RNA–Protein interactions for RNA: ENST00000417094.5

TSFM-202, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 4

Gene TSFM, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-202ENST00000417094 C5P01031 1676 aa13.36□□□□□ -0.27
TSFM-202ENST00000417094 KAT6BQ8WYB5 2073 aa13.36□□□□□ -0.27
TSFM-202ENST00000417094 CGNL1Q0VF96 1302 aa13.36□□□□□ -0.27
TSFM-202ENST00000417094 COG3Q96JB2 828 aa13.35□□□□□ -0.27
TSFM-202ENST00000417094 KIF20BQ96Q89 1820 aa13.34□□□□□ -0.27
TSFM-202ENST00000417094 KIF24Q5T7B8 1368 aa13.34□□□□□ -0.27
TSFM-202ENST00000417094 DDX54Q8TDD1 881 aaKnown RBP13.34□□□□□ -0.27
TSFM-202ENST00000417094 TAF1LQ8IZX4 1826 aa13.34□□□□□ -0.27
TSFM-202ENST00000417094 PKD1L3Q7Z443 1732 aa13.33□□□□□ -0.27
TSFM-202ENST00000417094 ANKRD26Q9UPS8 1709 aa13.33□□□□□ -0.27
TSFM-202ENST00000417094 NCAPD2Q15021 1401 aa13.33□□□□□ -0.28
TSFM-202ENST00000417094 POLD1P28340 1107 aa13.33□□□□□ -0.28
TSFM-202ENST00000417094 PRIM1P49642 420 aaKnown RBP13.33□□□□□ -0.28
TSFM-202ENST00000417094 ZCRB1Q8TBF4 217 aaKnown RBP13.33□□□□□ -0.28
TSFM-202ENST00000417094 C1QTNF8P60827 252 aa13.32□□□□□ -0.28
TSFM-202ENST00000417094 TOGARAM1Q9Y4F4 1720 aa13.32□□□□□ -0.28
TSFM-202ENST00000417094 INSRP06213 1382 aa13.32□□□□□ -0.28
TSFM-202ENST00000417094 SMG6Q86US8 1419 aaKnown RBP13.31□□□□□ -0.28
TSFM-202ENST00000417094 ST20-MTHFSA0A0A6YYL1 179 aa13.31□□□□□ -0.28
TSFM-202ENST00000417094 TFCP2L1Q9NZI6 479 aa13.31□□□□□ -0.28
TSFM-202ENST00000417094 AMPHP49418 695 aa13.3□□□□□ -0.28
TSFM-202ENST00000417094 LTV1Q96GA3 475 aaPredicted RBP13.3□□□□□ -0.28
TSFM-202ENST00000417094 CCNL1Q9UK58 526 aaPredicted RBP13.3□□□□□ -0.28
TSFM-202ENST00000417094 USP47Q96K76 1375 aa13.3□□□□□ -0.28
TSFM-202ENST00000417094 FYB1O15117 783 aa13.29□□□□□ -0.28
TSFM-202ENST00000417094 HMGB2P26583 209 aaKnown RBP13.29□□□□□ -0.28
TSFM-202ENST00000417094 GPR162Q16538 588 aa13.29□□□□□ -0.28
TSFM-202ENST00000417094 NBPF6Q5VWK0 638 aa13.29□□□□□ -0.28
TSFM-202ENST00000417094 NBPF4Q96M43 638 aa13.29□□□□□ -0.28
TSFM-202ENST00000417094 ITGB4P16144 1822 aa13.29□□□□□ -0.28
TSFM-202ENST00000417094 FLT4P35916 1363 aa13.29□□□□□ -0.28
TSFM-202ENST00000417094 CEP350Q5VT06 3117 aa13.28□□□□□ -0.28
TSFM-202ENST00000417094 C4BP0C0L5 1744 aa13.28□□□□□ -0.28
TSFM-202ENST00000417094 KCNQ4P56696 695 aa13.28□□□□□ -0.28
TSFM-202ENST00000417094 NLGN2Q8NFZ4 835 aa13.28□□□□□ -0.28
TSFM-202ENST00000417094 SYTL4Q96C24 671 aaPredicted RBP13.28□□□□□ -0.28
TSFM-202ENST00000417094 PCDH11XQ9BZA7 1347 aa13.28□□□□□ -0.28
TSFM-202ENST00000417094 PCDH11YQ9BZA8 1340 aa13.28□□□□□ -0.28
TSFM-202ENST00000417094 MAP2P11137 1827 aaKnown RBP13.27□□□□□ -0.28
TSFM-202ENST00000417094 UBR3Q6ZT12 1888 aa13.27□□□□□ -0.28
TSFM-202ENST00000417094 FBLN1P23142 703 aa13.27□□□□□ -0.29
TSFM-202ENST00000417094 RRS1Q15050 365 aaKnown RBP13.26□□□□□ -0.29
TSFM-202ENST00000417094 COL23A1Q86Y22 540 aaPredicted RBP13.26□□□□□ -0.29
TSFM-202ENST00000417094 RAPGEF4Q8WZA2 1011 aa13.26□□□□□ -0.29
TSFM-202ENST00000417094 PALLDQ8WX93 1383 aa13.25□□□□□ -0.29
TSFM-202ENST00000417094 PLEKHG2Q9H7P9 1386 aa13.25□□□□□ -0.29
TSFM-202ENST00000417094 SENP3-EIF4A1A0A087X0R7 540 aa13.25□□□□□ -0.29
TSFM-202ENST00000417094 GRIN3BO60391 1043 aa13.25□□□□□ -0.29
TSFM-202ENST00000417094 GIGYF1O75420 1035 aaPredicted RBP13.25□□□□□ -0.29
TSFM-202ENST00000417094 YBX3P16989 372 aaKnown RBP eCLIP13.25□□□□□ -0.29
TSFM-202ENST00000417094 FLAD1Q8NFF5 587 aa13.25□□□□□ -0.29
TSFM-202ENST00000417094 NSD3Q9BZ95 1437 aa13.24□□□□□ -0.29
TSFM-202ENST00000417094 ADCY9O60503 1353 aa13.24□□□□□ -0.29
TSFM-202ENST00000417094 TATP17735 454 aaPredicted RBP13.24□□□□□ -0.29
TSFM-202ENST00000417094 TMF1P82094 1093 aa13.24□□□□□ -0.29
TSFM-202ENST00000417094 GGNBP2Q9H3C7 697 aa13.24□□□□□ -0.29
TSFM-202ENST00000417094 CD2APQ9Y5K6 639 aa13.24□□□□□ -0.29
TSFM-202ENST00000417094 CYP27B1O15528 508 aa13.23□□□□□ -0.29
TSFM-202ENST00000417094 NKX1-1Q15270 411 aaPredicted RBP13.23□□□□□ -0.29
TSFM-202ENST00000417094 USHBP1Q8N6Y0 703 aa13.23□□□□□ -0.29
TSFM-202ENST00000417094 ZNF831Q5JPB2 1677 aa13.23□□□□□ -0.29
TSFM-202ENST00000417094 CICQ96RK0 1608 aaPredicted RBP13.23□□□□□ -0.29
TSFM-202ENST00000417094 CDCA8Q53HL2 280 aa13.22□□□□□ -0.29
TSFM-202ENST00000417094 HSP90AB2PQ58FF8 381 aa13.22□□□□□ -0.29
TSFM-202ENST00000417094 KLHL34Q8N239 644 aa13.22□□□□□ -0.29
TSFM-202ENST00000417094 SMARCC1Q92922 1105 aaPredicted RBP13.21□□□□□ -0.29
TSFM-202ENST00000417094 KIF13BQ9NQT8 1826 aa13.2□□□□□ -0.3
TSFM-202ENST00000417094 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.2□□□□□ -0.3
TSFM-202ENST00000417094 ATP10DQ9P241 1426 aa13.2□□□□□ -0.3
TSFM-202ENST00000417094 MSL1Q68DK7 614 aa13.19□□□□□ -0.3
TSFM-202ENST00000417094 PELP1Q8IZL8 1130 aaKnown RBP13.19□□□□□ -0.3
TSFM-202ENST00000417094 CARD14Q9BXL6 1004 aa13.19□□□□□ -0.3
TSFM-202ENST00000417094 KIAA1551Q9HCM1 1747 aa13.19□□□□□ -0.3
TSFM-202ENST00000417094 WASHC2AQ641Q2 1341 aa13.18□□□□□ -0.3
TSFM-202ENST00000417094 SSFA2P28290 1259 aa13.18□□□□□ -0.3
TSFM-202ENST00000417094 AMIGO3Q86WK7 504 aa13.18□□□□□ -0.3
TSFM-202ENST00000417094 PIGBQ92521 554 aa13.18□□□□□ -0.3
TSFM-202ENST00000417094 MSH5O43196 834 aa13.17□□□□□ -0.3
TSFM-202ENST00000417094 MPRIPQ6WCQ1 1025 aa13.17□□□□□ -0.3
TSFM-202ENST00000417094 AK7Q96M32 723 aa13.17□□□□□ -0.3
TSFM-202ENST00000417094 EMILIN1Q9Y6C2 1016 aa13.17□□□□□ -0.3
TSFM-202ENST00000417094 COL5A3P25940 1745 aaPredicted RBP13.16□□□□□ -0.3
TSFM-202ENST00000417094 SPG7Q9UQ90 795 aa13.16□□□□□ -0.3
TSFM-202ENST00000417094 KDRP35968 1356 aa13.16□□□□□ -0.3
TSFM-202ENST00000417094 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.15□□□□□ -0.3
TSFM-202ENST00000417094 LOC102724428A0A0B4J2F2 783 aa13.15□□□□□ -0.3
TSFM-202ENST00000417094 SIK1P57059 783 aa13.15□□□□□ -0.3
TSFM-202ENST00000417094 IGSF1Q8N6C5 1336 aa13.13□□□□□ -0.31
TSFM-202ENST00000417094 LINC00116Q8NCU8 138 aa13.13□□□□□ -0.31
TSFM-202ENST00000417094 EYA1Q99502 592 aa13.13□□□□□ -0.31
TSFM-202ENST00000417094 BRCA1P38398 1863 aaKnown RBP13.12□□□□□ -0.31
TSFM-202ENST00000417094 PXDNLA1KZ92 1463 aa13.12□□□□□ -0.31
TSFM-202ENST00000417094 PHKG2P15735 406 aa13.12□□□□□ -0.31
TSFM-202ENST00000417094 TMOD3Q9NYL9 352 aa13.12□□□□□ -0.31
TSFM-202ENST00000417094 TIMELESSQ9UNS1 1208 aa13.12□□□□□ -0.31
TSFM-202ENST00000417094 C10orf71Q711Q0 1435 aa13.12□□□□□ -0.31
TSFM-202ENST00000417094 C4AP0C0L4 1744 aa13.11□□□□□ -0.31
TSFM-202ENST00000417094 ITPK1Q13572 414 aa13.11□□□□□ -0.31
TSFM-202ENST00000417094 IFNL2Q8IZJ0 200 aa13.11□□□□□ -0.31
TSFM-202ENST00000417094 GPBP1L1Q9HC44 474 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms