RNA–Protein interactions for RNA: ENST00000411066.1

RN7SKP259-201, Transcript of RNA, 7SK small nuclear pseudogene 259, humanhuman

BASIC

Gene RN7SKP259, Length 333 nt, Biotype misc RNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP259-201ENST00000411066 GCP02774 474 aa13.68□□□□□ -0.22
RN7SKP259-201ENST00000411066 MCM10Q7L590 875 aa13.68□□□□□ -0.22
RN7SKP259-201ENST00000411066 CADPS2Q86UW7 1296 aa13.68□□□□□ -0.22
RN7SKP259-201ENST00000411066 ARHGEF25Q86VW2 580 aa13.68□□□□□ -0.22
RN7SKP259-201ENST00000411066 BABAM1Q9NWV8 329 aa13.68□□□□□ -0.22
RN7SKP259-201ENST00000411066 PCDHB15Q9Y5E8 787 aa13.68□□□□□ -0.22
RN7SKP259-201ENST00000411066 NCAPD2Q15021 1401 aa13.67□□□□□ -0.22
RN7SKP259-201ENST00000411066 ITPRIPQ8IWB1 547 aa13.67□□□□□ -0.22
RN7SKP259-201ENST00000411066 TMEM57Q8N5G2 664 aa13.67□□□□□ -0.22
RN7SKP259-201ENST00000411066 API5Q9BZZ5 524 aaKnown RBP13.67□□□□□ -0.22
RN7SKP259-201ENST00000411066 SOS1Q07889 1333 aaPredicted RBP13.66□□□□□ -0.22
RN7SKP259-201ENST00000411066 GNAT3A8MTJ3 354 aa13.66□□□□□ -0.22
RN7SKP259-201ENST00000411066 HDAC1Q13547 482 aaPredicted RBP13.66□□□□□ -0.22
RN7SKP259-201ENST00000411066 MAP3K5Q99683 1374 aa13.66□□□□□ -0.22
RN7SKP259-201ENST00000411066 LMTK3Q96Q04 1460 aa13.66□□□□□ -0.22
RN7SKP259-201ENST00000411066 ABCC4O15439 1325 aa13.65□□□□□ -0.22
RN7SKP259-201ENST00000411066 ZBTB40Q9NUA8 1239 aa13.65□□□□□ -0.22
RN7SKP259-201ENST00000411066 MSH6P52701 1360 aa13.65□□□□□ -0.22
RN7SKP259-201ENST00000411066 CAMTA1Q9Y6Y1 1673 aa13.65□□□□□ -0.22
RN7SKP259-201ENST00000411066 STRCQ7RTU9 1775 aa13.64□□□□□ -0.23
RN7SKP259-201ENST00000411066 HSPA2P54652 639 aa13.64□□□□□ -0.23
RN7SKP259-201ENST00000411066 LTV1Q96GA3 475 aaPredicted RBP13.64□□□□□ -0.23
RN7SKP259-201ENST00000411066 NPHP3Q7Z494 1330 aa13.64□□□□□ -0.23
RN7SKP259-201ENST00000411066 XIRP1Q702N8 1843 aaKnown RBP13.63□□□□□ -0.23
RN7SKP259-201ENST00000411066 KDM4FA0A1W2PPD8 638 aa13.63□□□□□ -0.23
RN7SKP259-201ENST00000411066 ELL2O00472 640 aaPredicted RBP13.63□□□□□ -0.23
RN7SKP259-201ENST00000411066 ANP32AP39687 249 aaKnown RBP13.63□□□□□ -0.23
RN7SKP259-201ENST00000411066 FAM161AQ3B820 660 aa13.63□□□□□ -0.23
RN7SKP259-201ENST00000411066 TSPYL4Q9UJ04 414 aa13.63□□□□□ -0.23
RN7SKP259-201ENST00000411066 ABCC6O95255 1503 aa13.63□□□□□ -0.23
RN7SKP259-201ENST00000411066 XPCQ01831 940 aaPredicted RBP13.62□□□□□ -0.23
RN7SKP259-201ENST00000411066 NBPF6Q5VWK0 638 aa13.62□□□□□ -0.23
RN7SKP259-201ENST00000411066 NBPF4Q96M43 638 aa13.62□□□□□ -0.23
RN7SKP259-201ENST00000411066 MED1Q15648 1581 aaPredicted RBP13.62□□□□□ -0.23
RN7SKP259-201ENST00000411066 PTPRCP08575 1304 aa13.62□□□□□ -0.23
RN7SKP259-201ENST00000411066 RGPD2P0DJD1 1756 aa13.61□□□□□ -0.23
RN7SKP259-201ENST00000411066 LMO7Q8WWI1 1683 aa13.61□□□□□ -0.23
RN7SKP259-201ENST00000411066 ZBTB7BO15156 539 aaPredicted RBP13.61□□□□□ -0.23
RN7SKP259-201ENST00000411066 TAF7Q15545 349 aaPredicted RBP13.61□□□□□ -0.23
RN7SKP259-201ENST00000411066 AMOTQ4VCS5 1084 aa13.61□□□□□ -0.23
RN7SKP259-201ENST00000411066 CEMIPQ8WUJ3 1361 aa13.6□□□□□ -0.23
RN7SKP259-201ENST00000411066 CACNA1FO60840 1977 aa13.6□□□□□ -0.23
RN7SKP259-201ENST00000411066 RGS3P49796 1198 aa13.6□□□□□ -0.23
RN7SKP259-201ENST00000411066 PLEKHO1Q53GL0 409 aaPredicted RBP13.6□□□□□ -0.23
RN7SKP259-201ENST00000411066 TNS3Q68CZ2 1445 aa13.6□□□□□ -0.23
RN7SKP259-201ENST00000411066 LMOD2Q6P5Q4 547 aa13.6□□□□□ -0.23
RN7SKP259-201ENST00000411066 SKAP1Q86WV1 359 aa13.6□□□□□ -0.23
RN7SKP259-201ENST00000411066 SMC5Q8IY18 1101 aa13.6□□□□□ -0.23
RN7SKP259-201ENST00000411066 IL17REQ8NFR9 667 aa13.6□□□□□ -0.23
RN7SKP259-201ENST00000411066 ANKRD24Q8TF21 1146 aa13.6□□□□□ -0.23
RN7SKP259-201ENST00000411066 PDZRN3Q9UPQ7 1066 aa13.6□□□□□ -0.23
RN7SKP259-201ENST00000411066 PLEKHG2Q9H7P9 1386 aa13.59□□□□□ -0.23
RN7SKP259-201ENST00000411066 OVOS2A0A0G2JMS6 1433 aa13.59□□□□□ -0.23
RN7SKP259-201ENST00000411066 INTS3Q68E01 1043 aaKnown RBP13.59□□□□□ -0.23
RN7SKP259-201ENST00000411066 PXDNQ92626 1479 aa13.59□□□□□ -0.23
RN7SKP259-201ENST00000411066 VIRMAQ69YN4 1812 aaKnown RBP13.59□□□□□ -0.23
RN7SKP259-201ENST00000411066 ZBTB7CA1YPR0 619 aa13.58□□□□□ -0.24
RN7SKP259-201ENST00000411066 AKAP4Q5JQC9 854 aa13.58□□□□□ -0.24
RN7SKP259-201ENST00000411066 USHBP1Q8N6Y0 703 aa13.58□□□□□ -0.24
RN7SKP259-201ENST00000411066 CHMP4AQ9BY43 222 aa13.58□□□□□ -0.24
RN7SKP259-201ENST00000411066 FAM208AQ9UK61 1670 aaKnown RBP13.57□□□□□ -0.24
RN7SKP259-201ENST00000411066 CRYBG1Q9Y4K1 1723 aa13.57□□□□□ -0.24
RN7SKP259-201ENST00000411066 KRT24Q2M2I5 525 aa13.57□□□□□ -0.24
RN7SKP259-201ENST00000411066 C8orf34Q49A92 452 aa13.57□□□□□ -0.24
RN7SKP259-201ENST00000411066 COL18A1P39060 1754 aa13.57□□□□□ -0.24
RN7SKP259-201ENST00000411066 SPATA31A3Q5VYP0 1347 aa13.57□□□□□ -0.24
RN7SKP259-201ENST00000411066 RGS12O14924 1447 aa13.56□□□□□ -0.24
RN7SKP259-201ENST00000411066 RGPD5Q99666 1765 aa13.56□□□□□ -0.24
RN7SKP259-201ENST00000411066 MSH5O43196 834 aa13.56□□□□□ -0.24
RN7SKP259-201ENST00000411066 CCDC30Q5VVM6 783 aa13.56□□□□□ -0.24
RN7SKP259-201ENST00000411066 LRRC59Q96AG4 307 aaKnown RBP13.56□□□□□ -0.24
RN7SKP259-201ENST00000411066 IPO9Q96P70 1041 aaKnown RBP13.56□□□□□ -0.24
RN7SKP259-201ENST00000411066 MIS18AQ9NYP9 233 aa13.56□□□□□ -0.24
RN7SKP259-201ENST00000411066 SLC4A2P04920 1241 aa13.55□□□□□ -0.24
RN7SKP259-201ENST00000411066 ZNF530Q6P9A1 599 aaPredicted RBP13.55□□□□□ -0.24
RN7SKP259-201ENST00000411066 STK31Q9BXU1 1019 aa13.55□□□□□ -0.24
RN7SKP259-201ENST00000411066 ERBB3P21860 1342 aa13.55□□□□□ -0.24
RN7SKP259-201ENST00000411066 CPDO75976 1380 aa13.55□□□□□ -0.24
RN7SKP259-201ENST00000411066 KDM3BQ7LBC6 1761 aa13.55□□□□□ -0.24
RN7SKP259-201ENST00000411066 HOXB7P09629 217 aa13.54□□□□□ -0.24
RN7SKP259-201ENST00000411066 C1orf141Q5JVX7 400 aa13.54□□□□□ -0.24
RN7SKP259-201ENST00000411066 GCC1Q96CN9 775 aa13.54□□□□□ -0.24
RN7SKP259-201ENST00000411066 AXIN2Q9Y2T1 843 aa13.54□□□□□ -0.24
RN7SKP259-201ENST00000411066 ADAMTS7Q9UKP4 1686 aa13.53□□□□□ -0.24
RN7SKP259-201ENST00000411066 ZC3H6P61129 1189 aaKnown RBP13.53□□□□□ -0.24
RN7SKP259-201ENST00000411066 BRINP3Q76B58 766 aa13.53□□□□□ -0.24
RN7SKP259-201ENST00000411066 RNMTO43148 476 aaKnown RBP13.52□□□□□ -0.25
RN7SKP259-201ENST00000411066 CCT4P50991 539 aaKnown RBP13.52□□□□□ -0.25
RN7SKP259-201ENST00000411066 NUCB1Q02818 461 aa13.52□□□□□ -0.25
RN7SKP259-201ENST00000411066 DDRGK1Q96HY6 314 aa13.52□□□□□ -0.25
RN7SKP259-201ENST00000411066 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.52□□□□□ -0.25
RN7SKP259-201ENST00000411066 SOS2Q07890 1332 aaPredicted RBP13.51□□□□□ -0.25
RN7SKP259-201ENST00000411066 TEFQ10587 303 aa13.51□□□□□ -0.25
RN7SKP259-201ENST00000411066 DDX17Q92841 729 aaKnown RBP13.51□□□□□ -0.25
RN7SKP259-201ENST00000411066 N4BP2Q86UW6 1770 aaPredicted RBP13.5□□□□□ -0.25
RN7SKP259-201ENST00000411066 ZNF335Q9H4Z2 1342 aaPredicted RBP13.5□□□□□ -0.25
RN7SKP259-201ENST00000411066 EIF4A1P60842 406 aaKnown RBP13.5□□□□□ -0.25
RN7SKP259-201ENST00000411066 ERICH6Q7L0X2 663 aa13.5□□□□□ -0.25
RN7SKP259-201ENST00000411066 RPAP2Q8IXW5 612 aaPredicted RBP13.5□□□□□ -0.25
RN7SKP259-201ENST00000411066 LGR6Q9HBX8 967 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms