RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 FAM117AQ9C073 453 aa5.42□□□□□ -1.54
SF3B1-203ENST00000414174 KDM4CQ9H3R0 1056 aa5.42□□□□□ -1.54
SF3B1-203ENST00000414174 ZBTB3Q9H5J0 574 aa5.42□□□□□ -1.54
SF3B1-203ENST00000414174 MBIPQ9NS73 344 aa5.42□□□□□ -1.54
SF3B1-203ENST00000414174 CTSOP43234 321 aaPredicted RBP5.41□□□□□ -1.54
SF3B1-203ENST00000414174 CLK2P49760 499 aaKnown RBP5.41□□□□□ -1.54
SF3B1-203ENST00000414174 SH3BP5LQ7L8J4 393 aa5.41□□□□□ -1.54
SF3B1-203ENST00000414174 KRBA1A5PL33 1030 aa5.4□□□□□ -1.54
SF3B1-203ENST00000414174 FURINP09958 794 aa5.4□□□□□ -1.54
SF3B1-203ENST00000414174 PKNOX2Q96KN3 472 aa5.4□□□□□ -1.54
SF3B1-203ENST00000414174 POLR3EQ9NVU0 708 aa5.4□□□□□ -1.54
SF3B1-203ENST00000414174 BCCIPQ9P287 314 aaKnown RBP eCLIP5.4□□□□□ -1.54
SF3B1-203ENST00000414174 DHX9Q08211 1270 aaKnown RBP5.39□□□□□ -1.55
SF3B1-203ENST00000414174 LCE3BQ5TA77 95 aa5.39□□□□□ -1.55
SF3B1-203ENST00000414174 NBPF14Q5TI25 921 aa5.39□□□□□ -1.55
SF3B1-203ENST00000414174 FOXR1Q6PIV2 292 aa5.39□□□□□ -1.55
SF3B1-203ENST00000414174 PROCA1Q8NCQ7 364 aaPredicted RBP5.39□□□□□ -1.55
SF3B1-203ENST00000414174 RNF217Q8TC41 542 aa5.39□□□□□ -1.55
SF3B1-203ENST00000414174 INSM2Q96T92 566 aaPredicted RBP5.39□□□□□ -1.55
SF3B1-203ENST00000414174 KRTAP4-12Q9BQ66 201 aa5.39□□□□□ -1.55
SF3B1-203ENST00000414174 CUEDC1Q9NWM3 386 aaPredicted RBP5.39□□□□□ -1.55
SF3B1-203ENST00000414174 IGF1RP08069 1367 aa5.39□□□□□ -1.55
SF3B1-203ENST00000414174 SH3D19Q5HYK7 790 aa5.38□□□□□ -1.55
SF3B1-203ENST00000414174 ACDQ96AP0 544 aa5.38□□□□□ -1.55
SF3B1-203ENST00000414174 ZBTB7CA1YPR0 619 aa5.37□□□□□ -1.55
SF3B1-203ENST00000414174 TRIM22Q8IYM9 498 aa5.37□□□□□ -1.55
SF3B1-203ENST00000414174 GPKOWQ92917 476 aaPredicted RBP eCLIP5.37□□□□□ -1.553e-8■■■□□ 18.6
SF3B1-203ENST00000414174 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.37□□□□□ -1.55
SF3B1-203ENST00000414174 POLMQ9NP87 494 aaPredicted RBP5.37□□□□□ -1.55
SF3B1-203ENST00000414174 CDV3Q9UKY7 258 aaKnown RBP5.37□□□□□ -1.55
SF3B1-203ENST00000414174 FGD1P98174 961 aa5.36□□□□□ -1.55
SF3B1-203ENST00000414174 AGBL1Q96MI9 1066 aa5.36□□□□□ -1.55
SF3B1-203ENST00000414174 NUTM2BA6NNL0 878 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-203ENST00000414174 NUTM2EB1AL46 878 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-203ENST00000414174 OIP5O43482 229 aa5.35□□□□□ -1.55
SF3B1-203ENST00000414174 RELBQ01201 579 aa5.35□□□□□ -1.55
SF3B1-203ENST00000414174 CTDSPL2Q05D32 466 aa5.35□□□□□ -1.55
SF3B1-203ENST00000414174 SKIV2LQ15477 1246 aaKnown RBP5.35□□□□□ -1.55
SF3B1-203ENST00000414174 NUTM2DQ5VT03 806 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-203ENST00000414174 LYSMD3Q7Z3D4 306 aa5.35□□□□□ -1.55
SF3B1-203ENST00000414174 NUTM2AQ8IVF1 878 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-203ENST00000414174 TSC1Q92574 1164 aa5.35□□□□□ -1.55
SF3B1-203ENST00000414174 KCTD15Q96SI1 283 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-203ENST00000414174 MAGEB6P1A0A0J9YX57 407 aa5.34□□□□□ -1.55
SF3B1-203ENST00000414174 ERFEQ4G0M1 354 aa5.34□□□□□ -1.55
SF3B1-203ENST00000414174 ZNF326Q5BKZ1 582 aaKnown RBP5.34□□□□□ -1.55
SF3B1-203ENST00000414174 PPP2R2DQ66LE6 453 aa5.34□□□□□ -1.55
SF3B1-203ENST00000414174 LRRN4Q8WUT4 740 aa5.34□□□□□ -1.55
SF3B1-203ENST00000414174 ZNF837Q96EG3 531 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-203ENST00000414174 RSPH6AQ9H0K4 717 aa5.34□□□□□ -1.55
SF3B1-203ENST00000414174 ZNF395Q9H8N7 513 aaPredicted RBP5.34□□□□□ -1.55
SF3B1-203ENST00000414174 MKL2Q9ULH7 1088 aa5.34□□□□□ -1.55
SF3B1-203ENST00000414174 NSFL1CQ9UNZ2 370 aaKnown RBP5.34□□□□□ -1.55
SF3B1-203ENST00000414174 SNRPNP63162 240 aaKnown RBP5.33□□□□□ -1.56
SF3B1-203ENST00000414174 DBN1Q16643 649 aa5.33□□□□□ -1.56
SF3B1-203ENST00000414174 FOXD4L5Q5VV16 416 aaPredicted RBP5.33□□□□□ -1.56
SF3B1-203ENST00000414174 DDRGK1Q96HY6 314 aa5.33□□□□□ -1.56
SF3B1-203ENST00000414174 KRTAP9-9Q9BYP9 154 aa5.33□□□□□ -1.56
SF3B1-203ENST00000414174 KRTAP9-4Q9BYQ2 154 aa5.33□□□□□ -1.56
SF3B1-203ENST00000414174 BTBD11A6QL63 1104 aa5.32□□□□□ -1.56
SF3B1-203ENST00000414174 H7C1W4 665 aa5.32□□□□□ -1.56
SF3B1-203ENST00000414174 COL8A1P27658 744 aa5.32□□□□□ -1.56
SF3B1-203ENST00000414174 HELBQ8NG08 1087 aaPredicted RBP5.32□□□□□ -1.56
SF3B1-203ENST00000414174 ITGB7P26010 798 aa5.31□□□□□ -1.56
SF3B1-203ENST00000414174 PTGIRP43119 386 aa5.31□□□□□ -1.56
SF3B1-203ENST00000414174 RNF144AP50876 292 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-203ENST00000414174 BRPF1P55201 1214 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-203ENST00000414174 PDXDC2PQ6P474 469 aa5.31□□□□□ -1.56
SF3B1-203ENST00000414174 EPS8L1Q8TE68 723 aa5.31□□□□□ -1.56
SF3B1-203ENST00000414174 TRERF1Q96PN7 1200 aa5.31□□□□□ -1.56
SF3B1-203ENST00000414174 OCSTAMPQ9BR26 566 aa5.31□□□□□ -1.56
SF3B1-203ENST00000414174 HMX1Q9NP08 348 aaPredicted RBP5.31□□□□□ -1.56
SF3B1-203ENST00000414174 GPR25O00155 361 aa5.3□□□□□ -1.56
SF3B1-203ENST00000414174 ADH1AP07327 375 aa5.3□□□□□ -1.56
SF3B1-203ENST00000414174 MX2P20592 715 aa5.3□□□□□ -1.56
SF3B1-203ENST00000414174 MAP2K3P46734 347 aa5.3□□□□□ -1.56
SF3B1-203ENST00000414174 INTS6LQ5JSJ4 861 aaKnown RBP5.3□□□□□ -1.56
SF3B1-203ENST00000414174 KDF1Q8NAX2 398 aaPredicted RBP5.3□□□□□ -1.56
SF3B1-203ENST00000414174 CARD14Q9BXL6 1004 aa5.3□□□□□ -1.56
SF3B1-203ENST00000414174 NR6A1Q15406 480 aa5.29□□□□□ -1.56
SF3B1-203ENST00000414174 GTPBP3Q969Y2 492 aaKnown RBP5.29□□□□□ -1.56
SF3B1-203ENST00000414174 SLC10A4Q96EP9 437 aa5.29□□□□□ -1.56
SF3B1-203ENST00000414174 OXCT2Q9BYC2 517 aaPredicted RBP5.29□□□□□ -1.56
SF3B1-203ENST00000414174 DYRK1BQ9Y463 629 aa5.29□□□□□ -1.56
SF3B1-203ENST00000414174 C1QTNF9BB2RNN3 333 aa5.28□□□□□ -1.56
SF3B1-203ENST00000414174 PIK3R2O00459 728 aa5.28□□□□□ -1.56
SF3B1-203ENST00000414174 ADD1P35611 737 aaKnown RBP5.28□□□□□ -1.56
SF3B1-203ENST00000414174 RFC5P40937 340 aa5.28□□□□□ -1.56
SF3B1-203ENST00000414174 NEUROD2Q15784 382 aa5.28□□□□□ -1.56
SF3B1-203ENST00000414174 ZMYM1Q5SVZ6 1142 aa5.28□□□□□ -1.56
SF3B1-203ENST00000414174 LINC00114Q6XXX2 140 aa5.28□□□□□ -1.56
SF3B1-203ENST00000414174 PRICKLE2Q7Z3G6 844 aa5.28□□□□□ -1.56
SF3B1-203ENST00000414174 ARID3AQ99856 593 aa5.28□□□□□ -1.56
SF3B1-203ENST00000414174 ARHGAP9Q9BRR9 750 aa5.28□□□□□ -1.56
SF3B1-203ENST00000414174 POLR3GLQ9BT43 218 aa5.28□□□□□ -1.56
SF3B1-203ENST00000414174 KRTAP4-8A0A0G2JLE6 195 aa5.27□□□□□ -1.57
SF3B1-203ENST00000414174 LILRA1O75019 489 aa5.27□□□□□ -1.57
SF3B1-203ENST00000414174 AP1G2O75843 785 aa5.27□□□□□ -1.57
SF3B1-203ENST00000414174 CENPBP07199 599 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-203ENST00000414174 USP17L8P0C7I0 530 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms