RNA–Protein interactions for RNA: ENST00000412036.6

CXXC1-202, Transcript of CXXC finger protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXXC1, Length 2,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-202ENST00000412036 IFT57Q9NWB7 429 aa23.44■■□□□ 1.34
CXXC1-202ENST00000412036 TNNQ9UQP3 1299 aa23.44■■□□□ 1.34
CXXC1-202ENST00000412036 COL5A2P05997 1499 aaPredicted RBP23.43■■□□□ 1.34
CXXC1-202ENST00000412036 GAS2L2Q8NHY3 880 aa23.43■■□□□ 1.34
CXXC1-202ENST00000412036 ABCC6O95255 1503 aa23.43■■□□□ 1.34
CXXC1-202ENST00000412036 UBAP1LF5GYI3 381 aa23.43■■□□□ 1.34
CXXC1-202ENST00000412036 HAP1P54257 671 aaPredicted RBP23.43■■□□□ 1.34
CXXC1-202ENST00000412036 EXOC6Q8TAG9 804 aa23.43■■□□□ 1.34
CXXC1-202ENST00000412036 CFAP44Q96MT7 982 aa23.43■■□□□ 1.34
CXXC1-202ENST00000412036 LMOD3Q0VAK6 560 aa23.42■■□□□ 1.34
CXXC1-202ENST00000412036 LRRC37A3O60309 1634 aa23.42■■□□□ 1.34
CXXC1-202ENST00000412036 COL22A1Q8NFW1 1626 aaPredicted RBP23.42■■□□□ 1.34
CXXC1-202ENST00000412036 C8orf58Q8NAV2 365 aa23.41■■□□□ 1.34
CXXC1-202ENST00000412036 LGR6Q9HBX8 967 aa23.41■■□□□ 1.34
CXXC1-202ENST00000412036 ELL2O00472 640 aaPredicted RBP23.4■■□□□ 1.34
CXXC1-202ENST00000412036 TOM1O60784 492 aa23.4■■□□□ 1.34
CXXC1-202ENST00000412036 CSB-PGBD3P0DP91 1061 aa23.4■■□□□ 1.34
CXXC1-202ENST00000412036 MAP3K5Q99683 1374 aa23.4■■□□□ 1.34
CXXC1-202ENST00000412036 GNAT3A8MTJ3 354 aa23.4■■□□□ 1.34
CXXC1-202ENST00000412036 CHL1O00533 1208 aa23.39■■□□□ 1.34
CXXC1-202ENST00000412036 GNAI1P63096 354 aa23.39■■□□□ 1.33
CXXC1-202ENST00000412036 LARP1Q6PKG0 1096 aaKnown RBP23.38■■□□□ 1.33
CXXC1-202ENST00000412036 SSH1Q8WYL5 1049 aa23.38■■□□□ 1.33
CXXC1-202ENST00000412036 CRBNQ96SW2 442 aa23.37■■□□□ 1.33
CXXC1-202ENST00000412036 ZNF530Q6P9A1 599 aaPredicted RBP23.36■■□□□ 1.33
CXXC1-202ENST00000412036 STRN4Q9NRL3 753 aa23.36■■□□□ 1.33
CXXC1-202ENST00000412036 WDR17Q8IZU2 1322 aa23.36■■□□□ 1.33
CXXC1-202ENST00000412036 VAMP4O75379 141 aa23.35■■□□□ 1.33
CXXC1-202ENST00000412036 B4GALNT3Q6L9W6 998 aa23.35■■□□□ 1.33
CXXC1-202ENST00000412036 MPRIPQ6WCQ1 1025 aa23.35■■□□□ 1.33
CXXC1-202ENST00000412036 RTF1Q92541 710 aaKnown RBP23.35■■□□□ 1.33
CXXC1-202ENST00000412036 TCERG1O14776 1098 aaKnown RBP23.35■■□□□ 1.33
CXXC1-202ENST00000412036 CEMIPQ8WUJ3 1361 aa23.34■■□□□ 1.33
CXXC1-202ENST00000412036 VIRMAQ69YN4 1812 aaKnown RBP23.34■■□□□ 1.33
CXXC1-202ENST00000412036 CALD1Q05682 793 aaKnown RBP23.34■■□□□ 1.33
CXXC1-202ENST00000412036 BTG4Q9NY30 223 aa23.34■■□□□ 1.33
CXXC1-202ENST00000412036 CERKQ8TCT0 537 aa23.33■■□□□ 1.33
CXXC1-202ENST00000412036 RLBP1P12271 317 aa23.33■■□□□ 1.32
CXXC1-202ENST00000412036 PLEKHO1Q53GL0 409 aaPredicted RBP23.33■■□□□ 1.32
CXXC1-202ENST00000412036 FRAT1Q92837 279 aaPredicted RBP23.33■■□□□ 1.32
CXXC1-202ENST00000412036 HTATSF1O43719 755 aaKnown RBP23.31■■□□□ 1.32
CXXC1-202ENST00000412036 ADAMTS2O95450 1211 aa23.31■■□□□ 1.32
CXXC1-202ENST00000412036 TOM1L2Q6ZVM7 507 aa23.31■■□□□ 1.32
CXXC1-202ENST00000412036 PANK1Q8TE04 598 aa23.31■■□□□ 1.32
CXXC1-202ENST00000412036 AKAP4Q5JQC9 854 aa23.3■■□□□ 1.32
CXXC1-202ENST00000412036 RAPGEF4Q8WZA2 1011 aa23.3■■□□□ 1.32
CXXC1-202ENST00000412036 PPP4R2Q9NY27 417 aa23.3■■□□□ 1.32
CXXC1-202ENST00000412036 CYP27B1O15528 508 aa23.29■■□□□ 1.32
CXXC1-202ENST00000412036 TWISTNBQ3B726 338 aaPredicted RBP23.29■■□□□ 1.32
CXXC1-202ENST00000412036 AMOTQ4VCS5 1084 aa23.29■■□□□ 1.32
CXXC1-202ENST00000412036 KCNQ3O43525 872 aa23.29■■□□□ 1.32
CXXC1-202ENST00000412036 ERICH6BQ5W0A0 696 aa23.29■■□□□ 1.32
CXXC1-202ENST00000412036 SMC4Q9NTJ3 1288 aa23.29■■□□□ 1.32
CXXC1-202ENST00000412036 USP35Q9P2H5 1018 aa23.29■■□□□ 1.32
CXXC1-202ENST00000412036 TSPYL4Q9UJ04 414 aa23.29■■□□□ 1.32
CXXC1-202ENST00000412036 KDM6AO15550 1401 aaPredicted RBP23.28■■□□□ 1.32
CXXC1-202ENST00000412036 NUTM2BA6NNL0 878 aaPredicted RBP23.28■■□□□ 1.32
CXXC1-202ENST00000412036 NUTM2EB1AL46 878 aaPredicted RBP23.28■■□□□ 1.32
CXXC1-202ENST00000412036 NUTM2AQ8IVF1 878 aaPredicted RBP23.28■■□□□ 1.32
CXXC1-202ENST00000412036 PKD1L3Q7Z443 1732 aa23.28■■□□□ 1.32
CXXC1-202ENST00000412036 CT47B1P0C2W7 299 aaPredicted RBP23.28■■□□□ 1.32
CXXC1-202ENST00000412036 COL14A1Q05707 1796 aaKnown RBP23.27■■□□□ 1.32
CXXC1-202ENST00000412036 RNMTO43148 476 aaKnown RBP23.27■■□□□ 1.32
CXXC1-202ENST00000412036 TATP17735 454 aaPredicted RBP23.27■■□□□ 1.32
CXXC1-202ENST00000412036 ADAMTS7Q9UKP4 1686 aa23.27■■□□□ 1.32
CXXC1-202ENST00000412036 CLUAP1Q96AJ1 413 aa23.26■■□□□ 1.31
CXXC1-202ENST00000412036 OVOS2A0A0G2JMS6 1433 aa23.26■■□□□ 1.31
CXXC1-202ENST00000412036 CARD10Q9BWT7 1032 aa23.26■■□□□ 1.31
CXXC1-202ENST00000412036 PHKG2P15735 406 aa23.25■■□□□ 1.31
CXXC1-202ENST00000412036 SHANK3Q9BYB0 1731 aa23.25■■□□□ 1.31
CXXC1-202ENST00000412036 EVA1CP58658 441 aa23.25■■□□□ 1.31
CXXC1-202ENST00000412036 NOB1Q9ULX3 412 aaKnown RBP23.25■■□□□ 1.31
CXXC1-202ENST00000412036 PLCH1Q4KWH8 1693 aa23.25■■□□□ 1.31
CXXC1-202ENST00000412036 TAF7Q15545 349 aaPredicted RBP23.24■■□□□ 1.31
CXXC1-202ENST00000412036 MRPL50Q8N5N7 158 aaKnown RBP23.24■■□□□ 1.31
CXXC1-202ENST00000412036 C1orf141Q5JVX7 400 aa23.23■■□□□ 1.31
CXXC1-202ENST00000412036 COG6Q9Y2V7 657 aa23.23■■□□□ 1.31
CXXC1-202ENST00000412036 SIPA1L3O60292 1781 aaPredicted RBP23.23■■□□□ 1.31
CXXC1-202ENST00000412036 TRIM27P14373 513 aa23.22■■□□□ 1.31
CXXC1-202ENST00000412036 KDM3BQ7LBC6 1761 aa23.22■■□□□ 1.31
CXXC1-202ENST00000412036 SCN11AQ9UI33 1791 aa23.21■■□□□ 1.31
CXXC1-202ENST00000412036 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.21■■□□□ 1.31
CXXC1-202ENST00000412036 ALDH1L2Q3SY69 923 aa23.2■■□□□ 1.3
CXXC1-202ENST00000412036 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.2■■□□□ 1.3
CXXC1-202ENST00000412036 NRAPQ86VF7 1730 aa23.2■■□□□ 1.3
CXXC1-202ENST00000412036 PARP4Q9UKK3 1724 aaKnown RBP23.2■■□□□ 1.3
CXXC1-202ENST00000412036 CANXP27824 592 aaKnown RBP23.2■■□□□ 1.3
CXXC1-202ENST00000412036 SPG7Q9UQ90 795 aa23.19■■□□□ 1.3
CXXC1-202ENST00000412036 PDE3AQ14432 1141 aa23.19■■□□□ 1.3
CXXC1-202ENST00000412036 IL2RBP14784 551 aa23.18■■□□□ 1.3
CXXC1-202ENST00000412036 LRP6O75581 1613 aa23.17■■□□□ 1.3
CXXC1-202ENST00000412036 ZKSCAN2Q63HK3 967 aa23.17■■□□□ 1.3
CXXC1-202ENST00000412036 IFNL2Q8IZJ0 200 aa23.17■■□□□ 1.3
CXXC1-202ENST00000412036 HSPA1LP34931 641 aa23.16■■□□□ 1.3
CXXC1-202ENST00000412036 TEFQ10587 303 aa23.16■■□□□ 1.3
CXXC1-202ENST00000412036 NECTIN2Q92692 538 aa23.16■■□□□ 1.3
CXXC1-202ENST00000412036 PRAMEF22A3QJZ6 481 aa23.16■■□□□ 1.3
CXXC1-202ENST00000412036 EIF4A1P60842 406 aaKnown RBP23.16■■□□□ 1.3
CXXC1-202ENST00000412036 ZCRB1Q8TBF4 217 aaKnown RBP23.16■■□□□ 1.3
CXXC1-202ENST00000412036 DISP2A7MBM2 1401 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms