RNA–Protein interactions for RNA: ENST00000411796.6

CCDC196-203, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,132 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-203ENST00000411796 PIK3C2GO75747 1445 aa12.05□□□□□ -0.48
CCDC196-203ENST00000411796 ANKK1Q8NFD2 765 aa12.05□□□□□ -0.48
CCDC196-203ENST00000411796 PUS7Q96PZ0 661 aaKnown RBP12.05□□□□□ -0.48
CCDC196-203ENST00000411796 REPIN1Q9BWE0 567 aaKnown RBP12.05□□□□□ -0.48
CCDC196-203ENST00000411796 DAXXQ9UER7 740 aaPredicted RBP12.05□□□□□ -0.48
CCDC196-203ENST00000411796 RGS17Q9UGC6 210 aaPredicted RBP12.05□□□□□ -0.48
CCDC196-203ENST00000411796 CFAP65Q6ZU64 1925 aaKnown RBP12.05□□□□□ -0.48
CCDC196-203ENST00000411796 NEXMIFQ5QGS0 1516 aa12.05□□□□□ -0.48
CCDC196-203ENST00000411796 SCAF11Q99590 1463 aaKnown RBP12.04□□□□□ -0.48
CCDC196-203ENST00000411796 PDE4DQ08499 809 aa12.04□□□□□ -0.48
CCDC196-203ENST00000411796 ADGRF5Q8IZF2 1346 aa12.04□□□□□ -0.48
CCDC196-203ENST00000411796 MYO3AQ8NEV4 1616 aa12.04□□□□□ -0.48
CCDC196-203ENST00000411796 SOWAHBA6NEL2 793 aa12.03□□□□□ -0.48
CCDC196-203ENST00000411796 BCAMP50895 628 aa12.03□□□□□ -0.48
CCDC196-203ENST00000411796 MMRN1Q13201 1228 aa12.03□□□□□ -0.48
CCDC196-203ENST00000411796 LRCH3Q96II8 777 aa12.03□□□□□ -0.48
CCDC196-203ENST00000411796 TMUB1Q9BVT8 246 aa12.03□□□□□ -0.48
CCDC196-203ENST00000411796 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.03□□□□□ -0.48
CCDC196-203ENST00000411796 ABCC11Q96J66 1382 aa12.03□□□□□ -0.48
CCDC196-203ENST00000411796 KIAA1210Q9ULL0 1709 aa12.03□□□□□ -0.48
CCDC196-203ENST00000411796 SETBP1Q9Y6X0 1596 aa12.02□□□□□ -0.49
CCDC196-203ENST00000411796 TOM1O60784 492 aa12.02□□□□□ -0.49
CCDC196-203ENST00000411796 NBPF8Q3BBV2 869 aa12.02□□□□□ -0.49
CCDC196-203ENST00000411796 DIP2AQ14689 1571 aa12.01□□□□□ -0.49
CCDC196-203ENST00000411796 CLCN1P35523 988 aa12□□□□□ -0.49
CCDC196-203ENST00000411796 EIF4G2P78344 907 aaKnown RBP eCLIP12□□□□□ -0.49
CCDC196-203ENST00000411796 TTLL12Q14166 644 aaPredicted RBP12□□□□□ -0.49
CCDC196-203ENST00000411796 THSD4Q6ZMP0 1018 aa12□□□□□ -0.49
CCDC196-203ENST00000411796 PARP9Q8IXQ6 854 aa12□□□□□ -0.49
CCDC196-203ENST00000411796 RNF166Q96A37 237 aaPredicted RBP12□□□□□ -0.49
CCDC196-203ENST00000411796 GPCPD1Q9NPB8 672 aa12□□□□□ -0.49
CCDC196-203ENST00000411796 NCOA3Q9Y6Q9 1424 aa12□□□□□ -0.49
CCDC196-203ENST00000411796 RALGAPBQ86X10 1494 aa12□□□□□ -0.49
CCDC196-203ENST00000411796 PPLO60437 1756 aa12□□□□□ -0.49
CCDC196-203ENST00000411796 CFAP70Q5T0N1 1121 aa11.99□□□□□ -0.49
CCDC196-203ENST00000411796 CARD11Q9BXL7 1154 aa11.99□□□□□ -0.49
CCDC196-203ENST00000411796 IFT172Q9UG01 1749 aa11.99□□□□□ -0.49
CCDC196-203ENST00000411796 LAMC1P11047 1609 aa11.98□□□□□ -0.49
CCDC196-203ENST00000411796 ROCK2O75116 1388 aaKnown RBP11.98□□□□□ -0.49
CCDC196-203ENST00000411796 KCNA6P17658 529 aa11.98□□□□□ -0.49
CCDC196-203ENST00000411796 SLF2Q8IX21 1173 aa11.98□□□□□ -0.49
CCDC196-203ENST00000411796 NPHP4O75161 1426 aaPredicted RBP11.97□□□□□ -0.49
CCDC196-203ENST00000411796 FAM135BQ49AJ0 1406 aa11.97□□□□□ -0.49
CCDC196-203ENST00000411796 ADAMTS13Q76LX8 1427 aa11.97□□□□□ -0.49
CCDC196-203ENST00000411796 LRPPRCP42704 1394 aaKnown RBP11.97□□□□□ -0.49
CCDC196-203ENST00000411796 EIF3AQ14152 1382 aaKnown RBP11.97□□□□□ -0.49
CCDC196-203ENST00000411796 SBNO2Q9Y2G9 1366 aa11.97□□□□□ -0.49
CCDC196-203ENST00000411796 DDX11L8A8MPP1 907 aa11.97□□□□□ -0.49
CCDC196-203ENST00000411796 RNF40O75150 1001 aa11.97□□□□□ -0.49
CCDC196-203ENST00000411796 CDCA8Q53HL2 280 aa11.97□□□□□ -0.49
CCDC196-203ENST00000411796 HPS5Q9UPZ3 1129 aa11.97□□□□□ -0.49
CCDC196-203ENST00000411796 TECPR2O15040 1411 aa11.96□□□□□ -0.49
CCDC196-203ENST00000411796 SLC10A3P09131 477 aa11.96□□□□□ -0.49
CCDC196-203ENST00000411796 PTPN5P54829 565 aa11.96□□□□□ -0.49
CCDC196-203ENST00000411796 GIGYF2Q6Y7W6 1299 aaKnown RBP11.96□□□□□ -0.49
CCDC196-203ENST00000411796 GPBP1L1Q9HC44 474 aaPredicted RBP11.96□□□□□ -0.49
CCDC196-203ENST00000411796 FAM217BQ9NTX9 383 aaPredicted RBP11.96□□□□□ -0.49
CCDC196-203ENST00000411796 SSTR3P32745 418 aaPredicted RBP11.95□□□□□ -0.5
CCDC196-203ENST00000411796 PPP4CP60510 307 aa11.95□□□□□ -0.5
CCDC196-203ENST00000411796 NBPF1Q3BBV0 1214 aa11.95□□□□□ -0.5
CCDC196-203ENST00000411796 WBP1LQ9NX94 342 aa11.95□□□□□ -0.5
CCDC196-203ENST00000411796 TSR3Q9UJK0 312 aaKnown RBP11.95□□□□□ -0.5
CCDC196-203ENST00000411796 ALKQ9UM73 1620 aa11.95□□□□□ -0.5
CCDC196-203ENST00000411796 POTEAQ6S8J7 498 aa11.94□□□□□ -0.5
CCDC196-203ENST00000411796 DLC1Q96QB1 1528 aa11.94□□□□□ -0.5
CCDC196-203ENST00000411796 SLC4A3P48751 1232 aa11.93□□□□□ -0.5
CCDC196-203ENST00000411796 YTHDC2Q9H6S0 1430 aaKnown RBP11.93□□□□□ -0.5
CCDC196-203ENST00000411796 BRPF1P55201 1214 aaPredicted RBP11.92□□□□□ -0.5
CCDC196-203ENST00000411796 SULF1Q8IWU6 871 aa11.92□□□□□ -0.5
CCDC196-203ENST00000411796 AMOTL2Q9Y2J4 779 aa11.92□□□□□ -0.5
CCDC196-203ENST00000411796 TRPM1Q7Z4N2 1603 aa11.92□□□□□ -0.5
CCDC196-203ENST00000411796 ADGRB1O14514 1584 aa11.92□□□□□ -0.5
CCDC196-203ENST00000411796 MS4A1P11836 297 aa11.91□□□□□ -0.5
CCDC196-203ENST00000411796 NEUROD2Q15784 382 aa11.91□□□□□ -0.5
CCDC196-203ENST00000411796 RDH13Q8NBN7 331 aa11.91□□□□□ -0.5
CCDC196-203ENST00000411796 METP08581 1390 aa11.91□□□□□ -0.5
CCDC196-203ENST00000411796 CD46P15529 392 aa11.9□□□□□ -0.5
CCDC196-203ENST00000411796 PTCH1Q13635 1447 aa11.9□□□□□ -0.5
CCDC196-203ENST00000411796 NUTM2DQ5VT03 806 aaPredicted RBP11.9□□□□□ -0.5
CCDC196-203ENST00000411796 SLC26A8Q96RN1 970 aa11.9□□□□□ -0.5
CCDC196-203ENST00000411796 KDM4CQ9H3R0 1056 aa11.9□□□□□ -0.5
CCDC196-203ENST00000411796 MYO5BQ9ULV0 1848 aa11.9□□□□□ -0.5
CCDC196-203ENST00000411796 SETD1AO15047 1707 aaKnown RBP11.89□□□□□ -0.51
CCDC196-203ENST00000411796 SRCAPQ6ZRS2 3230 aa11.89□□□□□ -0.51
CCDC196-203ENST00000411796 TMF1P82094 1093 aa11.89□□□□□ -0.51
CCDC196-203ENST00000411796 TMEM132EQ6IEE7 984 aa11.89□□□□□ -0.51
CCDC196-203ENST00000411796 USP47Q96K76 1375 aa11.89□□□□□ -0.51
CCDC196-203ENST00000411796 CENPJQ9HC77 1338 aaPredicted RBP11.88□□□□□ -0.51
CCDC196-203ENST00000411796 ST20-MTHFSA0A0A6YYL1 179 aa11.88□□□□□ -0.51
CCDC196-203ENST00000411796 TESK2Q96S53 571 aa11.88□□□□□ -0.51
CCDC196-203ENST00000411796 POGKQ9P215 609 aa11.88□□□□□ -0.51
CCDC196-203ENST00000411796 HCSTQ9UBK5 93 aa11.88□□□□□ -0.51
CCDC196-203ENST00000411796 NRXN3Q9Y4C0 1643 aa11.87□□□□□ -0.51
CCDC196-203ENST00000411796 APLP1P51693 650 aa11.87□□□□□ -0.51
CCDC196-203ENST00000411796 C19orf44Q9H6X5 657 aa11.87□□□□□ -0.51
CCDC196-203ENST00000411796 IQGAP1P46940 1657 aa11.87□□□□□ -0.51
CCDC196-203ENST00000411796 CFHP08603 1231 aa11.86□□□□□ -0.51
CCDC196-203ENST00000411796 HSPA5P11021 654 aaKnown RBP11.86□□□□□ -0.51
CCDC196-203ENST00000411796 GCGRP47871 477 aa11.86□□□□□ -0.51
CCDC196-203ENST00000411796 TRAK1Q9UPV9 953 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms