RNA–Protein interactions for RNA: ENST00000413288.1

FAM238B-201, Transcript of family with sequence similarity 238 member B, humanhuman

TSL 3

Gene FAM238B, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM238B-201ENST00000413288 ABCC6O95255 1503 aa12.92□□□□□ -0.34
FAM238B-201ENST00000413288 BCAR3O75815 825 aa12.91□□□□□ -0.34
FAM238B-201ENST00000413288 MCM10Q7L590 875 aa12.91□□□□□ -0.34
FAM238B-201ENST00000413288 GAS2L2Q8NHY3 880 aa12.91□□□□□ -0.34
FAM238B-201ENST00000413288 LRRC37A3O60309 1634 aa12.91□□□□□ -0.34
FAM238B-201ENST00000413288 CALD1Q05682 793 aaKnown RBP12.9□□□□□ -0.34
FAM238B-201ENST00000413288 ERBB3P21860 1342 aa12.89□□□□□ -0.35
FAM238B-201ENST00000413288 COL22A1Q8NFW1 1626 aaPredicted RBP12.89□□□□□ -0.35
FAM238B-201ENST00000413288 CSB-PGBD3P0DP91 1061 aa12.89□□□□□ -0.35
FAM238B-201ENST00000413288 GNAI1P63096 354 aa12.89□□□□□ -0.35
FAM238B-201ENST00000413288 ERICH6BQ5W0A0 696 aa12.89□□□□□ -0.35
FAM238B-201ENST00000413288 IFT57Q9NWB7 429 aa12.89□□□□□ -0.35
FAM238B-201ENST00000413288 CPDO75976 1380 aa12.89□□□□□ -0.35
FAM238B-201ENST00000413288 NCAPD2Q15021 1401 aa12.88□□□□□ -0.35
FAM238B-201ENST00000413288 COL16A1Q07092 1604 aaPredicted RBP12.88□□□□□ -0.35
FAM238B-201ENST00000413288 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.88□□□□□ -0.35
FAM238B-201ENST00000413288 RTF1Q92541 710 aaKnown RBP12.88□□□□□ -0.35
FAM238B-201ENST00000413288 RNF39Q9H2S5 420 aa12.88□□□□□ -0.35
FAM238B-201ENST00000413288 PRDM11Q9NQV5 511 aa12.88□□□□□ -0.35
FAM238B-201ENST00000413288 NLRP2Q9NX02 1062 aa12.88□□□□□ -0.35
FAM238B-201ENST00000413288 PPP4R2Q9NY27 417 aa12.88□□□□□ -0.35
FAM238B-201ENST00000413288 MAP3K5Q99683 1374 aa12.87□□□□□ -0.35
FAM238B-201ENST00000413288 ZNF853P0CG23 659 aa12.87□□□□□ -0.35
FAM238B-201ENST00000413288 RARSP54136 660 aaKnown RBP12.87□□□□□ -0.35
FAM238B-201ENST00000413288 PIP4K2BP78356 416 aa12.87□□□□□ -0.35
FAM238B-201ENST00000413288 C20orf194Q5TEA3 1177 aa12.87□□□□□ -0.35
FAM238B-201ENST00000413288 EXOC6Q8TAG9 804 aa12.87□□□□□ -0.35
FAM238B-201ENST00000413288 BCL2L13Q9BXK5 485 aa12.87□□□□□ -0.35
FAM238B-201ENST00000413288 MBIPQ9NS73 344 aa12.87□□□□□ -0.35
FAM238B-201ENST00000413288 PARP4Q9UKK3 1724 aaKnown RBP12.86□□□□□ -0.35
FAM238B-201ENST00000413288 GNAT3A8MTJ3 354 aa12.86□□□□□ -0.35
FAM238B-201ENST00000413288 CFAP44Q96MT7 982 aa12.86□□□□□ -0.35
FAM238B-201ENST00000413288 CRBNQ96SW2 442 aa12.86□□□□□ -0.35
FAM238B-201ENST00000413288 U3KPZ7 1027 aaPredicted RBP12.86□□□□□ -0.35
FAM238B-201ENST00000413288 CRB1P82279 1406 aa12.86□□□□□ -0.35
FAM238B-201ENST00000413288 COL14A1Q05707 1796 aaKnown RBP12.85□□□□□ -0.35
FAM238B-201ENST00000413288 SCN11AQ9UI33 1791 aa12.85□□□□□ -0.35
FAM238B-201ENST00000413288 TOM1O60784 492 aa12.85□□□□□ -0.35
FAM238B-201ENST00000413288 CANXP27824 592 aaKnown RBP12.85□□□□□ -0.35
FAM238B-201ENST00000413288 PLEKHO1Q53GL0 409 aaPredicted RBP12.85□□□□□ -0.35
FAM238B-201ENST00000413288 B4GALNT3Q6L9W6 998 aa12.85□□□□□ -0.35
FAM238B-201ENST00000413288 FRAT1Q92837 279 aaPredicted RBP12.85□□□□□ -0.35
FAM238B-201ENST00000413288 PKD1L3Q7Z443 1732 aa12.85□□□□□ -0.35
FAM238B-201ENST00000413288 HTATSF1O43719 755 aaKnown RBP12.84□□□□□ -0.35
FAM238B-201ENST00000413288 MYCNP04198 464 aaPredicted RBP12.84□□□□□ -0.35
FAM238B-201ENST00000413288 CT47B1P0C2W7 299 aaPredicted RBP12.84□□□□□ -0.35
FAM238B-201ENST00000413288 ZNF530Q6P9A1 599 aaPredicted RBP12.84□□□□□ -0.35
FAM238B-201ENST00000413288 SIPA1L3O60292 1781 aaPredicted RBP12.84□□□□□ -0.35
FAM238B-201ENST00000413288 KDM3BQ7LBC6 1761 aa12.84□□□□□ -0.35
FAM238B-201ENST00000413288 PLCH1Q4KWH8 1693 aa12.83□□□□□ -0.35
FAM238B-201ENST00000413288 UBAP1LF5GYI3 381 aa12.83□□□□□ -0.36
FAM238B-201ENST00000413288 ELL2O00472 640 aaPredicted RBP12.83□□□□□ -0.36
FAM238B-201ENST00000413288 TSPYL6Q8N831 410 aa12.83□□□□□ -0.36
FAM238B-201ENST00000413288 SMC4Q9NTJ3 1288 aa12.83□□□□□ -0.36
FAM238B-201ENST00000413288 MIS18AQ9NYP9 233 aa12.83□□□□□ -0.36
FAM238B-201ENST00000413288 COL5A2P05997 1499 aaPredicted RBP12.83□□□□□ -0.36
FAM238B-201ENST00000413288 MEGF6O75095 1541 aa12.83□□□□□ -0.36
FAM238B-201ENST00000413288 CHL1O00533 1208 aa12.82□□□□□ -0.36
FAM238B-201ENST00000413288 TATP17735 454 aaPredicted RBP12.82□□□□□ -0.36
FAM238B-201ENST00000413288 AMOTQ4VCS5 1084 aa12.82□□□□□ -0.36
FAM238B-201ENST00000413288 IL17REQ8NFR9 667 aa12.82□□□□□ -0.36
FAM238B-201ENST00000413288 SSH1Q8WYL5 1049 aa12.82□□□□□ -0.36
FAM238B-201ENST00000413288 RAPGEF4Q8WZA2 1011 aa12.82□□□□□ -0.36
FAM238B-201ENST00000413288 STRN4Q9NRL3 753 aa12.82□□□□□ -0.36
FAM238B-201ENST00000413288 TNNQ9UQP3 1299 aa12.82□□□□□ -0.36
FAM238B-201ENST00000413288 VAMP4O75379 141 aa12.81□□□□□ -0.36
FAM238B-201ENST00000413288 TWISTNBQ3B726 338 aaPredicted RBP12.81□□□□□ -0.36
FAM238B-201ENST00000413288 AKAP4Q5JQC9 854 aa12.81□□□□□ -0.36
FAM238B-201ENST00000413288 C1orf141Q5JVX7 400 aa12.81□□□□□ -0.36
FAM238B-201ENST00000413288 TOM1L2Q6ZVM7 507 aa12.81□□□□□ -0.36
FAM238B-201ENST00000413288 C8orf58Q8NAV2 365 aa12.81□□□□□ -0.36
FAM238B-201ENST00000413288 TSPYL4Q9UJ04 414 aa12.81□□□□□ -0.36
FAM238B-201ENST00000413288 WDR17Q8IZU2 1322 aa12.81□□□□□ -0.36
FAM238B-201ENST00000413288 WNK3Q9BYP7 1800 aa12.81□□□□□ -0.36
FAM238B-201ENST00000413288 ADAMTS7Q9UKP4 1686 aa12.8□□□□□ -0.36
FAM238B-201ENST00000413288 SHANK3Q9BYB0 1731 aa12.8□□□□□ -0.36
FAM238B-201ENST00000413288 TCERG1O14776 1098 aaKnown RBP12.8□□□□□ -0.36
FAM238B-201ENST00000413288 EVA1CP58658 441 aa12.8□□□□□ -0.36
FAM238B-201ENST00000413288 KRT24Q2M2I5 525 aa12.8□□□□□ -0.36
FAM238B-201ENST00000413288 LGR6Q9HBX8 967 aa12.8□□□□□ -0.36
FAM238B-201ENST00000413288 MPRIPQ6WCQ1 1025 aa12.79□□□□□ -0.36
FAM238B-201ENST00000413288 PANK1Q8TE04 598 aa12.79□□□□□ -0.36
FAM238B-201ENST00000413288 CCDC136Q96JN2 1154 aa12.79□□□□□ -0.36
FAM238B-201ENST00000413288 CACNA1FO60840 1977 aa12.78□□□□□ -0.36
FAM238B-201ENST00000413288 RNMTO43148 476 aaKnown RBP12.78□□□□□ -0.36
FAM238B-201ENST00000413288 ALDH1L2Q3SY69 923 aa12.78□□□□□ -0.36
FAM238B-201ENST00000413288 ZKSCAN2Q63HK3 967 aa12.78□□□□□ -0.36
FAM238B-201ENST00000413288 NRAPQ86VF7 1730 aa12.78□□□□□ -0.36
FAM238B-201ENST00000413288 NUTM2BA6NNL0 878 aaPredicted RBP12.77□□□□□ -0.37
FAM238B-201ENST00000413288 NUTM2EB1AL46 878 aaPredicted RBP12.77□□□□□ -0.37
FAM238B-201ENST00000413288 TAF7Q15545 349 aaPredicted RBP12.77□□□□□ -0.37
FAM238B-201ENST00000413288 LARP1Q6PKG0 1096 aaKnown RBP12.77□□□□□ -0.37
FAM238B-201ENST00000413288 NUTM2AQ8IVF1 878 aaPredicted RBP12.77□□□□□ -0.37
FAM238B-201ENST00000413288 CLUAP1Q96AJ1 413 aa12.77□□□□□ -0.37
FAM238B-201ENST00000413288 BTG4Q9NY30 223 aa12.77□□□□□ -0.37
FAM238B-201ENST00000413288 NOB1Q9ULX3 412 aaKnown RBP12.77□□□□□ -0.37
FAM238B-201ENST00000413288 SPG7Q9UQ90 795 aa12.77□□□□□ -0.37
FAM238B-201ENST00000413288 COG6Q9Y2V7 657 aa12.77□□□□□ -0.37
FAM238B-201ENST00000413288 CEMIPQ8WUJ3 1361 aa12.77□□□□□ -0.37
FAM238B-201ENST00000413288 TEFQ10587 303 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms