RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 GAS2L2Q8NHY3 880 aa24.63■■□□□ 1.53
CDC42-204ENST00000411827 SPG7Q9UQ90 795 aa24.63■■□□□ 1.53
CDC42-204ENST00000411827 ATRNO75882 1429 aa24.61■■□□□ 1.53
CDC42-204ENST00000411827 GJD4Q96KN9 370 aaPredicted RBP24.6■■□□□ 1.53
CDC42-204ENST00000411827 RGPD2P0DJD1 1756 aa24.59■■□□□ 1.53
CDC42-204ENST00000411827 LMOD3Q0VAK6 560 aa24.59■■□□□ 1.53
CDC42-204ENST00000411827 QTRT2Q9H974 415 aaKnown RBP24.59■■□□□ 1.53
CDC42-204ENST00000411827 OVOS2A0A0G2JMS6 1433 aa24.59■■□□□ 1.53
CDC42-204ENST00000411827 NFE2L2Q16236 605 aa24.58■■□□□ 1.53
CDC42-204ENST00000411827 CCDC146Q8IYE0 955 aa24.58■■□□□ 1.53
CDC42-204ENST00000411827 USP35Q9P2H5 1018 aa24.58■■□□□ 1.53
CDC42-204ENST00000411827 APAF1O14727 1248 aa24.57■■□□□ 1.52
CDC42-204ENST00000411827 HTATSF1O43719 755 aaKnown RBP24.57■■□□□ 1.52
CDC42-204ENST00000411827 PARP4Q9UKK3 1724 aaKnown RBP24.56■■□□□ 1.52
CDC42-204ENST00000411827 DISP2A7MBM2 1401 aa24.56■■□□□ 1.52
CDC42-204ENST00000411827 TMPOP42166 694 aaKnown RBP24.56■■□□□ 1.52
CDC42-204ENST00000411827 CCDC27Q2M243 656 aa24.56■■□□□ 1.52
CDC42-204ENST00000411827 PHACTR3Q96KR7 559 aa24.56■■□□□ 1.52
CDC42-204ENST00000411827 ONECUT3O60422 494 aaPredicted RBP24.55■■□□□ 1.52
CDC42-204ENST00000411827 ZCRB1Q8TBF4 217 aaKnown RBP24.55■■□□□ 1.52
CDC42-204ENST00000411827 MEGF6O75095 1541 aa24.54■■□□□ 1.52
CDC42-204ENST00000411827 EXOC5O00471 708 aa24.53■■□□□ 1.52
CDC42-204ENST00000411827 HSP90AB1P08238 724 aaKnown RBP24.53■■□□□ 1.52
CDC42-204ENST00000411827 RBM6P78332 1123 aaKnown RBP24.53■■□□□ 1.52
CDC42-204ENST00000411827 C1orf141Q5JVX7 400 aa24.53■■□□□ 1.52
CDC42-204ENST00000411827 PCDH11XQ9BZA7 1347 aa24.53■■□□□ 1.52
CDC42-204ENST00000411827 PCDH11YQ9BZA8 1340 aa24.53■■□□□ 1.52
CDC42-204ENST00000411827 HNRNPUQ00839 825 aaKnown RBP eCLIP24.52■■□□□ 1.52
CDC42-204ENST00000411827 MTHFSDQ2M296 383 aaKnown RBP24.52■■□□□ 1.52
CDC42-204ENST00000411827 AKAP4Q5JQC9 854 aa24.52■■□□□ 1.52
CDC42-204ENST00000411827 RIPK4P57078 832 aa24.51■■□□□ 1.51
CDC42-204ENST00000411827 CALD1Q05682 793 aaKnown RBP24.51■■□□□ 1.51
CDC42-204ENST00000411827 IFNL2Q8IZJ0 200 aa24.51■■□□□ 1.51
CDC42-204ENST00000411827 GNAT3A8MTJ3 354 aa24.5■■□□□ 1.51
CDC42-204ENST00000411827 DDB1Q16531 1140 aa24.5■■□□□ 1.51
CDC42-204ENST00000411827 ZNF530Q6P9A1 599 aaPredicted RBP24.5■■□□□ 1.51
CDC42-204ENST00000411827 RTF1Q92541 710 aaKnown RBP24.5■■□□□ 1.51
CDC42-204ENST00000411827 FAM98CQ17RN3 349 aaKnown RBP24.49■■□□□ 1.51
CDC42-204ENST00000411827 PKD1L3Q7Z443 1732 aa24.49■■□□□ 1.51
CDC42-204ENST00000411827 TNS2Q63HR2 1409 aa24.48■■□□□ 1.51
CDC42-204ENST00000411827 MAP3K5Q99683 1374 aa24.48■■□□□ 1.51
CDC42-204ENST00000411827 ZBED9Q6R2W3 1325 aa24.47■■□□□ 1.51
CDC42-204ENST00000411827 WNK3Q9BYP7 1800 aa24.47■■□□□ 1.51
CDC42-204ENST00000411827 GLI3P10071 1580 aa24.46■■□□□ 1.51
CDC42-204ENST00000411827 RXRBP28702 533 aa24.46■■□□□ 1.51
CDC42-204ENST00000411827 PHKG2P15735 406 aa24.45■■□□□ 1.5
CDC42-204ENST00000411827 NKX1-1Q15270 411 aaPredicted RBP24.45■■□□□ 1.5
CDC42-204ENST00000411827 WDR63Q8IWG1 891 aa24.45■■□□□ 1.5
CDC42-204ENST00000411827 PDE3BQ13370 1112 aa24.44■■□□□ 1.5
CDC42-204ENST00000411827 NEUROD2Q15784 382 aa24.44■■□□□ 1.5
CDC42-204ENST00000411827 DCAF5Q96JK2 942 aa24.44■■□□□ 1.5
CDC42-204ENST00000411827 WWC1Q8IX03 1113 aa24.43■■□□□ 1.5
CDC42-204ENST00000411827 THSD7AQ9UPZ6 1657 aa24.43■■□□□ 1.5
CDC42-204ENST00000411827 IL16Q14005 1332 aa24.42■■□□□ 1.5
CDC42-204ENST00000411827 CYP27B1O15528 508 aa24.42■■□□□ 1.5
CDC42-204ENST00000411827 TRIM35Q9UPQ4 493 aa24.42■■□□□ 1.5
CDC42-204ENST00000411827 RRP7AQ9Y3A4 280 aaKnown RBP24.42■■□□□ 1.5
CDC42-204ENST00000411827 A0A0G2JS52 829 aa24.41■■□□□ 1.5
CDC42-204ENST00000411827 MYT1Q01538 1121 aa24.41■■□□□ 1.5
CDC42-204ENST00000411827 SEPT12Q8IYM1 358 aa24.4■■□□□ 1.5
CDC42-204ENST00000411827 DDX54Q8TDD1 881 aaKnown RBP24.4■■□□□ 1.5
CDC42-204ENST00000411827 ZNF521Q96K83 1311 aa24.39■■□□□ 1.5
CDC42-204ENST00000411827 BABAM1Q9NWV8 329 aa24.39■■□□□ 1.49
CDC42-204ENST00000411827 CEMIPQ8WUJ3 1361 aa24.38■■□□□ 1.49
CDC42-204ENST00000411827 LRRC37A3O60309 1634 aa24.37■■□□□ 1.49
CDC42-204ENST00000411827 ERVV-2B6SEH9 535 aa24.37■■□□□ 1.49
CDC42-204ENST00000411827 GOLGA2Q08379 1002 aa24.37■■□□□ 1.49
CDC42-204ENST00000411827 BCL9O00512 1426 aa24.36■■□□□ 1.49
CDC42-204ENST00000411827 YTHDC1Q96MU7 727 aaKnown RBP24.36■■□□□ 1.49
CDC42-204ENST00000411827 RNMTO43148 476 aaKnown RBP24.35■■□□□ 1.49
CDC42-204ENST00000411827 TEFQ10587 303 aa24.35■■□□□ 1.49
CDC42-204ENST00000411827 IL17REQ8NFR9 667 aa24.35■■□□□ 1.49
CDC42-204ENST00000411827 SALL2Q9Y467 1007 aaPredicted RBP24.35■■□□□ 1.49
CDC42-204ENST00000411827 DLG5Q8TDM6 1919 aa24.34■■□□□ 1.49
CDC42-204ENST00000411827 GNAI1P63096 354 aa24.34■■□□□ 1.49
CDC42-204ENST00000411827 MPRIPQ6WCQ1 1025 aa24.34■■□□□ 1.49
CDC42-204ENST00000411827 E9PSI1 815 aa24.33■■□□□ 1.49
CDC42-204ENST00000411827 MYH16Q9H6N6 1097 aa24.33■■□□□ 1.49
CDC42-204ENST00000411827 IFT57Q9NWB7 429 aa24.33■■□□□ 1.49
CDC42-204ENST00000411827 ADAMTS7Q9UKP4 1686 aa24.33■■□□□ 1.49
CDC42-204ENST00000411827 SHANK3Q9BYB0 1731 aa24.32■■□□□ 1.48
CDC42-204ENST00000411827 TAF7Q15545 349 aaPredicted RBP24.32■■□□□ 1.48
CDC42-204ENST00000411827 MCM10Q7L590 875 aa24.32■■□□□ 1.48
CDC42-204ENST00000411827 MARCH10Q8NA82 808 aaPredicted RBP24.32■■□□□ 1.48
CDC42-204ENST00000411827 KRT27Q7Z3Y8 459 aa24.31■■□□□ 1.48
CDC42-204ENST00000411827 CFAP44Q96MT7 982 aa24.31■■□□□ 1.48
CDC42-204ENST00000411827 KDM6AO15550 1401 aaPredicted RBP24.3■■□□□ 1.48
CDC42-204ENST00000411827 SLC52A2Q9HAB3 445 aa24.3■■□□□ 1.48
CDC42-204ENST00000411827 CABP4P57796 275 aa24.29■■□□□ 1.48
CDC42-204ENST00000411827 LGR6Q9HBX8 967 aa24.29■■□□□ 1.48
CDC42-204ENST00000411827 DCTN1Q14203 1278 aa24.28■■□□□ 1.48
CDC42-204ENST00000411827 FAM196AQ6ZSG2 479 aa24.28■■□□□ 1.48
CDC42-204ENST00000411827 SCN11AQ9UI33 1791 aa24.28■■□□□ 1.48
CDC42-204ENST00000411827 MRC1P22897 1456 aa24.27■■□□□ 1.48
CDC42-204ENST00000411827 ZNF853P0CG23 659 aa24.27■■□□□ 1.48
CDC42-204ENST00000411827 UPF1Q92900 1129 aaKnown RBP eCLIP24.27■■□□□ 1.48
CDC42-204ENST00000411827 CHL1O00533 1208 aa24.26■■□□□ 1.47
CDC42-204ENST00000411827 SLFN5Q08AF3 891 aa24.26■■□□□ 1.47
CDC42-204ENST00000411827 THUMPD2Q9BTF0 503 aaKnown RBP24.25■■□□□ 1.47
CDC42-204ENST00000411827 TMOD3Q9NYL9 352 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms