RNA–Protein interactions for RNA: ENST00000413380.5

HDAC9-206, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 799 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-206ENST00000413380 SPATA31A5Q5VU36 1347 aa15.41■□□□□ 0.06
HDAC9-206ENST00000413380 SPATA31A7Q8IWB4 1347 aa15.41■□□□□ 0.06
HDAC9-206ENST00000413380 HMOX1P09601 288 aa15.4■□□□□ 0.06
HDAC9-206ENST00000413380 CSB-PGBD3P0DP91 1061 aa15.4■□□□□ 0.06
HDAC9-206ENST00000413380 EVA1CP58658 441 aa15.4■□□□□ 0.06
HDAC9-206ENST00000413380 VPS72Q15906 364 aa15.4■□□□□ 0.06
HDAC9-206ENST00000413380 NLRP2Q9NX02 1062 aa15.4■□□□□ 0.06
HDAC9-206ENST00000413380 OVOS2A0A0G2JMS6 1433 aa15.4■□□□□ 0.06
HDAC9-206ENST00000413380 VIRMAQ69YN4 1812 aaKnown RBP15.4■□□□□ 0.06
HDAC9-206ENST00000413380 GLI3P10071 1580 aa15.4■□□□□ 0.06
HDAC9-206ENST00000413380 AFF2P51816 1311 aa15.4■□□□□ 0.06
HDAC9-206ENST00000413380 SPATA31A1Q5TZJ5 1347 aa15.4■□□□□ 0.06
HDAC9-206ENST00000413380 THSD7AQ9UPZ6 1657 aa15.39■□□□□ 0.05
HDAC9-206ENST00000413380 PRKAR2BP31323 418 aa15.39■□□□□ 0.05
HDAC9-206ENST00000413380 MEX3CQ5U5Q3 659 aaKnown RBP15.39■□□□□ 0.05
HDAC9-206ENST00000413380 TOM1L2Q6ZVM7 507 aa15.39■□□□□ 0.05
HDAC9-206ENST00000413380 STRN4Q9NRL3 753 aa15.39■□□□□ 0.05
HDAC9-206ENST00000413380 THRAP3Q9Y2W1 955 aaKnown RBP15.39■□□□□ 0.05
HDAC9-206ENST00000413380 ADAMTS7Q9UKP4 1686 aa15.38■□□□□ 0.05
HDAC9-206ENST00000413380 NGEFQ8N5V2 710 aa15.38■□□□□ 0.05
HDAC9-206ENST00000413380 USHBP1Q8N6Y0 703 aa15.38■□□□□ 0.05
HDAC9-206ENST00000413380 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.38■□□□□ 0.05
HDAC9-206ENST00000413380 USP21Q9UK80 565 aa15.38■□□□□ 0.05
HDAC9-206ENST00000413380 LRRC37A3O60309 1634 aa15.37■□□□□ 0.05
HDAC9-206ENST00000413380 BARGINQ6ZT62 677 aa15.36■□□□□ 0.05
HDAC9-206ENST00000413380 TCP11L2Q8N4U5 519 aa15.36■□□□□ 0.05
HDAC9-206ENST00000413380 PHACTR3Q96KR7 559 aa15.36■□□□□ 0.05
HDAC9-206ENST00000413380 CCDC146Q8IYE0 955 aa15.35■□□□□ 0.05
HDAC9-206ENST00000413380 RAPGEF4Q8WZA2 1011 aa15.35■□□□□ 0.05
HDAC9-206ENST00000413380 CDCA7Q9BWT1 371 aaPredicted RBP15.35■□□□□ 0.05
HDAC9-206ENST00000413380 MAPK8IP3Q9UPT6 1336 aa15.35■□□□□ 0.05
HDAC9-206ENST00000413380 APAF1O14727 1248 aa15.34■□□□□ 0.05
HDAC9-206ENST00000413380 IL2RBP14784 551 aa15.34■□□□□ 0.05
HDAC9-206ENST00000413380 AMOTQ4VCS5 1084 aa15.34■□□□□ 0.05
HDAC9-206ENST00000413380 ILDR1Q86SU0 546 aaPredicted RBP15.34■□□□□ 0.05
HDAC9-206ENST00000413380 TRPC5Q9UL62 973 aaPredicted RBP15.34■□□□□ 0.05
HDAC9-206ENST00000413380 SCN11AQ9UI33 1791 aa15.34■□□□□ 0.05
HDAC9-206ENST00000413380 TNS2Q63HR2 1409 aa15.34■□□□□ 0.05
HDAC9-206ENST00000413380 NEFMP07197 916 aa15.33■□□□□ 0.04
HDAC9-206ENST00000413380 TATP17735 454 aaPredicted RBP15.33■□□□□ 0.04
HDAC9-206ENST00000413380 TMPOP42166 694 aaKnown RBP15.33■□□□□ 0.04
HDAC9-206ENST00000413380 NFE2L2Q16236 605 aa15.33■□□□□ 0.04
HDAC9-206ENST00000413380 CCDC27Q2M243 656 aa15.33■□□□□ 0.04
HDAC9-206ENST00000413380 GAS2L2Q8NHY3 880 aa15.33■□□□□ 0.04
HDAC9-206ENST00000413380 ZNF772Q68DY9 489 aaPredicted RBP15.32■□□□□ 0.04
HDAC9-206ENST00000413380 ONECUT3O60422 494 aaPredicted RBP15.31■□□□□ 0.04
HDAC9-206ENST00000413380 MTHFSDQ2M296 383 aaKnown RBP15.31■□□□□ 0.04
HDAC9-206ENST00000413380 PLEKHO1Q53GL0 409 aaPredicted RBP15.31■□□□□ 0.04
HDAC9-206ENST00000413380 GJD4Q96KN9 370 aaPredicted RBP15.31■□□□□ 0.04
HDAC9-206ENST00000413380 ZBED9Q6R2W3 1325 aa15.31■□□□□ 0.04
HDAC9-206ENST00000413380 ZNF521Q96K83 1311 aa15.31■□□□□ 0.04
HDAC9-206ENST00000413380 SIPA1L3O60292 1781 aaPredicted RBP15.31■□□□□ 0.04
HDAC9-206ENST00000413380 HTATSF1O43719 755 aaKnown RBP15.3■□□□□ 0.04
HDAC9-206ENST00000413380 POLA2Q14181 598 aa15.3■□□□□ 0.04
HDAC9-206ENST00000413380 MAP3K5Q99683 1374 aa15.29■□□□□ 0.04
HDAC9-206ENST00000413380 ABCB7O75027 752 aa15.29■□□□□ 0.04
HDAC9-206ENST00000413380 HNRNPUQ00839 825 aaKnown RBP eCLIP15.29■□□□□ 0.04
HDAC9-206ENST00000413380 SPG7Q9UQ90 795 aa15.29■□□□□ 0.04
HDAC9-206ENST00000413380 PCDH11XQ9BZA7 1347 aa15.28■□□□□ 0.04
HDAC9-206ENST00000413380 PCDH11YQ9BZA8 1340 aa15.28■□□□□ 0.04
HDAC9-206ENST00000413380 ZCRB1Q8TBF4 217 aaKnown RBP15.28■□□□□ 0.04
HDAC9-206ENST00000413380 QTRT2Q9H974 415 aaKnown RBP15.28■□□□□ 0.04
HDAC9-206ENST00000413380 USP35Q9P2H5 1018 aa15.28■□□□□ 0.04
HDAC9-206ENST00000413380 TRIM35Q9UPQ4 493 aa15.28■□□□□ 0.04
HDAC9-206ENST00000413380 MRC1P22897 1456 aa15.27■□□□□ 0.04
HDAC9-206ENST00000413380 CEMIPQ8WUJ3 1361 aa15.27■□□□□ 0.04
HDAC9-206ENST00000413380 BRWD3Q6RI45 1802 aa15.27■□□□□ 0.04
HDAC9-206ENST00000413380 TOGARAM1Q9Y4F4 1720 aa15.27■□□□□ 0.04
HDAC9-206ENST00000413380 LMOD3Q0VAK6 560 aa15.27■□□□□ 0.04
HDAC9-206ENST00000413380 AKAP4Q5JQC9 854 aa15.27■□□□□ 0.04
HDAC9-206ENST00000413380 RGS17Q9UGC6 210 aaPredicted RBP15.27■□□□□ 0.04
HDAC9-206ENST00000413380 CYP27B1O15528 508 aa15.26■□□□□ 0.03
HDAC9-206ENST00000413380 RIPK4P57078 832 aa15.26■□□□□ 0.03
HDAC9-206ENST00000413380 NKX1-1Q15270 411 aaPredicted RBP15.26■□□□□ 0.03
HDAC9-206ENST00000413380 ZNF530Q6P9A1 599 aaPredicted RBP15.26■□□□□ 0.03
HDAC9-206ENST00000413380 WWC1Q8IX03 1113 aa15.26■□□□□ 0.03
HDAC9-206ENST00000413380 CCDC9Q9Y3X0 531 aaKnown RBP15.26■□□□□ 0.03
HDAC9-206ENST00000413380 ITGB4P16144 1822 aa15.25■□□□□ 0.03
HDAC9-206ENST00000413380 GNAT3A8MTJ3 354 aa15.25■□□□□ 0.03
HDAC9-206ENST00000413380 PHKG2P15735 406 aa15.25■□□□□ 0.03
HDAC9-206ENST00000413380 FAM98CQ17RN3 349 aaKnown RBP15.25■□□□□ 0.03
HDAC9-206ENST00000413380 IFNL2Q8IZJ0 200 aa15.25■□□□□ 0.03
HDAC9-206ENST00000413380 RRP7AQ9Y3A4 280 aaKnown RBP15.25■□□□□ 0.03
HDAC9-206ENST00000413380 BCL9O00512 1426 aa15.25■□□□□ 0.03
HDAC9-206ENST00000413380 KDM6AO15550 1401 aaPredicted RBP15.25■□□□□ 0.03
HDAC9-206ENST00000413380 IL16Q14005 1332 aa15.24■□□□□ 0.03
HDAC9-206ENST00000413380 RBM6P78332 1123 aaKnown RBP15.24■□□□□ 0.03
HDAC9-206ENST00000413380 WDR63Q8IWG1 891 aa15.24■□□□□ 0.03
HDAC9-206ENST00000413380 SBF2Q86WG5 1849 aa15.23■□□□□ 0.03
HDAC9-206ENST00000413380 EXOC5O00471 708 aa15.23■□□□□ 0.03
HDAC9-206ENST00000413380 HSP90AB1P08238 724 aaKnown RBP15.23■□□□□ 0.03
HDAC9-206ENST00000413380 DDB1Q16531 1140 aa15.23■□□□□ 0.03
HDAC9-206ENST00000413380 C1orf141Q5JVX7 400 aa15.23■□□□□ 0.03
HDAC9-206ENST00000413380 KDM3BQ7LBC6 1761 aa15.23■□□□□ 0.03
HDAC9-206ENST00000413380 DOT1LQ8TEK3 1739 aa15.23■□□□□ 0.03
HDAC9-206ENST00000413380 PDE3BQ13370 1112 aa15.22■□□□□ 0.03
HDAC9-206ENST00000413380 DCAF5Q96JK2 942 aa15.22■□□□□ 0.03
HDAC9-206ENST00000413380 PAPPAQ13219 1627 aa15.21■□□□□ 0.03
HDAC9-206ENST00000413380 CALD1Q05682 793 aaKnown RBP15.21■□□□□ 0.03
HDAC9-206ENST00000413380 NEUROD2Q15784 382 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms