RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 SPON1Q9HCB6 807 aa23.19■■□□□ 1.3
COL6A2-205ENST00000413758 PPP1R1BQ9UD71 204 aaPredicted RBP23.19■■□□□ 1.3
COL6A2-205ENST00000413758 EMILIN1Q9Y6C2 1016 aa23.19■■□□□ 1.3
COL6A2-205ENST00000413758 TATP17735 454 aaPredicted RBP23.18■■□□□ 1.3
COL6A2-205ENST00000413758 MEGF6O75095 1541 aa23.17■■□□□ 1.3
COL6A2-205ENST00000413758 KIF24Q5T7B8 1368 aa23.16■■□□□ 1.3
COL6A2-205ENST00000413758 BTAF1O14981 1849 aa23.16■■□□□ 1.3
COL6A2-205ENST00000413758 TNNT2P45379 298 aaPredicted RBP23.15■■□□□ 1.3
COL6A2-205ENST00000413758 PRIM1P49642 420 aaKnown RBP23.14■■□□□ 1.29
COL6A2-205ENST00000413758 SLC15A2Q16348 729 aa23.14■■□□□ 1.29
COL6A2-205ENST00000413758 PANK3Q9H999 370 aa23.13■■□□□ 1.29
COL6A2-205ENST00000413758 ZBTB7AO95365 584 aa23.11■■□□□ 1.29
COL6A2-205ENST00000413758 PDGFDQ9GZP0 370 aaPredicted RBP23.1■■□□□ 1.29
COL6A2-205ENST00000413758 DOT1LQ8TEK3 1739 aa23.09■■□□□ 1.29
COL6A2-205ENST00000413758 PCDH11XQ9BZA7 1347 aa23.08■■□□□ 1.29
COL6A2-205ENST00000413758 PCDH11YQ9BZA8 1340 aa23.08■■□□□ 1.29
COL6A2-205ENST00000413758 MAP2P11137 1827 aaKnown RBP23.08■■□□□ 1.29
COL6A2-205ENST00000413758 ATF5Q9Y2D1 282 aaPredicted RBP23.08■■□□□ 1.29
COL6A2-205ENST00000413758 SHANK3Q9BYB0 1731 aa23.08■■□□□ 1.28
COL6A2-205ENST00000413758 WASHC2AQ641Q2 1341 aa23.08■■□□□ 1.28
COL6A2-205ENST00000413758 POLKQ9UBT6 870 aa23.07■■□□□ 1.28
COL6A2-205ENST00000413758 CASZ1Q86V15 1759 aa23.06■■□□□ 1.28
COL6A2-205ENST00000413758 LRRC4BQ9NT99 713 aa23.06■■□□□ 1.28
COL6A2-205ENST00000413758 SLC27A3Q5K4L6 730 aa23.05■■□□□ 1.28
COL6A2-205ENST00000413758 ANKRD26Q9UPS8 1709 aa23.05■■□□□ 1.28
COL6A2-205ENST00000413758 KCNQ4P56696 695 aa23.04■■□□□ 1.28
COL6A2-205ENST00000413758 ZNF827Q17R98 1081 aa23.03■■□□□ 1.28
COL6A2-205ENST00000413758 MORC1Q86VD1 984 aa23.03■■□□□ 1.28
COL6A2-205ENST00000413758 EYA1Q99502 592 aa23.03■■□□□ 1.28
COL6A2-205ENST00000413758 KNSTRNQ9Y448 316 aa23.03■■□□□ 1.28
COL6A2-205ENST00000413758 SPG7Q9UQ90 795 aa23.02■■□□□ 1.28
COL6A2-205ENST00000413758 NSD2O96028 1365 aa23.01■■□□□ 1.27
COL6A2-205ENST00000413758 DCAF8L1A6NGE4 600 aa23.01■■□□□ 1.27
COL6A2-205ENST00000413758 MTFR1LQ9H019 292 aa23.01■■□□□ 1.27
COL6A2-205ENST00000413758 CCNL1Q9UK58 526 aaPredicted RBP23.01■■□□□ 1.27
COL6A2-205ENST00000413758 CYP27B1O15528 508 aa23■■□□□ 1.27
COL6A2-205ENST00000413758 MPRIPQ6WCQ1 1025 aa23■■□□□ 1.27
COL6A2-205ENST00000413758 PAPPAQ13219 1627 aa23■■□□□ 1.27
COL6A2-205ENST00000413758 EIF4A2Q14240 407 aaKnown RBP22.99■■□□□ 1.27
COL6A2-205ENST00000413758 TFCP2L1Q9NZI6 479 aa22.99■■□□□ 1.27
COL6A2-205ENST00000413758 PTGER2P43116 358 aa22.97■■□□□ 1.27
COL6A2-205ENST00000413758 AKT1S1Q96B36 256 aa22.97■■□□□ 1.27
COL6A2-205ENST00000413758 KIF7Q2M1P5 1343 aa22.97■■□□□ 1.27
COL6A2-205ENST00000413758 NCAPD2Q15021 1401 aa22.95■■□□□ 1.26
COL6A2-205ENST00000413758 PKD1L3Q7Z443 1732 aa22.95■■□□□ 1.26
COL6A2-205ENST00000413758 LY75O60449 1722 aa22.94■■□□□ 1.26
COL6A2-205ENST00000413758 MSH5O43196 834 aa22.94■■□□□ 1.26
COL6A2-205ENST00000413758 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.93■■□□□ 1.26
COL6A2-205ENST00000413758 PALLDQ8WX93 1383 aa22.92■■□□□ 1.26
COL6A2-205ENST00000413758 IFNL2Q8IZJ0 200 aa22.92■■□□□ 1.26
COL6A2-205ENST00000413758 SMARCC1Q92922 1105 aaPredicted RBP22.92■■□□□ 1.26
COL6A2-205ENST00000413758 PNPLA7Q6ZV29 1317 aa22.91■■□□□ 1.26
COL6A2-205ENST00000413758 NKX1-1Q15270 411 aaPredicted RBP22.9■■□□□ 1.26
COL6A2-205ENST00000413758 SLC16A10Q8TF71 515 aa22.9■■□□□ 1.26
COL6A2-205ENST00000413758 ARXQ96QS3 562 aa22.9■■□□□ 1.26
COL6A2-205ENST00000413758 FHDC1Q9C0D6 1143 aaPredicted RBP22.9■■□□□ 1.26
COL6A2-205ENST00000413758 IGSF1Q8N6C5 1336 aa22.89■■□□□ 1.26
COL6A2-205ENST00000413758 PHKG2P15735 406 aa22.89■■□□□ 1.25
COL6A2-205ENST00000413758 POLD1P28340 1107 aa22.89■■□□□ 1.25
COL6A2-205ENST00000413758 PIGBQ92521 554 aa22.89■■□□□ 1.25
COL6A2-205ENST00000413758 TMOD3Q9NYL9 352 aa22.89■■□□□ 1.25
COL6A2-205ENST00000413758 ITGB4P16144 1822 aa22.89■■□□□ 1.25
COL6A2-205ENST00000413758 TOGARAM1Q9Y4F4 1720 aa22.88■■□□□ 1.25
COL6A2-205ENST00000413758 HMGB2P26583 209 aaKnown RBP22.88■■□□□ 1.25
COL6A2-205ENST00000413758 KLHL34Q8N239 644 aa22.88■■□□□ 1.25
COL6A2-205ENST00000413758 CNGB1Q14028 1251 aaPredicted RBP22.87■■□□□ 1.25
COL6A2-205ENST00000413758 PLEKHO1Q53GL0 409 aaPredicted RBP22.87■■□□□ 1.25
COL6A2-205ENST00000413758 AMER1Q5JTC6 1135 aaPredicted RBP22.87■■□□□ 1.25
COL6A2-205ENST00000413758 SGIP1Q9BQI5 828 aa22.87■■□□□ 1.25
COL6A2-205ENST00000413758 QSER1Q2KHR3 1735 aa22.87■■□□□ 1.25
COL6A2-205ENST00000413758 SYT17Q9BSW7 474 aa22.86■■□□□ 1.25
COL6A2-205ENST00000413758 TUBGCP6Q96RT7 1819 aa22.86■■□□□ 1.25
COL6A2-205ENST00000413758 CC2D1BQ5T0F9 858 aaKnown RBP22.85■■□□□ 1.25
COL6A2-205ENST00000413758 ZNF530Q6P9A1 599 aaPredicted RBP22.84■■□□□ 1.25
COL6A2-205ENST00000413758 C5P01031 1676 aa22.84■■□□□ 1.25
COL6A2-205ENST00000413758 SULT6B1Q6IMI4 303 aa22.83■■□□□ 1.25
COL6A2-205ENST00000413758 AEBP1Q8IUX7 1158 aa22.83■■□□□ 1.25
COL6A2-205ENST00000413758 AK7Q96M32 723 aa22.83■■□□□ 1.25
COL6A2-205ENST00000413758 HSP90AB1P08238 724 aaKnown RBP22.82■■□□□ 1.24
COL6A2-205ENST00000413758 YY1P25490 414 aa22.82■■□□□ 1.24
COL6A2-205ENST00000413758 AMOTQ4VCS5 1084 aa22.82■■□□□ 1.24
COL6A2-205ENST00000413758 COL23A1Q86Y22 540 aaPredicted RBP22.82■■□□□ 1.24
COL6A2-205ENST00000413758 PLEKHG2Q9H7P9 1386 aa22.81■■□□□ 1.24
COL6A2-205ENST00000413758 MTHFSP49914 203 aa22.81■■□□□ 1.24
COL6A2-205ENST00000413758 C1orf141Q5JVX7 400 aa22.81■■□□□ 1.24
COL6A2-205ENST00000413758 ASAP1Q9ULH1 1129 aa22.81■■□□□ 1.24
COL6A2-205ENST00000413758 LOC102724428A0A0B4J2F2 783 aa22.8■■□□□ 1.24
COL6A2-205ENST00000413758 SIK1P57059 783 aa22.8■■□□□ 1.24
COL6A2-205ENST00000413758 MSL1Q68DK7 614 aa22.8■■□□□ 1.24
COL6A2-205ENST00000413758 FLAD1Q8NFF5 587 aa22.8■■□□□ 1.24
COL6A2-205ENST00000413758 IL13P35225 146 aa22.79■■□□□ 1.24
COL6A2-205ENST00000413758 DCAF5Q96JK2 942 aa22.79■■□□□ 1.24
COL6A2-205ENST00000413758 TAF1LQ8IZX4 1826 aa22.78■■□□□ 1.24
COL6A2-205ENST00000413758 PER1O15534 1290 aaPredicted RBP22.78■■□□□ 1.24
COL6A2-205ENST00000413758 PHF14O94880 888 aa22.78■■□□□ 1.24
COL6A2-205ENST00000413758 ATP6V1AP38606 617 aa22.78■■□□□ 1.24
COL6A2-205ENST00000413758 ERVV-2B6SEH9 535 aa22.77■■□□□ 1.24
COL6A2-205ENST00000413758 CABP4P57796 275 aa22.77■■□□□ 1.24
COL6A2-205ENST00000413758 C4BP0C0L5 1744 aa22.77■■□□□ 1.23
COL6A2-205ENST00000413758 RBM42Q9BTD8 480 aaKnown RBP22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms