RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 GUCY1B3Q02153 619 aa21.7■■□□□ 1.06
SHANK3-202ENST00000414786 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.7■■□□□ 1.061e-6■■■□□ 17.8
SHANK3-202ENST00000414786 IGHMBP2P38935 993 aaKnown RBP21.7■■□□□ 1.06
SHANK3-202ENST00000414786 SMG6Q86US8 1419 aaKnown RBP21.7■■□□□ 1.06
SHANK3-202ENST00000414786 GOLGA6L7A0A1B0GV03 622 aa21.7■■□□□ 1.06
SHANK3-202ENST00000414786 TAF4BQ92750 862 aa21.7■■□□□ 1.06
SHANK3-202ENST00000414786 DDX23Q9BUQ8 820 aaKnown RBP21.7■■□□□ 1.06
SHANK3-202ENST00000414786 CTNNA2P26232 953 aa21.7■■□□□ 1.06
SHANK3-202ENST00000414786 IL1RAPL2Q9NP60 686 aa21.7■■□□□ 1.06
SHANK3-202ENST00000414786 NOB1Q9ULX3 412 aaKnown RBP21.7■■□□□ 1.06
SHANK3-202ENST00000414786 CCDC91Q7Z6B0 441 aa21.69■■□□□ 1.06
SHANK3-202ENST00000414786 SULT6B1Q6IMI4 303 aa21.69■■□□□ 1.06
SHANK3-202ENST00000414786 UACAQ9BZF9 1416 aa21.69■■□□□ 1.06
SHANK3-202ENST00000414786 KIF20AO95235 890 aa21.69■■□□□ 1.06
SHANK3-202ENST00000414786 ZBTB9Q96C00 473 aa21.69■■□□□ 1.06
SHANK3-202ENST00000414786 LRRCC1Q9C099 1032 aa21.69■■□□□ 1.06
SHANK3-202ENST00000414786 CYP46A1Q9Y6A2 500 aa21.68■■□□□ 1.06
SHANK3-202ENST00000414786 SAMM50Q9Y512 469 aa21.68■■□□□ 1.06
SHANK3-202ENST00000414786 SRRTQ9BXP5 876 aaKnown RBP21.68■■□□□ 1.06
SHANK3-202ENST00000414786 DPH6Q7L8W6 267 aa21.68■■□□□ 1.06
SHANK3-202ENST00000414786 GNAI2P04899 355 aa21.68■■□□□ 1.06
SHANK3-202ENST00000414786 ZNF622Q969S3 477 aaKnown RBP eCLIP21.68■■□□□ 1.06
SHANK3-202ENST00000414786 PABPN1LA6NDY0 278 aaKnown RBP21.67■■□□□ 1.06
SHANK3-202ENST00000414786 BTBD11A6QL63 1104 aa21.67■■□□□ 1.06
SHANK3-202ENST00000414786 FILIP1Q7Z7B0 1213 aa21.67■■□□□ 1.06
SHANK3-202ENST00000414786 FMN1Q68DA7 1419 aa21.67■■□□□ 1.06
SHANK3-202ENST00000414786 EPB41L2O43491 1005 aaKnown RBP21.67■■□□□ 1.06
SHANK3-202ENST00000414786 PPFIA3O75145 1194 aa21.67■■□□□ 1.06
SHANK3-202ENST00000414786 FEZ1Q99689 392 aa21.67■■□□□ 1.06
SHANK3-202ENST00000414786 APBB1IPQ7Z5R6 666 aaPredicted RBP21.66■■□□□ 1.06
SHANK3-202ENST00000414786 METTL24Q5JXM2 366 aa21.66■■□□□ 1.06
SHANK3-202ENST00000414786 AIDAQ96BJ3 306 aa21.66■■□□□ 1.06
SHANK3-202ENST00000414786 LARP1BQ659C4 914 aaKnown RBP21.66■■□□□ 1.06
SHANK3-202ENST00000414786 LARP1Q6PKG0 1096 aaKnown RBP21.66■■□□□ 1.06
SHANK3-202ENST00000414786 CCDC144CPQ8IYA2 1237 aa21.66■■□□□ 1.06
SHANK3-202ENST00000414786 PIP4K2AP48426 406 aaPredicted RBP21.65■■□□□ 1.06
SHANK3-202ENST00000414786 DZIP1Q86YF9 867 aaKnown RBP21.65■■□□□ 1.06
SHANK3-202ENST00000414786 EXOSC9Q06265 439 aaKnown RBP21.65■■□□□ 1.06
SHANK3-202ENST00000414786 MPRIPQ6WCQ1 1025 aa21.65■■□□□ 1.06
SHANK3-202ENST00000414786 TWISTNBQ3B726 338 aaPredicted RBP21.65■■□□□ 1.06
SHANK3-202ENST00000414786 USP47Q96K76 1375 aa21.65■■□□□ 1.06
SHANK3-202ENST00000414786 STAMBPO95630 424 aa21.65■■□□□ 1.06
SHANK3-202ENST00000414786 RANBP6O60518 1105 aaKnown RBP21.64■■□□□ 1.06
SHANK3-202ENST00000414786 RRS1Q15050 365 aaKnown RBP21.64■■□□□ 1.06
SHANK3-202ENST00000414786 NUTM1Q86Y26 1132 aa21.64■■□□□ 1.05
SHANK3-202ENST00000414786 LMAN1P49257 510 aa21.64■■□□□ 1.05
SHANK3-202ENST00000414786 JAKMIP1Q96N16 626 aaKnown RBP21.64■■□□□ 1.05
SHANK3-202ENST00000414786 SPG7Q9UQ90 795 aa21.64■■□□□ 1.05
SHANK3-202ENST00000414786 JMYQ8N9B5 988 aa21.63■■□□□ 1.05
SHANK3-202ENST00000414786 INCENPQ9NQS7 918 aa21.63■■□□□ 1.05
SHANK3-202ENST00000414786 GAS2L2Q8NHY3 880 aa21.63■■□□□ 1.05
SHANK3-202ENST00000414786 C6orf229H3BNL8 230 aa21.63■■□□□ 1.05
SHANK3-202ENST00000414786 GNAI3P08754 354 aa21.63■■□□□ 1.05
SHANK3-202ENST00000414786 C16orf71Q8IYS4 520 aaPredicted RBP21.63■■□□□ 1.05
SHANK3-202ENST00000414786 OTUD6BQ8N6M0 293 aa21.63■■□□□ 1.05
SHANK3-202ENST00000414786 CCDC150Q8NCX0 1101 aa21.63■■□□□ 1.05
SHANK3-202ENST00000414786 SLC26A8Q96RN1 970 aa21.63■■□□□ 1.05
SHANK3-202ENST00000414786 DACH1Q9UI36 760 aa21.63■■□□□ 1.05
SHANK3-202ENST00000414786 OSCARQ8IYS5 282 aa21.63■■□□□ 1.05
SHANK3-202ENST00000414786 RGS22Q8NE09 1264 aa21.63■■□□□ 1.05
SHANK3-202ENST00000414786 RPGRQ92834 1020 aaKnown RBP21.63■■□□□ 1.05
SHANK3-202ENST00000414786 CPLX3Q8WVH0 158 aa21.62■■□□□ 1.05
SHANK3-202ENST00000414786 TRAK2O60296 914 aa21.62■■□□□ 1.05
SHANK3-202ENST00000414786 PRPF4BQ13523 1007 aaKnown RBP21.62■■□□□ 1.05
SHANK3-202ENST00000414786 PRAM1Q96QH2 718 aa21.62■■□□□ 1.05
SHANK3-202ENST00000414786 LARP6Q9BRS8 491 aaKnown RBP21.62■■□□□ 1.05
SHANK3-202ENST00000414786 DHX57Q6P158 1386 aaKnown RBP21.62■■□□□ 1.05
SHANK3-202ENST00000414786 ZFP91Q96JP5 570 aaPredicted RBP21.62■■□□□ 1.05
SHANK3-202ENST00000414786 CACNA2D4Q7Z3S7 1137 aa21.61■■□□□ 1.05
SHANK3-202ENST00000414786 HIP1O00291 1037 aa21.61■■□□□ 1.05
SHANK3-202ENST00000414786 RABEP1Q15276 862 aa21.61■■□□□ 1.05
SHANK3-202ENST00000414786 USHBP1Q8N6Y0 703 aa21.61■■□□□ 1.05
SHANK3-202ENST00000414786 F8W031 263 aaPredicted RBP21.6■■□□□ 1.05
SHANK3-202ENST00000414786 ATP2B3Q16720 1220 aa21.6■■□□□ 1.05
SHANK3-202ENST00000414786 SPATA32Q96LK8 384 aa21.59■■□□□ 1.05
SHANK3-202ENST00000414786 ABCC8Q09428 1581 aa21.59■■□□□ 1.05
SHANK3-202ENST00000414786 RAB11FIP4Q86YS3 637 aa21.59■■□□□ 1.05
SHANK3-202ENST00000414786 SSX2IPQ9Y2D8 614 aa21.59■■□□□ 1.05
SHANK3-202ENST00000414786 ATXN8OSP0DMR3 200 aa21.59■■□□□ 1.05
SHANK3-202ENST00000414786 BIN2Q9UBW5 565 aaPredicted RBP21.59■■□□□ 1.05
SHANK3-202ENST00000414786 GIMAP7Q8NHV1 300 aa21.59■■□□□ 1.05
SHANK3-202ENST00000414786 CUL5Q93034 780 aa21.59■■□□□ 1.05
SHANK3-202ENST00000414786 PPP1R12BO60237 982 aaPredicted RBP21.59■■□□□ 1.05
SHANK3-202ENST00000414786 CCP110O43303 1012 aa21.59■■□□□ 1.05
SHANK3-202ENST00000414786 SRGAP3O43295 1099 aa21.58■■□□□ 1.05
SHANK3-202ENST00000414786 CEP126Q9P2H0 1117 aa21.58■■□□□ 1.05
SHANK3-202ENST00000414786 IFFO1Q0D2I5 559 aa21.58■■□□□ 1.05
SHANK3-202ENST00000414786 HOOK3Q86VS8 718 aa21.58■■□□□ 1.05
SHANK3-202ENST00000414786 BICD1Q96G01 975 aa21.58■■□□□ 1.05
SHANK3-202ENST00000414786 DNAI2Q9GZS0 605 aa21.58■■□□□ 1.05
SHANK3-202ENST00000414786 RBM26Q5T8P6 1007 aaKnown RBP21.58■■□□□ 1.05
SHANK3-202ENST00000414786 PRDM2Q13029 1718 aa21.58■■□□□ 1.05
SHANK3-202ENST00000414786 CFAP100Q494V2 611 aa21.58■■□□□ 1.05
SHANK3-202ENST00000414786 GPTP24298 496 aa21.58■■□□□ 1.04
SHANK3-202ENST00000414786 CKAP2LQ8IYA6 745 aa21.58■■□□□ 1.04
SHANK3-202ENST00000414786 PDRG1Q9NUG6 133 aa21.58■■□□□ 1.04
SHANK3-202ENST00000414786 TCERG1LQ5VWI1 586 aa21.58■■□□□ 1.04
SHANK3-202ENST00000414786 ZSCAN25Q6NSZ9 544 aa21.58■■□□□ 1.04
SHANK3-202ENST00000414786 PLS1Q14651 629 aa21.57■■□□□ 1.04
SHANK3-202ENST00000414786 CETN2P41208 172 aa21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms