RNA–Protein interactions for RNA: ENST00000416078.1

NCLP2-201, Transcript of nucleolin pseudogene 2, humanhuman

BASIC

Gene NCLP2, Length 1,462 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP2-201ENST00000416078 DNMT3AQ9Y6K1 912 aaPredicted RBP8.82□□□□□ -1
NCLP2-201ENST00000416078 ERVH48-1M5A8F1 160 aa8.81□□□□□ -1
NCLP2-201ENST00000416078 LINC00528Q8N1L1 170 aa8.81□□□□□ -1
NCLP2-201ENST00000416078 ZFP42Q96MM3 310 aa8.81□□□□□ -1
NCLP2-201ENST00000416078 LILRA1O75019 489 aa8.8□□□□□ -1
NCLP2-201ENST00000416078 GIGYF1O75420 1035 aaPredicted RBP8.8□□□□□ -1
NCLP2-201ENST00000416078 SCARF1Q14162 830 aa8.8□□□□□ -1
NCLP2-201ENST00000416078 WASHC4Q2M389 1173 aa8.8□□□□□ -1
NCLP2-201ENST00000416078 GPAT2Q6NUI2 795 aa8.8□□□□□ -1
NCLP2-201ENST00000416078 ERBB4Q15303 1308 aa8.79□□□□□ -1
NCLP2-201ENST00000416078 RNF20Q5VTR2 975 aa8.79□□□□□ -1
NCLP2-201ENST00000416078 ZNF784Q8NCA9 323 aaPredicted RBP8.79□□□□□ -1
NCLP2-201ENST00000416078 ABL2P42684 1182 aa8.78□□□□□ -1
NCLP2-201ENST00000416078 EIF4G2P78344 907 aaKnown RBP eCLIP8.78□□□□□ -1
NCLP2-201ENST00000416078 TRIM52Q96A61 297 aa8.78□□□□□ -1
NCLP2-201ENST00000416078 PURBQ96QR8 312 aaKnown RBP8.78□□□□□ -1
NCLP2-201ENST00000416078 TSEN34Q9BSV6 310 aaKnown RBP8.78□□□□□ -1
NCLP2-201ENST00000416078 TMPRSS4Q9NRS4 437 aa8.78□□□□□ -1
NCLP2-201ENST00000416078 CBLBQ13191 982 aa8.77□□□□□ -1
NCLP2-201ENST00000416078 UPP2O95045 317 aa8.76□□□□□ -1.01
NCLP2-201ENST00000416078 ADH1AP07327 375 aa8.76□□□□□ -1.01
NCLP2-201ENST00000416078 SOX11P35716 441 aa8.76□□□□□ -1.01
NCLP2-201ENST00000416078 ERVK-9P63128 1117 aa8.76□□□□□ -1.01
NCLP2-201ENST00000416078 VAC14Q08AM6 782 aa8.76□□□□□ -1.01
NCLP2-201ENST00000416078 POM121Q96HA1 1249 aa8.76□□□□□ -1.01
NCLP2-201ENST00000416078 CEP126Q9P2H0 1117 aa8.76□□□□□ -1.01
NCLP2-201ENST00000416078 SPINT1O43278 529 aa8.75□□□□□ -1.01
NCLP2-201ENST00000416078 ADAM23O75077 832 aa8.75□□□□□ -1.01
NCLP2-201ENST00000416078 RAB15P59190 212 aa8.75□□□□□ -1.01
NCLP2-201ENST00000416078 LCE3BQ5TA77 95 aa8.75□□□□□ -1.01
NCLP2-201ENST00000416078 TOP2AP11388 1531 aaKnown RBP8.74□□□□□ -1.01
NCLP2-201ENST00000416078 SOS2Q07890 1332 aaPredicted RBP8.74□□□□□ -1.01
NCLP2-201ENST00000416078 BTBD11A6QL63 1104 aa8.74□□□□□ -1.01
NCLP2-201ENST00000416078 BMP2P12643 396 aa8.74□□□□□ -1.01
NCLP2-201ENST00000416078 UBTFP17480 764 aaKnown RBP8.74□□□□□ -1.01
NCLP2-201ENST00000416078 PHTF2Q8N3S3 785 aa8.74□□□□□ -1.01
NCLP2-201ENST00000416078 KDF1Q8NAX2 398 aaPredicted RBP8.74□□□□□ -1.01
NCLP2-201ENST00000416078 CHIC2Q9UKJ5 165 aa8.74□□□□□ -1.01
NCLP2-201ENST00000416078 ADD1P35611 737 aaKnown RBP8.73□□□□□ -1.01
NCLP2-201ENST00000416078 C6orf118Q5T5N4 469 aa8.73□□□□□ -1.01
NCLP2-201ENST00000416078 RAD21O60216 631 aa8.72□□□□□ -1.01
NCLP2-201ENST00000416078 VSIG8P0DPA2 414 aa8.72□□□□□ -1.01
NCLP2-201ENST00000416078 CC2D2BQ6DHV5 1058 aa8.72□□□□□ -1.01
NCLP2-201ENST00000416078 CYLDQ9NQC7 956 aa8.72□□□□□ -1.01
NCLP2-201ENST00000416078 VEGFBP49765 207 aa8.7□□□□□ -1.02
NCLP2-201ENST00000416078 WWC1Q8IX03 1113 aa8.7□□□□□ -1.02
NCLP2-201ENST00000416078 AGBL1Q96MI9 1066 aa8.7□□□□□ -1.02
NCLP2-201ENST00000416078 CCDC85AQ96PX6 553 aaPredicted RBP8.7□□□□□ -1.02
NCLP2-201ENST00000416078 PCDHB11Q9Y5F2 797 aa8.7□□□□□ -1.02
NCLP2-201ENST00000416078 TRAK2O60296 914 aa8.7□□□□□ -1.02
NCLP2-201ENST00000416078 PTGIRP43119 386 aa8.7□□□□□ -1.02
NCLP2-201ENST00000416078 SCTRP47872 440 aa8.69□□□□□ -1.02
NCLP2-201ENST00000416078 ALG2Q9H553 416 aa8.69□□□□□ -1.02
NCLP2-201ENST00000416078 DNMT3LQ9UJW3 386 aa8.69□□□□□ -1.02
NCLP2-201ENST00000416078 TTLL8A6PVC2 850 aa8.68□□□□□ -1.02
NCLP2-201ENST00000416078 SUPT5HO00267 1087 aaKnown RBP8.68□□□□□ -1.02
NCLP2-201ENST00000416078 RELBQ01201 579 aa8.68□□□□□ -1.02
NCLP2-201ENST00000416078 OSBPL3Q9H4L5 887 aa8.68□□□□□ -1.02
NCLP2-201ENST00000416078 SEMA3FQ13275 785 aa8.67□□□□□ -1.02
NCLP2-201ENST00000416078 SLFNL1Q499Z3 407 aa8.67□□□□□ -1.02
NCLP2-201ENST00000416078 CYP2U1Q7Z449 544 aa8.67□□□□□ -1.02
NCLP2-201ENST00000416078 RNF135Q8IUD6 432 aa8.67□□□□□ -1.02
NCLP2-201ENST00000416078 FNBP4Q8N3X1 1017 aaPredicted RBP8.67□□□□□ -1.02
NCLP2-201ENST00000416078 SOBPA7XYQ1 873 aa8.66□□□□□ -1.02
NCLP2-201ENST00000416078 ATP5J2-PTCD1G3V325 749 aa8.66□□□□□ -1.02
NCLP2-201ENST00000416078 MAN1A2O60476 641 aa8.66□□□□□ -1.02
NCLP2-201ENST00000416078 FOXD4L5Q5VV16 416 aaPredicted RBP8.66□□□□□ -1.02
NCLP2-201ENST00000416078 ADAMTS8Q9UP79 889 aa8.66□□□□□ -1.02
NCLP2-201ENST00000416078 LAMC3Q9Y6N6 1575 aa8.66□□□□□ -1.02
NCLP2-201ENST00000416078 A6NJR5 290 aa8.65□□□□□ -1.02
NCLP2-201ENST00000416078 CTSOP43234 321 aaPredicted RBP8.65□□□□□ -1.02
NCLP2-201ENST00000416078 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.65□□□□□ -1.02
NCLP2-201ENST00000416078 KANK3Q6NY19 840 aa8.65□□□□□ -1.02
NCLP2-201ENST00000416078 RNF217Q8TC41 542 aa8.65□□□□□ -1.02
NCLP2-201ENST00000416078 INSM2Q96T92 566 aaPredicted RBP8.65□□□□□ -1.02
NCLP2-201ENST00000416078 CDCA7Q9BWT1 371 aaPredicted RBP8.65□□□□□ -1.02
NCLP2-201ENST00000416078 DOLKQ9UPQ8 538 aa8.65□□□□□ -1.02
NCLP2-201ENST00000416078 CADPSQ9ULU8 1353 aa8.65□□□□□ -1.02
NCLP2-201ENST00000416078 NESP48681 1621 aa8.65□□□□□ -1.03
NCLP2-201ENST00000416078 CCDC88BA6NC98 1476 aa8.65□□□□□ -1.03
NCLP2-201ENST00000416078 MAP7D1Q3KQU3 841 aa8.64□□□□□ -1.03
NCLP2-201ENST00000416078 PROSER2Q86WR7 435 aaPredicted RBP8.64□□□□□ -1.03
NCLP2-201ENST00000416078 CLUAP1Q96AJ1 413 aa8.64□□□□□ -1.03
NCLP2-201ENST00000416078 ZNF395Q9H8N7 513 aaPredicted RBP8.64□□□□□ -1.03
NCLP2-201ENST00000416078 POM121CA8CG34 1229 aa8.64□□□□□ -1.03
NCLP2-201ENST00000416078 GPC1P35052 558 aa8.64□□□□□ -1.03
NCLP2-201ENST00000416078 NFATC2IPQ8NCF5 419 aa8.64□□□□□ -1.03
NCLP2-201ENST00000416078 ADAMTS19Q8TE59 1207 aa8.64□□□□□ -1.03
NCLP2-201ENST00000416078 MYCP01106 439 aaPredicted RBP8.63□□□□□ -1.03
NCLP2-201ENST00000416078 RNF144AP50876 292 aaPredicted RBP8.63□□□□□ -1.03
NCLP2-201ENST00000416078 CLN3Q13286 438 aa8.63□□□□□ -1.03
NCLP2-201ENST00000416078 TSGA10IPQ3SY00 556 aa8.63□□□□□ -1.03
NCLP2-201ENST00000416078 PLPP7Q8NBV4 271 aa8.63□□□□□ -1.03
NCLP2-201ENST00000416078 POLMQ9NP87 494 aaPredicted RBP8.63□□□□□ -1.03
NCLP2-201ENST00000416078 GNRH1P01148 92 aa8.62□□□□□ -1.03
NCLP2-201ENST00000416078 Q8N3U1 123 aa8.62□□□□□ -1.03
NCLP2-201ENST00000416078 A0A1W2PRU2 124 aa8.61□□□□□ -1.03
NCLP2-201ENST00000416078 PIK3CDO00329 1044 aa8.61□□□□□ -1.03
NCLP2-201ENST00000416078 USP4Q13107 963 aa8.61□□□□□ -1.03
NCLP2-201ENST00000416078 SIRT1Q96EB6 747 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms