860 1342 aa7.71□□□□□ -1.18
CCNT1-202ENST00000417344 NESP48681 1621 aa7.71□□□□□ -1.18
CCNT1-202ENST00000417344 PRDM15P57071 1507 aaPredicted RBP7.71□□□□□ -1.18
CCNT1-202ENST00000417344 CUL7Q14999 1698 aa7.71□□□□□ -1.18
CCNT1-202ENST00000417344 KDM5DQ9BY66 1539 aa7.71□□□□□ -1.18
CCNT1-202ENST00000417344 FAM53CQ9NYF3 392 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms