RNA–Protein interactions for RNA: ENST00000412585.6

HLA-B-249, Transcript of major histocompatibility complex, class I, B, humanhuman

APPRIS P1 BASIC

Gene HLA-B, Length 1,547 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-249ENST00000412585 MEGF6O75095 1541 aa21.98■■□□□ 1.11
HLA-B-249ENST00000412585 IL2RBP14784 551 aa21.97■■□□□ 1.11
HLA-B-249ENST00000412585 TATP17735 454 aaPredicted RBP21.97■■□□□ 1.11
HLA-B-249ENST00000412585 NEFLP07196 543 aa21.96■■□□□ 1.11
HLA-B-249ENST00000412585 OVOS2A0A0G2JMS6 1433 aa21.96■■□□□ 1.11
HLA-B-249ENST00000412585 RUNDC1Q96C34 613 aa21.96■■□□□ 1.11
HLA-B-249ENST00000412585 GJD4Q96KN9 370 aaPredicted RBP21.96■■□□□ 1.11
HLA-B-249ENST00000412585 CDCA7Q9BWT1 371 aaPredicted RBP21.96■■□□□ 1.11
HLA-B-249ENST00000412585 QTRT2Q9H974 415 aaKnown RBP21.96■■□□□ 1.11
HLA-B-249ENST00000412585 DISP2A7MBM2 1401 aa21.95■■□□□ 1.1
HLA-B-249ENST00000412585 BARGINQ6ZT62 677 aa21.95■■□□□ 1.1
HLA-B-249ENST00000412585 CCDC146Q8IYE0 955 aa21.95■■□□□ 1.1
HLA-B-249ENST00000412585 LRRC37A3O60309 1634 aa21.94■■□□□ 1.1
HLA-B-249ENST00000412585 DLG5Q8TDM6 1919 aa21.94■■□□□ 1.1
HLA-B-249ENST00000412585 THSD7AQ9UPZ6 1657 aa21.93■■□□□ 1.1
HLA-B-249ENST00000412585 SHANK3Q9BYB0 1731 aa21.93■■□□□ 1.1
HLA-B-249ENST00000412585 PLEKHF1Q96S99 279 aa21.92■■□□□ 1.1
HLA-B-249ENST00000412585 AMOTQ4VCS5 1084 aa21.91■■□□□ 1.1
HLA-B-249ENST00000412585 PLEKHO1Q53GL0 409 aaPredicted RBP21.91■■□□□ 1.1
HLA-B-249ENST00000412585 A0A0G2JS52 829 aa21.9■■□□□ 1.1
HLA-B-249ENST00000412585 MYT1Q01538 1121 aa21.9■■□□□ 1.1
HLA-B-249ENST00000412585 FAM98CQ17RN3 349 aaKnown RBP21.9■■□□□ 1.1
HLA-B-249ENST00000412585 TNS2Q63HR2 1409 aa21.9■■□□□ 1.1
HLA-B-249ENST00000412585 VIRMAQ69YN4 1812 aaKnown RBP21.9■■□□□ 1.1
HLA-B-249ENST00000412585 RBM6P78332 1123 aaKnown RBP21.9■■□□□ 1.1
HLA-B-249ENST00000412585 ERICH6BQ5W0A0 696 aa21.9■■□□□ 1.1
HLA-B-249ENST00000412585 GAS2L2Q8NHY3 880 aa21.9■■□□□ 1.1
HLA-B-249ENST00000412585 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.9■■□□□ 1.1
HLA-B-249ENST00000412585 SPG7Q9UQ90 795 aa21.9■■□□□ 1.1
HLA-B-249ENST00000412585 PHACTR3Q96KR7 559 aa21.88■■□□□ 1.09
HLA-B-249ENST00000412585 PCDH11XQ9BZA7 1347 aa21.87■■□□□ 1.09
HLA-B-249ENST00000412585 PCDH11YQ9BZA8 1340 aa21.87■■□□□ 1.09
HLA-B-249ENST00000412585 DDB1Q16531 1140 aa21.86■■□□□ 1.09
HLA-B-249ENST00000412585 ZCRB1Q8TBF4 217 aaKnown RBP21.86■■□□□ 1.09
HLA-B-249ENST00000412585 APAF1O14727 1248 aa21.85■■□□□ 1.09
HLA-B-249ENST00000412585 RXRBP28702 533 aa21.85■■□□□ 1.09
HLA-B-249ENST00000412585 NFE2L2Q16236 605 aa21.85■■□□□ 1.09
HLA-B-249ENST00000412585 ZNF530Q6P9A1 599 aaPredicted RBP21.85■■□□□ 1.09
HLA-B-249ENST00000412585 RGS17Q9UGC6 210 aaPredicted RBP21.85■■□□□ 1.09
HLA-B-249ENST00000412585 EXOC5O00471 708 aa21.85■■□□□ 1.09
HLA-B-249ENST00000412585 MTHFSDQ2M296 383 aaKnown RBP21.85■■□□□ 1.09
HLA-B-249ENST00000412585 C1orf141Q5JVX7 400 aa21.85■■□□□ 1.09
HLA-B-249ENST00000412585 BRWD3Q6RI45 1802 aa21.83■■□□□ 1.09
HLA-B-249ENST00000412585 TMPOP42166 694 aaKnown RBP21.83■■□□□ 1.09
HLA-B-249ENST00000412585 MAP3K5Q99683 1374 aa21.82■■□□□ 1.08
HLA-B-249ENST00000412585 LMOD3Q0VAK6 560 aa21.82■■□□□ 1.08
HLA-B-249ENST00000412585 SCN11AQ9UI33 1791 aa21.82■■□□□ 1.08
HLA-B-249ENST00000412585 ONECUT3O60422 494 aaPredicted RBP21.81■■□□□ 1.08
HLA-B-249ENST00000412585 NEUROD2Q15784 382 aa21.81■■□□□ 1.08
HLA-B-249ENST00000412585 IFNL2Q8IZJ0 200 aa21.81■■□□□ 1.08
HLA-B-249ENST00000412585 NGEFQ8N5V2 710 aa21.81■■□□□ 1.08
HLA-B-249ENST00000412585 RRP7AQ9Y3A4 280 aaKnown RBP21.81■■□□□ 1.08
HLA-B-249ENST00000412585 RIPK4P57078 832 aa21.8■■□□□ 1.08
HLA-B-249ENST00000412585 AKAP4Q5JQC9 854 aa21.8■■□□□ 1.08
HLA-B-249ENST00000412585 POTEAQ6S8J7 498 aa21.8■■□□□ 1.08
HLA-B-249ENST00000412585 HSP90AB1P08238 724 aaKnown RBP21.8■■□□□ 1.08
HLA-B-249ENST00000412585 PDE3BQ13370 1112 aa21.8■■□□□ 1.08
HLA-B-249ENST00000412585 SEPT12Q8IYM1 358 aa21.8■■□□□ 1.08
HLA-B-249ENST00000412585 DDX54Q8TDD1 881 aaKnown RBP21.8■■□□□ 1.08
HLA-B-249ENST00000412585 GNAT3A8MTJ3 354 aa21.79■■□□□ 1.08
HLA-B-249ENST00000412585 PHKG2P15735 406 aa21.79■■□□□ 1.08
HLA-B-249ENST00000412585 RTF1Q92541 710 aaKnown RBP21.79■■□□□ 1.08
HLA-B-249ENST00000412585 ADAMTS7Q9UKP4 1686 aa21.78■■□□□ 1.08
HLA-B-249ENST00000412585 KAT6BQ8WYB5 2073 aa21.78■■□□□ 1.08
HLA-B-249ENST00000412585 CYP27B1O15528 508 aa21.77■■□□□ 1.08
HLA-B-249ENST00000412585 NCBP3Q53F19 620 aaKnown RBP21.77■■□□□ 1.08
HLA-B-249ENST00000412585 TSHZ2Q9NRE2 1034 aa21.77■■□□□ 1.08
HLA-B-249ENST00000412585 DOT1LQ8TEK3 1739 aa21.77■■□□□ 1.08
HLA-B-249ENST00000412585 RGS12O14924 1447 aa21.77■■□□□ 1.08
HLA-B-249ENST00000412585 SENP3-EIF4A1A0A087X0R7 540 aa21.76■■□□□ 1.07
HLA-B-249ENST00000412585 HTATSF1O43719 755 aaKnown RBP21.76■■□□□ 1.07
HLA-B-249ENST00000412585 SALL2Q9Y467 1007 aaPredicted RBP21.75■■□□□ 1.07
HLA-B-249ENST00000412585 RNF123Q5XPI4 1314 aa21.75■■□□□ 1.07
HLA-B-249ENST00000412585 CCDC27Q2M243 656 aa21.75■■□□□ 1.07
HLA-B-249ENST00000412585 TOGARAM1Q9Y4F4 1720 aa21.75■■□□□ 1.07
HLA-B-249ENST00000412585 DCAF5Q96JK2 942 aa21.74■■□□□ 1.07
HLA-B-249ENST00000412585 ITGB4P16144 1822 aa21.73■■□□□ 1.07
HLA-B-249ENST00000412585 KDM6AO15550 1401 aaPredicted RBP21.72■■□□□ 1.07
HLA-B-249ENST00000412585 MPRIPQ6WCQ1 1025 aa21.72■■□□□ 1.07
HLA-B-249ENST00000412585 SIPA1L3O60292 1781 aaPredicted RBP21.72■■□□□ 1.07
HLA-B-249ENST00000412585 CALD1Q05682 793 aaKnown RBP21.71■■□□□ 1.07
HLA-B-249ENST00000412585 NKX1-1Q15270 411 aaPredicted RBP21.71■■□□□ 1.07
HLA-B-249ENST00000412585 KRT27Q7Z3Y8 459 aa21.71■■□□□ 1.07
HLA-B-249ENST00000412585 MARCH10Q8NA82 808 aaPredicted RBP21.71■■□□□ 1.07
HLA-B-249ENST00000412585 TRIM35Q9UPQ4 493 aa21.71■■□□□ 1.07
HLA-B-249ENST00000412585 MCM10Q7L590 875 aa21.7■■□□□ 1.07
HLA-B-249ENST00000412585 SBF2Q86WG5 1849 aa21.7■■□□□ 1.06
HLA-B-249ENST00000412585 WWC1Q8IX03 1113 aa21.7■■□□□ 1.06
HLA-B-249ENST00000412585 MRC1P22897 1456 aa21.7■■□□□ 1.06
HLA-B-249ENST00000412585 RNMTO43148 476 aaKnown RBP21.69■■□□□ 1.06
HLA-B-249ENST00000412585 DCTN1Q14203 1278 aa21.69■■□□□ 1.06
HLA-B-249ENST00000412585 CEMIPQ8WUJ3 1361 aa21.68■■□□□ 1.06
HLA-B-249ENST00000412585 NHSQ6T4R5 1651 aa21.68■■□□□ 1.06
HLA-B-249ENST00000412585 TEFQ10587 303 aa21.68■■□□□ 1.06
HLA-B-249ENST00000412585 BCL9O00512 1426 aa21.66■■□□□ 1.06
HLA-B-249ENST00000412585 IL17REQ8NFR9 667 aa21.66■■□□□ 1.06
HLA-B-249ENST00000412585 THUMPD2Q9BTF0 503 aaKnown RBP21.66■■□□□ 1.06
HLA-B-249ENST00000412585 ERVV-2B6SEH9 535 aa21.65■■□□□ 1.06
HLA-B-249ENST00000412585 LGR6Q9HBX8 967 aa21.65■■□□□ 1.06
HLA-B-249ENST00000412585 CABP4P57796 275 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms