RNA–Protein interactions for RNA: ENST00000416804.1

HLA-DPB1-210, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

APPRIS ALT2

Gene HLA-DPB1, Length 1,361 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-210ENST00000416804 GRIN3BO60391 1043 aa22.16■■□□□ 1.14
HLA-DPB1-210ENST00000416804 KCNQ4P56696 695 aa22.16■■□□□ 1.14
HLA-DPB1-210ENST00000416804 GOLGB1Q14789 3259 aaKnown RBP22.16■■□□□ 1.14
HLA-DPB1-210ENST00000416804 NSD2O96028 1365 aa22.16■■□□□ 1.14
HLA-DPB1-210ENST00000416804 ZCRB1Q8TBF4 217 aaKnown RBP22.15■■□□□ 1.14
HLA-DPB1-210ENST00000416804 LY75O60449 1722 aa22.15■■□□□ 1.14
HLA-DPB1-210ENST00000416804 TUBGCP6Q96RT7 1819 aa22.15■■□□□ 1.14
HLA-DPB1-210ENST00000416804 DOT1LQ8TEK3 1739 aa22.14■■□□□ 1.14
HLA-DPB1-210ENST00000416804 CCNL1Q9UK58 526 aaPredicted RBP22.14■■□□□ 1.14
HLA-DPB1-210ENST00000416804 SHANK3Q9BYB0 1731 aa22.13■■□□□ 1.13
HLA-DPB1-210ENST00000416804 MAP3K19Q56UN5 1328 aa22.13■■□□□ 1.13
HLA-DPB1-210ENST00000416804 HOXC9P31274 260 aa22.12■■□□□ 1.13
HLA-DPB1-210ENST00000416804 COG3Q96JB2 828 aa22.12■■□□□ 1.13
HLA-DPB1-210ENST00000416804 AMPHP49418 695 aa22.12■■□□□ 1.13
HLA-DPB1-210ENST00000416804 USP47Q96K76 1375 aa22.11■■□□□ 1.13
HLA-DPB1-210ENST00000416804 YBX3P16989 372 aaKnown RBP eCLIP22.11■■□□□ 1.13
HLA-DPB1-210ENST00000416804 HMGB2P26583 209 aaKnown RBP22.11■■□□□ 1.13
HLA-DPB1-210ENST00000416804 MEGF6O75095 1541 aa22.1■■□□□ 1.13
HLA-DPB1-210ENST00000416804 MSH5O43196 834 aa22.1■■□□□ 1.13
HLA-DPB1-210ENST00000416804 COL23A1Q86Y22 540 aaPredicted RBP22.1■■□□□ 1.13
HLA-DPB1-210ENST00000416804 CGNL1Q0VF96 1302 aa22.08■■□□□ 1.13
HLA-DPB1-210ENST00000416804 RTL1A6NKG5 1358 aa22.08■■□□□ 1.13
HLA-DPB1-210ENST00000416804 IFFO2Q5TF58 517 aa22.08■■□□□ 1.12
HLA-DPB1-210ENST00000416804 FLAD1Q8NFF5 587 aa22.05■■□□□ 1.12
HLA-DPB1-210ENST00000416804 CD2APQ9Y5K6 639 aa22.05■■□□□ 1.12
HLA-DPB1-210ENST00000416804 ATP10DQ9P241 1426 aa22.04■■□□□ 1.12
HLA-DPB1-210ENST00000416804 MSL1Q68DK7 614 aa22.04■■□□□ 1.12
HLA-DPB1-210ENST00000416804 CEP350Q5VT06 3117 aa22.04■■□□□ 1.12
HLA-DPB1-210ENST00000416804 SLC24A1O60721 1099 aa22.03■■□□□ 1.12
HLA-DPB1-210ENST00000416804 NBPF6Q5VWK0 638 aa22.03■■□□□ 1.12
HLA-DPB1-210ENST00000416804 RAPGEF4Q8WZA2 1011 aa22.03■■□□□ 1.12
HLA-DPB1-210ENST00000416804 NBPF4Q96M43 638 aa22.03■■□□□ 1.12
HLA-DPB1-210ENST00000416804 SMG6Q86US8 1419 aaKnown RBP22.03■■□□□ 1.12
HLA-DPB1-210ENST00000416804 FBLN1P23142 703 aa22.02■■□□□ 1.12
HLA-DPB1-210ENST00000416804 RGPD2P0DJD1 1756 aa22.01■■□□□ 1.11
HLA-DPB1-210ENST00000416804 TESK2Q96S53 571 aa22.01■■□□□ 1.11
HLA-DPB1-210ENST00000416804 TATP17735 454 aaPredicted RBP22■■□□□ 1.11
HLA-DPB1-210ENST00000416804 PCDH11XQ9BZA7 1347 aa22■■□□□ 1.11
HLA-DPB1-210ENST00000416804 PCDH11YQ9BZA8 1340 aa22■■□□□ 1.11
HLA-DPB1-210ENST00000416804 C5P01031 1676 aa22■■□□□ 1.11
HLA-DPB1-210ENST00000416804 GPBP1L1Q9HC44 474 aaPredicted RBP21.99■■□□□ 1.11
HLA-DPB1-210ENST00000416804 PALLDQ8WX93 1383 aa21.99■■□□□ 1.11
HLA-DPB1-210ENST00000416804 TONSLQ96HA7 1378 aa21.99■■□□□ 1.11
HLA-DPB1-210ENST00000416804 RRS1Q15050 365 aaKnown RBP21.99■■□□□ 1.11
HLA-DPB1-210ENST00000416804 USHBP1Q8N6Y0 703 aa21.99■■□□□ 1.11
HLA-DPB1-210ENST00000416804 ADCY9O60503 1353 aa21.98■■□□□ 1.11
HLA-DPB1-210ENST00000416804 ST20-MTHFSA0A0A6YYL1 179 aa21.96■■□□□ 1.11
HLA-DPB1-210ENST00000416804 INSRP06213 1382 aa21.95■■□□□ 1.1
HLA-DPB1-210ENST00000416804 FYB1O15117 783 aa21.95■■□□□ 1.1
HLA-DPB1-210ENST00000416804 MPRIPQ6WCQ1 1025 aa21.95■■□□□ 1.1
HLA-DPB1-210ENST00000416804 SMARCC1Q92922 1105 aaPredicted RBP21.95■■□□□ 1.1
HLA-DPB1-210ENST00000416804 NSD3Q9BZ95 1437 aa21.94■■□□□ 1.1
HLA-DPB1-210ENST00000416804 AK7Q96M32 723 aa21.94■■□□□ 1.1
HLA-DPB1-210ENST00000416804 GGNBP2Q9H3C7 697 aa21.94■■□□□ 1.1
HLA-DPB1-210ENST00000416804 KIF24Q5T7B8 1368 aa21.93■■□□□ 1.1
HLA-DPB1-210ENST00000416804 FLT4P35916 1363 aa21.93■■□□□ 1.1
HLA-DPB1-210ENST00000416804 TAF1LQ8IZX4 1826 aa21.92■■□□□ 1.1
HLA-DPB1-210ENST00000416804 HSPA6P17066 643 aa21.92■■□□□ 1.1
HLA-DPB1-210ENST00000416804 HSP90AB2PQ58FF8 381 aa21.92■■□□□ 1.1
HLA-DPB1-210ENST00000416804 C4BP0C0L5 1744 aa21.92■■□□□ 1.1
HLA-DPB1-210ENST00000416804 IGSF1Q8N6C5 1336 aa21.91■■□□□ 1.1
HLA-DPB1-210ENST00000416804 CYP27B1O15528 508 aa21.9■■□□□ 1.1
HLA-DPB1-210ENST00000416804 ZNF526Q8TF50 670 aaPredicted RBP21.89■■□□□ 1.1
HLA-DPB1-210ENST00000416804 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.88■■□□□ 1.09
HLA-DPB1-210ENST00000416804 PHF14O94880 888 aa21.87■■□□□ 1.09
HLA-DPB1-210ENST00000416804 SSFA2P28290 1259 aa21.87■■□□□ 1.09
HLA-DPB1-210ENST00000416804 AMIGO3Q86WK7 504 aa21.87■■□□□ 1.09
HLA-DPB1-210ENST00000416804 TOGARAM1Q9Y4F4 1720 aa21.87■■□□□ 1.09
HLA-DPB1-210ENST00000416804 TMF1P82094 1093 aa21.87■■□□□ 1.09
HLA-DPB1-210ENST00000416804 PIGBQ92521 554 aa21.86■■□□□ 1.09
HLA-DPB1-210ENST00000416804 UBR3Q6ZT12 1888 aa21.85■■□□□ 1.09
HLA-DPB1-210ENST00000416804 NKX1-1Q15270 411 aaPredicted RBP21.85■■□□□ 1.09
HLA-DPB1-210ENST00000416804 PKD1L3Q7Z443 1732 aa21.84■■□□□ 1.09
HLA-DPB1-210ENST00000416804 ITGB4P16144 1822 aa21.84■■□□□ 1.09
HLA-DPB1-210ENST00000416804 LOC102724428A0A0B4J2F2 783 aa21.84■■□□□ 1.09
HLA-DPB1-210ENST00000416804 SIK1P57059 783 aa21.84■■□□□ 1.09
HLA-DPB1-210ENST00000416804 NCAPD2Q15021 1401 aa21.83■■□□□ 1.08
HLA-DPB1-210ENST00000416804 WWC3Q9ULE0 1092 aa21.83■■□□□ 1.08
HLA-DPB1-210ENST00000416804 SPG7Q9UQ90 795 aa21.83■■□□□ 1.08
HLA-DPB1-210ENST00000416804 CDCA8Q53HL2 280 aa21.82■■□□□ 1.08
HLA-DPB1-210ENST00000416804 LINC00116Q8NCU8 138 aa21.82■■□□□ 1.08
HLA-DPB1-210ENST00000416804 KIF20BQ96Q89 1820 aa21.82■■□□□ 1.08
HLA-DPB1-210ENST00000416804 KIF3CO14782 793 aa21.81■■□□□ 1.08
HLA-DPB1-210ENST00000416804 CICQ96RK0 1608 aaPredicted RBP21.8■■□□□ 1.08
HLA-DPB1-210ENST00000416804 SMIM5Q71RC9 77 aa21.8■■□□□ 1.08
HLA-DPB1-210ENST00000416804 TMOD3Q9NYL9 352 aa21.8■■□□□ 1.08
HLA-DPB1-210ENST00000416804 MAP2P11137 1827 aaKnown RBP21.8■■□□□ 1.08
HLA-DPB1-210ENST00000416804 GNPATO15228 680 aa21.79■■□□□ 1.08
HLA-DPB1-210ENST00000416804 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.79■■□□□ 1.08
HLA-DPB1-210ENST00000416804 EMILIN1Q9Y6C2 1016 aa21.79■■□□□ 1.08
HLA-DPB1-210ENST00000416804 ATP6V1AP38606 617 aa21.76■■□□□ 1.07
HLA-DPB1-210ENST00000416804 ITPK1Q13572 414 aa21.76■■□□□ 1.07
HLA-DPB1-210ENST00000416804 PXDNLA1KZ92 1463 aa21.75■■□□□ 1.07
HLA-DPB1-210ENST00000416804 MMP10P09238 476 aa21.75■■□□□ 1.07
HLA-DPB1-210ENST00000416804 ASAP1Q9ULH1 1129 aa21.75■■□□□ 1.07
HLA-DPB1-210ENST00000416804 WASHC2AQ641Q2 1341 aa21.74■■□□□ 1.07
HLA-DPB1-210ENST00000416804 PPM1GO15355 546 aaPredicted RBP21.74■■□□□ 1.07
HLA-DPB1-210ENST00000416804 APLP1P51693 650 aa21.74■■□□□ 1.07
HLA-DPB1-210ENST00000416804 TGFB2P61812 414 aa21.74■■□□□ 1.07
HLA-DPB1-210ENST00000416804 IFNL2Q8IZJ0 200 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms