RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 RAPGEF4Q8WZA2 1011 aa34.44■■■■□ 3.1
HLA-C-204ENST00000415537 MEGF6O75095 1541 aa34.43■■■■□ 3.1
HLA-C-204ENST00000415537 ANO8Q9HCE9 1232 aaPredicted RBP34.42■■■■□ 3.1
HLA-C-204ENST00000415537 PANK3Q9H999 370 aa34.4■■■■□ 3.1
HLA-C-204ENST00000415537 TATP17735 454 aaPredicted RBP34.39■■■■□ 3.1
HLA-C-204ENST00000415537 STK32BQ9NY57 414 aa34.39■■■■□ 3.1
HLA-C-204ENST00000415537 SHANK3Q9BYB0 1731 aa34.38■■■■□ 3.09
HLA-C-204ENST00000415537 ANKRD26Q9UPS8 1709 aa34.38■■■■□ 3.09
HLA-C-204ENST00000415537 SYTL4Q96C24 671 aaPredicted RBP34.37■■■■□ 3.09
HLA-C-204ENST00000415537 SPON1Q9HCB6 807 aa34.36■■■■□ 3.09
HLA-C-204ENST00000415537 DOT1LQ8TEK3 1739 aa34.35■■■■□ 3.09
HLA-C-204ENST00000415537 WASHC2AQ641Q2 1341 aa34.33■■■■□ 3.09
HLA-C-204ENST00000415537 TNNT2P45379 298 aaPredicted RBP34.33■■■■□ 3.09
HLA-C-204ENST00000415537 PRIM1P49642 420 aaKnown RBP34.32■■■■□ 3.08
HLA-C-204ENST00000415537 SLC15A2Q16348 729 aa34.32■■■■□ 3.08
HLA-C-204ENST00000415537 POLKQ9UBT6 870 aa34.32■■■■□ 3.08
HLA-C-204ENST00000415537 PPP1R1BQ9UD71 204 aaPredicted RBP34.29■■■■□ 3.08
HLA-C-204ENST00000415537 PCDH11XQ9BZA7 1347 aa34.29■■■■□ 3.08
HLA-C-204ENST00000415537 PCDH11YQ9BZA8 1340 aa34.29■■■■□ 3.08
HLA-C-204ENST00000415537 CASZ1Q86V15 1759 aa34.28■■■■□ 3.08
HLA-C-204ENST00000415537 NSD2O96028 1365 aa34.26■■■■□ 3.08
HLA-C-204ENST00000415537 SLC27A3Q5K4L6 730 aa34.24■■■■□ 3.07
HLA-C-204ENST00000415537 PDGFDQ9GZP0 370 aaPredicted RBP34.24■■■■□ 3.07
HLA-C-204ENST00000415537 KNSTRNQ9Y448 316 aa34.24■■■■□ 3.07
HLA-C-204ENST00000415537 EYA1Q99502 592 aa34.22■■■■□ 3.07
HLA-C-204ENST00000415537 LRRC4BQ9NT99 713 aa34.22■■■■□ 3.07
HLA-C-204ENST00000415537 PAPPAQ13219 1627 aa34.22■■■■□ 3.07
HLA-C-204ENST00000415537 ZBTB7AO95365 584 aa34.21■■■■□ 3.07
HLA-C-204ENST00000415537 MORC1Q86VD1 984 aa34.21■■■■□ 3.07
HLA-C-204ENST00000415537 NCAPD2Q15021 1401 aa34.2■■■■□ 3.06
HLA-C-204ENST00000415537 PKD1L3Q7Z443 1732 aa34.19■■■■□ 3.06
HLA-C-204ENST00000415537 SPG7Q9UQ90 795 aa34.19■■■■□ 3.06
HLA-C-204ENST00000415537 KIF7Q2M1P5 1343 aa34.18■■■■□ 3.06
HLA-C-204ENST00000415537 CYP27B1O15528 508 aa34.17■■■■□ 3.06
HLA-C-204ENST00000415537 LY75O60449 1722 aa34.17■■■■□ 3.06
HLA-C-204ENST00000415537 EIF4A2Q14240 407 aaKnown RBP34.17■■■■□ 3.06
HLA-C-204ENST00000415537 ATF5Q9Y2D1 282 aaPredicted RBP34.16■■■■□ 3.06
HLA-C-204ENST00000415537 ZNF827Q17R98 1081 aa34.14■■■■□ 3.06
HLA-C-204ENST00000415537 KCNQ4P56696 695 aa34.12■■■■□ 3.05
HLA-C-204ENST00000415537 MTFR1LQ9H019 292 aa34.12■■■■□ 3.05
HLA-C-204ENST00000415537 CCNL1Q9UK58 526 aaPredicted RBP34.12■■■■□ 3.05
HLA-C-204ENST00000415537 MPRIPQ6WCQ1 1025 aa34.11■■■■□ 3.05
HLA-C-204ENST00000415537 AKT1S1Q96B36 256 aa34.11■■■■□ 3.05
HLA-C-204ENST00000415537 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.11■■■■□ 3.05
HLA-C-204ENST00000415537 ITGB4P16144 1822 aa34.09■■■■□ 3.05
HLA-C-204ENST00000415537 TFCP2L1Q9NZI6 479 aa34.08■■■■□ 3.05
HLA-C-204ENST00000415537 PTGER2P43116 358 aa34.07■■■■□ 3.04
HLA-C-204ENST00000415537 NKX1-1Q15270 411 aaPredicted RBP34.07■■■■□ 3.04
HLA-C-204ENST00000415537 QSER1Q2KHR3 1735 aa34.07■■■■□ 3.04
HLA-C-204ENST00000415537 TOGARAM1Q9Y4F4 1720 aa34.07■■■■□ 3.04
HLA-C-204ENST00000415537 IGSF1Q8N6C5 1336 aa34.05■■■■□ 3.04
HLA-C-204ENST00000415537 AMER1Q5JTC6 1135 aaPredicted RBP34.05■■■■□ 3.04
HLA-C-204ENST00000415537 IFNL2Q8IZJ0 200 aa34.05■■■■□ 3.04
HLA-C-204ENST00000415537 HMGB2P26583 209 aaKnown RBP34.04■■■■□ 3.04
HLA-C-204ENST00000415537 DCAF8L1A6NGE4 600 aa34.02■■■■□ 3.04
HLA-C-204ENST00000415537 SMARCC1Q92922 1105 aaPredicted RBP34.02■■■■□ 3.04
HLA-C-204ENST00000415537 PALLDQ8WX93 1383 aa34.01■■■■□ 3.04
HLA-C-204ENST00000415537 PLEKHG2Q9H7P9 1386 aa34.01■■■■□ 3.04
HLA-C-204ENST00000415537 PHKG2P15735 406 aa34.01■■■■□ 3.03
HLA-C-204ENST00000415537 TUBGCP6Q96RT7 1819 aa34.01■■■■□ 3.03
HLA-C-204ENST00000415537 SLC16A10Q8TF71 515 aa34■■■■□ 3.03
HLA-C-204ENST00000415537 PIGBQ92521 554 aa33.99■■■■□ 3.03
HLA-C-204ENST00000415537 PNPLA7Q6ZV29 1317 aa33.99■■■■□ 3.03
HLA-C-204ENST00000415537 C5P01031 1676 aa33.97■■■■□ 3.03
HLA-C-204ENST00000415537 PLEKHO1Q53GL0 409 aaPredicted RBP33.97■■■■□ 3.03
HLA-C-204ENST00000415537 SGIP1Q9BQI5 828 aa33.97■■■■□ 3.03
HLA-C-204ENST00000415537 TMOD3Q9NYL9 352 aa33.97■■■■□ 3.03
HLA-C-204ENST00000415537 PER1O15534 1290 aaPredicted RBP33.96■■■■□ 3.03
HLA-C-204ENST00000415537 CC2D1BQ5T0F9 858 aaKnown RBP33.95■■■■□ 3.03
HLA-C-204ENST00000415537 TAF1LQ8IZX4 1826 aa33.95■■■■□ 3.02
HLA-C-204ENST00000415537 ARXQ96QS3 562 aa33.94■■■■□ 3.02
HLA-C-204ENST00000415537 MSH5O43196 834 aa33.93■■■■□ 3.02
HLA-C-204ENST00000415537 AMOTQ4VCS5 1084 aa33.93■■■■□ 3.02
HLA-C-204ENST00000415537 HSP90AB1P08238 724 aaKnown RBP33.92■■■■□ 3.02
HLA-C-204ENST00000415537 FHDC1Q9C0D6 1143 aaPredicted RBP33.92■■■■□ 3.02
HLA-C-204ENST00000415537 POLD1P28340 1107 aa33.91■■■■□ 3.02
HLA-C-204ENST00000415537 MTHFSP49914 203 aa33.91■■■■□ 3.02
HLA-C-204ENST00000415537 SULT6B1Q6IMI4 303 aa33.91■■■■□ 3.02
HLA-C-204ENST00000415537 IL13P35225 146 aa33.9■■■■□ 3.02
HLA-C-204ENST00000415537 AEBP1Q8IUX7 1158 aa33.9■■■■□ 3.02
HLA-C-204ENST00000415537 ZNF530Q6P9A1 599 aaPredicted RBP33.89■■■■□ 3.02
HLA-C-204ENST00000415537 SYT17Q9BSW7 474 aa33.89■■■■□ 3.02
HLA-C-204ENST00000415537 DCAF5Q96JK2 942 aa33.87■■■■□ 3.01
HLA-C-204ENST00000415537 CNGB1Q14028 1251 aaPredicted RBP33.86■■■■□ 3.01
HLA-C-204ENST00000415537 C1orf141Q5JVX7 400 aa33.86■■■■□ 3.01
HLA-C-204ENST00000415537 COL23A1Q86Y22 540 aaPredicted RBP33.86■■■■□ 3.01
HLA-C-204ENST00000415537 ASAP1Q9ULH1 1129 aa33.86■■■■□ 3.01
HLA-C-204ENST00000415537 C4BP0C0L5 1744 aa33.85■■■■□ 3.01
HLA-C-204ENST00000415537 LOC102724428A0A0B4J2F2 783 aa33.85■■■■□ 3.01
HLA-C-204ENST00000415537 ERVV-2B6SEH9 535 aa33.85■■■■□ 3.01
HLA-C-204ENST00000415537 SIK1P57059 783 aa33.85■■■■□ 3.01
HLA-C-204ENST00000415537 FLAD1Q8NFF5 587 aa33.85■■■■□ 3.01
HLA-C-204ENST00000415537 AK7Q96M32 723 aa33.84■■■■□ 3.01
HLA-C-204ENST00000415537 COL24A1Q17RW2 1714 aa33.84■■■■□ 3.01
HLA-C-204ENST00000415537 KDRP35968 1356 aa33.84■■■■□ 3.01
HLA-C-204ENST00000415537 NPC1L1Q9UHC9 1359 aa33.83■■■■□ 3.01
HLA-C-204ENST00000415537 ATG3Q9NT62 314 aa33.81■■■■□ 3
HLA-C-204ENST00000415537 ATP6V1AP38606 617 aa33.8■■■■□ 3
HLA-C-204ENST00000415537 KLHL34Q8N239 644 aa33.8■■■■□ 3
HLA-C-204ENST00000415537 DIAPH1O60610 1272 aaKnown RBP33.79■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms