RNA–Protein interactions for RNA: ENST00000416581.1

LINC01398-201, Transcript of long intergenic non-protein coding RNA 1398, humanhuman

TSL 1 (best)

Gene LINC01398, Length 1,129 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01398-201ENST00000416581 INSRP06213 1382 aa18.6■□□□□ 0.57
LINC01398-201ENST00000416581 FYB1O15117 783 aa18.6■□□□□ 0.57
LINC01398-201ENST00000416581 ATF5Q9Y2D1 282 aaPredicted RBP18.6■□□□□ 0.57
LINC01398-201ENST00000416581 SHANK3Q9BYB0 1731 aa18.6■□□□□ 0.57
LINC01398-201ENST00000416581 PDGFDQ9GZP0 370 aaPredicted RBP18.59■□□□□ 0.57
LINC01398-201ENST00000416581 MEGF6O75095 1541 aa18.59■□□□□ 0.57
LINC01398-201ENST00000416581 RGPD2P0DJD1 1756 aa18.58■□□□□ 0.57
LINC01398-201ENST00000416581 SYTL4Q96C24 671 aaPredicted RBP18.58■□□□□ 0.56
LINC01398-201ENST00000416581 ARXQ96QS3 562 aa18.58■□□□□ 0.56
LINC01398-201ENST00000416581 TATP17735 454 aaPredicted RBP18.57■□□□□ 0.56
LINC01398-201ENST00000416581 POLD1P28340 1107 aa18.57■□□□□ 0.56
LINC01398-201ENST00000416581 SGIP1Q9BQI5 828 aa18.57■□□□□ 0.56
LINC01398-201ENST00000416581 SYT17Q9BSW7 474 aa18.57■□□□□ 0.56
LINC01398-201ENST00000416581 GGNBP2Q9H3C7 697 aa18.57■□□□□ 0.56
LINC01398-201ENST00000416581 PCDH11XQ9BZA7 1347 aa18.56■□□□□ 0.56
LINC01398-201ENST00000416581 PCDH11YQ9BZA8 1340 aa18.56■□□□□ 0.56
LINC01398-201ENST00000416581 AKT1S1Q96B36 256 aa18.56■□□□□ 0.56
LINC01398-201ENST00000416581 FHDC1Q9C0D6 1143 aaPredicted RBP18.56■□□□□ 0.56
LINC01398-201ENST00000416581 COL24A1Q17RW2 1714 aa18.55■□□□□ 0.56
LINC01398-201ENST00000416581 PRIM1P49642 420 aaKnown RBP18.55■□□□□ 0.56
LINC01398-201ENST00000416581 RRS1Q15050 365 aaKnown RBP18.55■□□□□ 0.56
LINC01398-201ENST00000416581 LRRC4BQ9NT99 713 aa18.55■□□□□ 0.56
LINC01398-201ENST00000416581 ZNF827Q17R98 1081 aa18.54■□□□□ 0.56
LINC01398-201ENST00000416581 PCGF6Q9BYE7 350 aa18.54■□□□□ 0.56
LINC01398-201ENST00000416581 TFCP2L1Q9NZI6 479 aa18.54■□□□□ 0.56
LINC01398-201ENST00000416581 NSD2O96028 1365 aa18.54■□□□□ 0.56
LINC01398-201ENST00000416581 CHD4Q14839 1912 aa18.53■□□□□ 0.56
LINC01398-201ENST00000416581 NBPF6Q5VWK0 638 aa18.53■□□□□ 0.56
LINC01398-201ENST00000416581 NBPF4Q96M43 638 aa18.53■□□□□ 0.56
LINC01398-201ENST00000416581 ANKRD26Q9UPS8 1709 aa18.53■□□□□ 0.56
LINC01398-201ENST00000416581 NSD3Q9BZ95 1437 aa18.52■□□□□ 0.56
LINC01398-201ENST00000416581 CCNL1Q9UK58 526 aaPredicted RBP18.52■□□□□ 0.56
LINC01398-201ENST00000416581 PLEKHG2Q9H7P9 1386 aa18.51■□□□□ 0.55
LINC01398-201ENST00000416581 TUBGCP6Q96RT7 1819 aa18.51■□□□□ 0.55
LINC01398-201ENST00000416581 PNPLA7Q6ZV29 1317 aa18.5■□□□□ 0.55
LINC01398-201ENST00000416581 PKD1L3Q7Z443 1732 aa18.5■□□□□ 0.55
LINC01398-201ENST00000416581 FBLN1P23142 703 aa18.49■□□□□ 0.55
LINC01398-201ENST00000416581 FLAD1Q8NFF5 587 aa18.49■□□□□ 0.55
LINC01398-201ENST00000416581 C5P01031 1676 aa18.49■□□□□ 0.55
LINC01398-201ENST00000416581 NCAPD2Q15021 1401 aa18.49■□□□□ 0.55
LINC01398-201ENST00000416581 HSP90AB2PQ58FF8 381 aa18.48■□□□□ 0.55
LINC01398-201ENST00000416581 SMARCC1Q92922 1105 aaPredicted RBP18.48■□□□□ 0.55
LINC01398-201ENST00000416581 IFFO2Q5TF58 517 aa18.46■□□□□ 0.55
LINC01398-201ENST00000416581 USHBP1Q8N6Y0 703 aa18.46■□□□□ 0.55
LINC01398-201ENST00000416581 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.46■□□□□ 0.55
LINC01398-201ENST00000416581 SPG7Q9UQ90 795 aa18.46■□□□□ 0.55
LINC01398-201ENST00000416581 WASHC2AQ641Q2 1341 aa18.46■□□□□ 0.55
LINC01398-201ENST00000416581 PALLDQ8WX93 1383 aa18.45■□□□□ 0.54
LINC01398-201ENST00000416581 CARD14Q9BXL6 1004 aa18.44■□□□□ 0.54
LINC01398-201ENST00000416581 MAP2P11137 1827 aaKnown RBP18.44■□□□□ 0.54
LINC01398-201ENST00000416581 TAF1LQ8IZX4 1826 aa18.44■□□□□ 0.54
LINC01398-201ENST00000416581 GPR162Q16538 588 aa18.43■□□□□ 0.54
LINC01398-201ENST00000416581 ITGB4P16144 1822 aa18.43■□□□□ 0.54
LINC01398-201ENST00000416581 EMILIN1Q9Y6C2 1016 aa18.42■□□□□ 0.54
LINC01398-201ENST00000416581 PPM1GO15355 546 aaPredicted RBP18.41■□□□□ 0.54
LINC01398-201ENST00000416581 MSH5O43196 834 aa18.41■□□□□ 0.54
LINC01398-201ENST00000416581 NKX1-1Q15270 411 aaPredicted RBP18.41■□□□□ 0.54
LINC01398-201ENST00000416581 KLHL34Q8N239 644 aa18.41■□□□□ 0.54
LINC01398-201ENST00000416581 TOGARAM1Q9Y4F4 1720 aa18.4■□□□□ 0.54
LINC01398-201ENST00000416581 CYP27B1O15528 508 aa18.4■□□□□ 0.54
LINC01398-201ENST00000416581 MPRIPQ6WCQ1 1025 aa18.4■□□□□ 0.54
LINC01398-201ENST00000416581 ZNF784Q8NCA9 323 aaPredicted RBP18.4■□□□□ 0.54
LINC01398-201ENST00000416581 GRIN3BO60391 1043 aa18.39■□□□□ 0.53
LINC01398-201ENST00000416581 KCNQ4P56696 695 aa18.39■□□□□ 0.53
LINC01398-201ENST00000416581 EIF4G2P78344 907 aaKnown RBP eCLIP18.39■□□□□ 0.53
LINC01398-201ENST00000416581 C4BP0C0L5 1744 aa18.39■□□□□ 0.53
LINC01398-201ENST00000416581 COL23A1Q86Y22 540 aaPredicted RBP18.38■□□□□ 0.53
LINC01398-201ENST00000416581 AK7Q96M32 723 aa18.38■□□□□ 0.53
LINC01398-201ENST00000416581 SENP3-EIF4A1A0A087X0R7 540 aa18.37■□□□□ 0.53
LINC01398-201ENST00000416581 IFNL2Q8IZJ0 200 aa18.37■□□□□ 0.53
LINC01398-201ENST00000416581 TMOD3Q9NYL9 352 aa18.37■□□□□ 0.53
LINC01398-201ENST00000416581 POLKQ9UBT6 870 aa18.36■□□□□ 0.53
LINC01398-201ENST00000416581 HSP90AB1P08238 724 aaKnown RBP18.35■□□□□ 0.53
LINC01398-201ENST00000416581 EYA1Q99502 592 aa18.35■□□□□ 0.53
LINC01398-201ENST00000416581 CD2APQ9Y5K6 639 aa18.35■□□□□ 0.53
LINC01398-201ENST00000416581 UBR3Q6ZT12 1888 aa18.35■□□□□ 0.53
LINC01398-201ENST00000416581 SSFA2P28290 1259 aa18.34■□□□□ 0.53
LINC01398-201ENST00000416581 POLR3GLQ9BT43 218 aa18.34■□□□□ 0.53
LINC01398-201ENST00000416581 PELP1Q8IZL8 1130 aaKnown RBP18.33■□□□□ 0.52
LINC01398-201ENST00000416581 PIGBQ92521 554 aa18.33■□□□□ 0.52
LINC01398-201ENST00000416581 ZNF831Q5JPB2 1677 aa18.33■□□□□ 0.52
LINC01398-201ENST00000416581 LOC102724428A0A0B4J2F2 783 aa18.32■□□□□ 0.52
LINC01398-201ENST00000416581 PHKG2P15735 406 aa18.32■□□□□ 0.52
LINC01398-201ENST00000416581 SIK1P57059 783 aa18.32■□□□□ 0.52
LINC01398-201ENST00000416581 IGSF1Q8N6C5 1336 aa18.31■□□□□ 0.52
LINC01398-201ENST00000416581 EIF4A2Q14240 407 aaKnown RBP18.31■□□□□ 0.52
LINC01398-201ENST00000416581 AMOTQ4VCS5 1084 aa18.3■□□□□ 0.52
LINC01398-201ENST00000416581 NLGN2Q8NFZ4 835 aa18.3■□□□□ 0.52
LINC01398-201ENST00000416581 ERVV-2B6SEH9 535 aa18.29■□□□□ 0.52
LINC01398-201ENST00000416581 C1QTNF8P60827 252 aa18.29■□□□□ 0.52
LINC01398-201ENST00000416581 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.28■□□□□ 0.52
LINC01398-201ENST00000416581 PLEKHO1Q53GL0 409 aaPredicted RBP18.28■□□□□ 0.52
LINC01398-201ENST00000416581 MSL1Q68DK7 614 aa18.28■□□□□ 0.52
LINC01398-201ENST00000416581 DCAF5Q96JK2 942 aa18.28■□□□□ 0.52
LINC01398-201ENST00000416581 HSPA5P11021 654 aaKnown RBP18.27■□□□□ 0.52
LINC01398-201ENST00000416581 PANK3Q9H999 370 aa18.27■□□□□ 0.52
LINC01398-201ENST00000416581 GIGYF1O75420 1035 aaPredicted RBP18.26■□□□□ 0.51
LINC01398-201ENST00000416581 ATP6V1AP38606 617 aa18.26■□□□□ 0.51
LINC01398-201ENST00000416581 TNNT2P45379 298 aaPredicted RBP18.26■□□□□ 0.51
LINC01398-201ENST00000416581 GNPATO15228 680 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms