RNA–Protein interactions for RNA: ENST00000416330.1

XIST-201, X inactive specific transcript, humanhuman

TSL 2 BASIC

Gene XIST, Length 750 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-201ENST00000416330 ARID4BQ4LE39 1312 aaPredicted RBP8.8□□□□□ -1
XIST-201ENST00000416330 IGHA1P01876 353 aa8.8□□□□□ -1
XIST-201ENST00000416330 KRT76Q01546 638 aa8.8□□□□□ -1
XIST-201ENST00000416330 GPAT2Q6NUI2 795 aa8.8□□□□□ -1
XIST-201ENST00000416330 TRMT44Q8IYL2 757 aaKnown RBP8.8□□□□□ -1
XIST-201ENST00000416330 NANOS1Q8WY41 292 aaKnown RBP8.8□□□□□ -1
XIST-201ENST00000416330 ZNF592Q92610 1267 aa8.8□□□□□ -1
XIST-201ENST00000416330 CARD14Q9BXL6 1004 aa8.8□□□□□ -1
XIST-201ENST00000416330 CDC14CA4D256 554 aa8.79□□□□□ -1
XIST-201ENST00000416330 IRS1P35568 1242 aa8.79□□□□□ -1
XIST-201ENST00000416330 SV2AQ7L0J3 742 aa8.79□□□□□ -1
XIST-201ENST00000416330 SH3RF1Q7Z6J0 888 aa8.79□□□□□ -1
XIST-201ENST00000416330 GOPCQ9HD26 462 aa8.79□□□□□ -1
XIST-201ENST00000416330 PPP1R15AO75807 674 aaPredicted RBP8.78□□□□□ -1
XIST-201ENST00000416330 ZNF385CQ66K41 422 aaPredicted RBP8.78□□□□□ -1
XIST-201ENST00000416330 KANK3Q6NY19 840 aa8.78□□□□□ -1
XIST-201ENST00000416330 SH3BP5LQ7L8J4 393 aa8.78□□□□□ -1
XIST-201ENST00000416330 GPKOWQ92917 476 aaPredicted RBP eCLIP8.78□□□□□ -1
XIST-201ENST00000416330 SCARF2Q96GP6 870 aaPredicted RBP8.78□□□□□ -1
XIST-201ENST00000416330 BCCIPQ9P287 314 aaKnown RBP eCLIP8.78□□□□□ -1
XIST-201ENST00000416330 DNMT3AQ9Y6K1 912 aaPredicted RBP8.78□□□□□ -1
XIST-201ENST00000416330 CANXP27824 592 aaKnown RBP8.77□□□□□ -1.01
XIST-201ENST00000416330 FOXK2Q01167 660 aa8.77□□□□□ -1.01
XIST-201ENST00000416330 DHX9Q08211 1270 aaKnown RBP8.77□□□□□ -1.01
XIST-201ENST00000416330 PPP1R26Q5T8A7 1209 aaPredicted RBP8.77□□□□□ -1.01
XIST-201ENST00000416330 VWA5B2Q8N398 1253 aa8.77□□□□□ -1.01
XIST-201ENST00000416330 POLR3EQ9NVU0 708 aa8.77□□□□□ -1.01
XIST-201ENST00000416330 SPINT1O43278 529 aa8.76□□□□□ -1.01
XIST-201ENST00000416330 MAP3K10Q02779 954 aa8.76□□□□□ -1.01
XIST-201ENST00000416330 BRPF3Q9ULD4 1205 aa8.76□□□□□ -1.01
XIST-201ENST00000416330 BRD1O95696 1058 aa8.75□□□□□ -1.01
XIST-201ENST00000416330 PSMD1Q99460 953 aa8.75□□□□□ -1.01
XIST-201ENST00000416330 CDV3Q9UKY7 258 aaKnown RBP8.75□□□□□ -1.01
XIST-201ENST00000416330 SMARCA5O60264 1052 aaPredicted RBP8.74□□□□□ -1.01
XIST-201ENST00000416330 ITGA6P23229 1130 aa8.74□□□□□ -1.01
XIST-201ENST00000416330 CBLBQ13191 982 aa8.74□□□□□ -1.01
XIST-201ENST00000416330 Q6ZVU0 165 aa8.74□□□□□ -1.01
XIST-201ENST00000416330 TICAM2Q86XR7 235 aa8.74□□□□□ -1.01
XIST-201ENST00000416330 PCMTD1Q96MG8 357 aaPredicted RBP8.74□□□□□ -1.01
XIST-201ENST00000416330 SLC35F4A4IF30 521 aa8.73□□□□□ -1.01
XIST-201ENST00000416330 SLURP2P0DP57 97 aa8.73□□□□□ -1.01
XIST-201ENST00000416330 ERFEQ4G0M1 354 aa8.73□□□□□ -1.01
XIST-201ENST00000416330 RNFT1Q5M7Z0 435 aa8.73□□□□□ -1.01
XIST-201ENST00000416330 CC2D2BQ6DHV5 1058 aa8.73□□□□□ -1.01
XIST-201ENST00000416330 SLC10A4Q96EP9 437 aa8.73□□□□□ -1.01
XIST-201ENST00000416330 ARHGAP9Q9BRR9 750 aa8.73□□□□□ -1.01
XIST-201ENST00000416330 POLMQ9NP87 494 aaPredicted RBP8.73□□□□□ -1.01
XIST-201ENST00000416330 ENAMQ9NRM1 1142 aa8.73□□□□□ -1.01
XIST-201ENST00000416330 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.73□□□□□ -1.01
XIST-201ENST00000416330 ACIN1Q9UKV3 1341 aaKnown RBP8.73□□□□□ -1.01
XIST-201ENST00000416330 CTDSPL2Q05D32 466 aa8.72□□□□□ -1.01
XIST-201ENST00000416330 SND1Q7KZF4 910 aaKnown RBP eCLIP8.72□□□□□ -1.01
XIST-201ENST00000416330 ZBTB33Q86T24 672 aa8.72□□□□□ -1.01
XIST-201ENST00000416330 RELBQ01201 579 aa8.71□□□□□ -1.02
XIST-201ENST00000416330 FBXO31Q5XUX0 539 aaPredicted RBP8.71□□□□□ -1.02
XIST-201ENST00000416330 LRRN4Q8WUT4 740 aa8.71□□□□□ -1.02
XIST-201ENST00000416330 SPATA32Q96LK8 384 aa8.71□□□□□ -1.02
XIST-201ENST00000416330 KCTD15Q96SI1 283 aaPredicted RBP8.71□□□□□ -1.02
XIST-201ENST00000416330 IVNS1ABPQ9Y6Y0 642 aa8.71□□□□□ -1.02
XIST-201ENST00000416330 CADPSQ9ULU8 1353 aa8.71□□□□□ -1.02
XIST-201ENST00000416330 WHAMMQ8TF30 809 aa8.7□□□□□ -1.02
XIST-201ENST00000416330 ARHGEF15O94989 841 aa8.69□□□□□ -1.02
XIST-201ENST00000416330 PDXDC2PQ6P474 469 aa8.69□□□□□ -1.02
XIST-201ENST00000416330 INSM2Q96T92 566 aaPredicted RBP8.69□□□□□ -1.02
XIST-201ENST00000416330 ADAMTS2O95450 1211 aa8.68□□□□□ -1.02
XIST-201ENST00000416330 CTSOP43234 321 aaPredicted RBP8.68□□□□□ -1.02
XIST-201ENST00000416330 AGBL1Q96MI9 1066 aa8.68□□□□□ -1.02
XIST-201ENST00000416330 FKBPLQ9UIM3 349 aa8.68□□□□□ -1.02
XIST-201ENST00000416330 RBM47A0AV96 593 aaKnown RBP8.67□□□□□ -1.02
XIST-201ENST00000416330 CLSTN1O94985 981 aa8.67□□□□□ -1.02
XIST-201ENST00000416330 TMED8Q6PL24 325 aaPredicted RBP8.67□□□□□ -1.02
XIST-201ENST00000416330 ANKRD13AQ8IZ07 590 aa8.67□□□□□ -1.02
XIST-201ENST00000416330 TRIM52Q96A61 297 aa8.67□□□□□ -1.02
XIST-201ENST00000416330 KIAA1522Q9P206 1035 aaPredicted RBP8.67□□□□□ -1.02
XIST-201ENST00000416330 COG6Q9Y2V7 657 aa8.67□□□□□ -1.02
XIST-201ENST00000416330 ZNF330Q9Y3S2 320 aaPredicted RBP8.67□□□□□ -1.02
XIST-201ENST00000416330 PHF20L1A8MW92 1017 aa8.66□□□□□ -1.02
XIST-201ENST00000416330 NEFLP07196 543 aa8.66□□□□□ -1.02
XIST-201ENST00000416330 SRSF11Q05519 484 aaKnown RBP8.66□□□□□ -1.02
XIST-201ENST00000416330 NR6A1Q15406 480 aa8.66□□□□□ -1.02
XIST-201ENST00000416330 SH3D19Q5HYK7 790 aa8.66□□□□□ -1.02
XIST-201ENST00000416330 FOXR1Q6PIV2 292 aa8.66□□□□□ -1.02
XIST-201ENST00000416330 PROCA1Q8NCQ7 364 aaPredicted RBP8.66□□□□□ -1.02
XIST-201ENST00000416330 PTK2Q05397 1052 aa8.65□□□□□ -1.02
XIST-201ENST00000416330 SKIV2LQ15477 1246 aaKnown RBP8.65□□□□□ -1.02
XIST-201ENST00000416330 ZNF395Q9H8N7 513 aaPredicted RBP8.65□□□□□ -1.02
XIST-201ENST00000416330 NCLP19338 710 aaKnown RBP8.64□□□□□ -1.03
XIST-201ENST00000416330 IRX6P78412 446 aaPredicted RBP8.64□□□□□ -1.03
XIST-201ENST00000416330 NBPF20Q3BBV1 942 aa8.64□□□□□ -1.03
XIST-201ENST00000416330 LYPD4Q6UWN0 246 aa8.64□□□□□ -1.03
XIST-201ENST00000416330 PODNQ7Z5L7 613 aa8.64□□□□□ -1.03
XIST-201ENST00000416330 ZNF526Q8TF50 670 aaPredicted RBP8.64□□□□□ -1.03
XIST-201ENST00000416330 DRC1Q96MC2 740 aa8.64□□□□□ -1.03
XIST-201ENST00000416330 OCSTAMPQ9BR26 566 aa8.64□□□□□ -1.03
XIST-201ENST00000416330 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.64□□□□□ -1.03
XIST-201ENST00000416330 ATP1B4Q9UN42 357 aaPredicted RBP8.64□□□□□ -1.03
XIST-201ENST00000416330 USTQ9Y2C2 406 aa8.64□□□□□ -1.03
XIST-201ENST00000416330 ZC3H4Q9UPT8 1303 aaKnown RBP8.63□□□□□ -1.03
XIST-201ENST00000416330 MSTNO14793 375 aa8.63□□□□□ -1.03
XIST-201ENST00000416330 PNMA1Q8ND90 353 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms