RNA–Protein interactions for RNA: ENST00000414887.1

SNX3P1X-201, Transcript of sorting nexin 3 pseudogene 1 X-linked, humanhuman

BASIC

Gene SNX3P1X, Length 175 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3P1X-201ENST00000414887 TMEM31Q5JXX7 168 aa0.16□□□□□ -2.38
SNX3P1X-201ENST00000414887 LHX8Q68G74 356 aa0.16□□□□□ -2.38
SNX3P1X-201ENST00000414887 LARP1Q6PKG0 1096 aaKnown RBP0.16□□□□□ -2.38
SNX3P1X-201ENST00000414887 TMC4Q7Z404 712 aa0.16□□□□□ -2.38
SNX3P1X-201ENST00000414887 LIN37Q96GY3 246 aaPredicted RBP0.16□□□□□ -2.38
SNX3P1X-201ENST00000414887 KCNH6Q9H252 994 aa0.16□□□□□ -2.38
SNX3P1X-201ENST00000414887 CLMPQ9H6B4 373 aa0.16□□□□□ -2.38
SNX3P1X-201ENST00000414887 NID2Q14112 1375 aa0.16□□□□□ -2.38
SNX3P1X-201ENST00000414887 SVILO95425 2214 aa0.15□□□□□ -2.38
SNX3P1X-201ENST00000414887 PCF11O94913 1555 aaKnown RBP0.15□□□□□ -2.38
SNX3P1X-201ENST00000414887 CHD4Q14839 1912 aa0.15□□□□□ -2.39
SNX3P1X-201ENST00000414887 RTEL1-TNFRSF6BF6WH68 1400 aa0.15□□□□□ -2.39
SNX3P1X-201ENST00000414887 SNED1Q8TER0 1413 aa0.15□□□□□ -2.39
SNX3P1X-201ENST00000414887 KCNK3O14649 394 aa0.15□□□□□ -2.39
SNX3P1X-201ENST00000414887 GPR37L1O60883 481 aa0.15□□□□□ -2.39
SNX3P1X-201ENST00000414887 AVPR2P30518 371 aa0.15□□□□□ -2.39
SNX3P1X-201ENST00000414887 RING1Q06587 406 aa0.15□□□□□ -2.39
SNX3P1X-201ENST00000414887 KRTAP1-1Q07627 177 aa0.15□□□□□ -2.39
SNX3P1X-201ENST00000414887 NFYCQ13952 458 aa0.15□□□□□ -2.39
SNX3P1X-201ENST00000414887 DCAF10Q5QP82 559 aa0.15□□□□□ -2.39
SNX3P1X-201ENST00000414887 LCE4AQ5TA78 99 aa0.15□□□□□ -2.39
SNX3P1X-201ENST00000414887 GRINAQ7Z429 371 aa0.15□□□□□ -2.39
SNX3P1X-201ENST00000414887 KRTAP19-1Q8IUB9 90 aa0.15□□□□□ -2.39
SNX3P1X-201ENST00000414887 PI4K2BQ8TCG2 481 aa0.15□□□□□ -2.39
SNX3P1X-201ENST00000414887 GPBP1L1Q9HC44 474 aaPredicted RBP0.15□□□□□ -2.39
SNX3P1X-201ENST00000414887 C11orf16Q9NQ32 467 aa0.15□□□□□ -2.39
SNX3P1X-201ENST00000414887 LHX6Q9UPM6 363 aa0.15□□□□□ -2.39
SNX3P1X-201ENST00000414887 RAI2Q9Y5P3 530 aa0.15□□□□□ -2.39
SNX3P1X-201ENST00000414887 DYNC1H1Q14204 4646 aaKnown RBP0.15□□□□□ -2.39
SNX3P1X-201ENST00000414887 ATRNL1Q5VV63 1379 aa0.15□□□□□ -2.39
SNX3P1X-201ENST00000414887 CDK12Q9NYV4 1490 aaPredicted RBP0.15□□□□□ -2.39
SNX3P1X-201ENST00000414887 CACNA1EQ15878 2313 aa0.14□□□□□ -2.39
SNX3P1X-201ENST00000414887 PTPRQQ9UMZ3 2332 aa0.14□□□□□ -2.39
SNX3P1X-201ENST00000414887 MEGF11A6BM72 1044 aa0.14□□□□□ -2.39
SNX3P1X-201ENST00000414887 GP1BBP13224 206 aa0.14□□□□□ -2.39
SNX3P1X-201ENST00000414887 GRNP28799 593 aaKnown RBP0.14□□□□□ -2.39
SNX3P1X-201ENST00000414887 WASP42768 502 aa0.14□□□□□ -2.39
SNX3P1X-201ENST00000414887 MT4P47944 62 aa0.14□□□□□ -2.39
SNX3P1X-201ENST00000414887 TMEM132AQ24JP5 1023 aa0.14□□□□□ -2.39
SNX3P1X-201ENST00000414887 TCTN1Q2MV58 587 aa0.14□□□□□ -2.39
SNX3P1X-201ENST00000414887 TJAP1Q5JTD0 557 aa0.14□□□□□ -2.39
SNX3P1X-201ENST00000414887 KRTAP5-11Q6L8G4 156 aa0.14□□□□□ -2.39
SNX3P1X-201ENST00000414887 GATAD1Q8WUU5 269 aa0.14□□□□□ -2.39
SNX3P1X-201ENST00000414887 CHAMP1Q96JM3 812 aa0.14□□□□□ -2.39
SNX3P1X-201ENST00000414887 ARMCX1Q9P291 453 aa0.14□□□□□ -2.39
SNX3P1X-201ENST00000414887 ADAMTS8Q9UP79 889 aa0.14□□□□□ -2.39
SNX3P1X-201ENST00000414887 WBP11Q9Y2W2 641 aaKnown RBP0.14□□□□□ -2.39
SNX3P1X-201ENST00000414887 PAXBP1Q9Y5B6 917 aa0.14□□□□□ -2.39
SNX3P1X-201ENST00000414887 MYO16Q9Y6X6 1858 aa0.14□□□□□ -2.39
SNX3P1X-201ENST00000414887 ADGRB3O60242 1522 aa0.13□□□□□ -2.39
SNX3P1X-201ENST00000414887 PRUNE2Q8WUY3 3088 aa0.13□□□□□ -2.39
SNX3P1X-201ENST00000414887 SOX1O00570 391 aaPredicted RBP0.13□□□□□ -2.39
SNX3P1X-201ENST00000414887 HRO43593 1189 aa0.13□□□□□ -2.39
SNX3P1X-201ENST00000414887 DIAPH2O60879 1101 aa0.13□□□□□ -2.39
SNX3P1X-201ENST00000414887 DSG3P32926 999 aa0.13□□□□□ -2.39
SNX3P1X-201ENST00000414887 HSPA2P54652 639 aa0.13□□□□□ -2.39
SNX3P1X-201ENST00000414887 DMWDQ09019 674 aa0.13□□□□□ -2.39
SNX3P1X-201ENST00000414887 TPRNQ4KMQ1 711 aa0.13□□□□□ -2.39
SNX3P1X-201ENST00000414887 C4orf17Q53FE4 359 aa0.13□□□□□ -2.39
SNX3P1X-201ENST00000414887 GPR153Q6NV75 609 aa0.13□□□□□ -2.39
SNX3P1X-201ENST00000414887 CCDC125Q86Z20 511 aa0.13□□□□□ -2.39
SNX3P1X-201ENST00000414887 SPIRE2Q8WWL2 714 aa0.13□□□□□ -2.39
SNX3P1X-201ENST00000414887 PPP1R10Q96QC0 940 aaKnown RBP0.13□□□□□ -2.39
SNX3P1X-201ENST00000414887 KRTAP9-8Q9BYQ0 159 aa0.13□□□□□ -2.39
SNX3P1X-201ENST00000414887 MCOLN1Q9GZU1 580 aa0.13□□□□□ -2.39
SNX3P1X-201ENST00000414887 IRF2BPLQ9H1B7 796 aa0.13□□□□□ -2.39
SNX3P1X-201ENST00000414887 DHX36Q9H2U1 1008 aaKnown RBP0.13□□□□□ -2.39
SNX3P1X-201ENST00000414887 PLA2G2EQ9NZK7 142 aa0.13□□□□□ -2.39
SNX3P1X-201ENST00000414887 ZZEF1O43149 2961 aa0.13□□□□□ -2.39
SNX3P1X-201ENST00000414887 TRIOO75962 3097 aa0.13□□□□□ -2.39
SNX3P1X-201ENST00000414887 FRAS1Q86XX4 4008 aa0.13□□□□□ -2.39
SNX3P1X-201ENST00000414887 HSPG2P98160 4391 aa0.13□□□□□ -2.39
SNX3P1X-201ENST00000414887 ATP10DQ9P241 1426 aa0.13□□□□□ -2.39
SNX3P1X-201ENST00000414887 HECTD4Q9Y4D8 3996 aa0.13□□□□□ -2.39
SNX3P1X-201ENST00000414887 SHANK2Q9UPX8 1470 aa0.12□□□□□ -2.39
SNX3P1X-201ENST00000414887 CACNA1IQ9P0X4 2223 aa0.12□□□□□ -2.39
SNX3P1X-201ENST00000414887 SRRM3A6NNA2 597 aaPredicted RBP0.12□□□□□ -2.39
SNX3P1X-201ENST00000414887 J3QKU1 62 aa0.12□□□□□ -2.39
SNX3P1X-201ENST00000414887 SMIM22K7EJ46 135 aa0.12□□□□□ -2.39
SNX3P1X-201ENST00000414887 RGL2O15211 777 aa0.12□□□□□ -2.39
SNX3P1X-201ENST00000414887 CAMTA2O94983 1202 aa0.12□□□□□ -2.39
SNX3P1X-201ENST00000414887 HSPA8P11142 646 aaKnown RBP0.12□□□□□ -2.39
SNX3P1X-201ENST00000414887 VCPP55072 806 aaKnown RBP0.12□□□□□ -2.39
SNX3P1X-201ENST00000414887 ZXDBP98169 803 aa0.12□□□□□ -2.39
SNX3P1X-201ENST00000414887 RUNX1T1Q06455 604 aa0.12□□□□□ -2.39
SNX3P1X-201ENST00000414887 C19orf57Q0VDD7 668 aa0.12□□□□□ -2.39
SNX3P1X-201ENST00000414887 COL19A1Q14993 1142 aa0.12□□□□□ -2.39
SNX3P1X-201ENST00000414887 COLEC12Q5KU26 742 aa0.12□□□□□ -2.39
SNX3P1X-201ENST00000414887 DEFB123Q8N688 67 aa0.12□□□□□ -2.39
SNX3P1X-201ENST00000414887 CNKSR2Q8WXI2 1034 aa0.12□□□□□ -2.39
SNX3P1X-201ENST00000414887 RMDN1Q96DB5 314 aa0.12□□□□□ -2.39
SNX3P1X-201ENST00000414887 LRCH3Q96II8 777 aa0.12□□□□□ -2.39
SNX3P1X-201ENST00000414887 BBC3Q96PG8 261 aaPredicted RBP0.12□□□□□ -2.39
SNX3P1X-201ENST00000414887 IGFLR1Q9H665 355 aa0.12□□□□□ -2.39
SNX3P1X-201ENST00000414887 EPHX3Q9H6B9 360 aa0.12□□□□□ -2.39
SNX3P1X-201ENST00000414887 RRAGCQ9HB90 399 aa0.12□□□□□ -2.39
SNX3P1X-201ENST00000414887 POGZQ7Z3K3 1410 aa0.12□□□□□ -2.39
SNX3P1X-201ENST00000414887 ARAP1Q96P48 1450 aa0.11□□□□□ -2.39
SNX3P1X-201ENST00000414887 ATMQ13315 3056 aa0.11□□□□□ -2.39
SNX3P1X-201ENST00000414887 PRRC2AP48634 2157 aaKnown RBP0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms