RNA–Protein interactions for RNA: ENST00000410731.1

RNU4-55P-201, Transcript of RNA, U4 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU4-55P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-55P-201ENST00000410731 SEMA3FQ13275 785 aa7.5□□□□□ -1.21
RNU4-55P-201ENST00000410731 FOXD4L5Q5VV16 416 aaPredicted RBP7.5□□□□□ -1.21
RNU4-55P-201ENST00000410731 RNF135Q8IUD6 432 aa7.5□□□□□ -1.21
RNU4-55P-201ENST00000410731 RNF217Q8TC41 542 aa7.5□□□□□ -1.21
RNU4-55P-201ENST00000410731 SLC16A10Q8TF71 515 aa7.5□□□□□ -1.21
RNU4-55P-201ENST00000410731 OSBPL3Q9H4L5 887 aa7.5□□□□□ -1.21
RNU4-55P-201ENST00000410731 CHIC2Q9UKJ5 165 aa7.5□□□□□ -1.21
RNU4-55P-201ENST00000410731 LCE2CQ5TA81 110 aa7.49□□□□□ -1.21
RNU4-55P-201ENST00000410731 CDCA7Q9BWT1 371 aaPredicted RBP7.49□□□□□ -1.21
RNU4-55P-201ENST00000410731 DOLKQ9UPQ8 538 aa7.49□□□□□ -1.21
RNU4-55P-201ENST00000410731 FIGNL2A6NMB9 653 aa7.48□□□□□ -1.21
RNU4-55P-201ENST00000410731 MYCP01106 439 aaPredicted RBP7.48□□□□□ -1.21
RNU4-55P-201ENST00000410731 ESF1Q9H501 851 aaKnown RBP7.48□□□□□ -1.21
RNU4-55P-201ENST00000410731 GPC1P35052 558 aa7.47□□□□□ -1.21
RNU4-55P-201ENST00000410731 VEGFBP49765 207 aa7.47□□□□□ -1.21
RNU4-55P-201ENST00000410731 RNF144AP50876 292 aaPredicted RBP7.47□□□□□ -1.21
RNU4-55P-201ENST00000410731 PTSQ03393 145 aa7.47□□□□□ -1.21
RNU4-55P-201ENST00000410731 ALG2Q9H553 416 aa7.47□□□□□ -1.21
RNU4-55P-201ENST00000410731 A0A1W2PRU2 124 aa7.46□□□□□ -1.22
RNU4-55P-201ENST00000410731 VSIG8P0DPA2 414 aa7.46□□□□□ -1.22
RNU4-55P-201ENST00000410731 CLN3Q13286 438 aa7.46□□□□□ -1.22
RNU4-55P-201ENST00000410731 MAP7D1Q3KQU3 841 aa7.46□□□□□ -1.22
RNU4-55P-201ENST00000410731 IRF7Q92985 503 aa7.46□□□□□ -1.22
RNU4-55P-201ENST00000410731 MEN1O00255 615 aa7.45□□□□□ -1.22
RNU4-55P-201ENST00000410731 WIPF1O43516 503 aa7.45□□□□□ -1.22
RNU4-55P-201ENST00000410731 PPFIA3O75145 1194 aa7.45□□□□□ -1.22
RNU4-55P-201ENST00000410731 GNRH1P01148 92 aa7.45□□□□□ -1.22
RNU4-55P-201ENST00000410731 USP4Q13107 963 aa7.45□□□□□ -1.22
RNU4-55P-201ENST00000410731 TSGA10IPQ3SY00 556 aa7.45□□□□□ -1.22
RNU4-55P-201ENST00000410731 PLPP7Q8NBV4 271 aa7.45□□□□□ -1.22
RNU4-55P-201ENST00000410731 SIRT1Q96EB6 747 aa7.45□□□□□ -1.22
RNU4-55P-201ENST00000410731 ARHGEF10LQ9HCE6 1279 aa7.45□□□□□ -1.22
RNU4-55P-201ENST00000410731 POM121CA8CG34 1229 aa7.44□□□□□ -1.22
RNU4-55P-201ENST00000410731 OXLD1Q5BKU9 147 aa7.44□□□□□ -1.22
RNU4-55P-201ENST00000410731 LYSMD3Q7Z3D4 306 aa7.44□□□□□ -1.22
RNU4-55P-201ENST00000410731 CLUAP1Q96AJ1 413 aa7.44□□□□□ -1.22
RNU4-55P-201ENST00000410731 ERBB4Q15303 1308 aa7.44□□□□□ -1.22
RNU4-55P-201ENST00000410731 SLC35F4A4IF30 521 aa7.43□□□□□ -1.22
RNU4-55P-201ENST00000410731 PIK3CDO00329 1044 aa7.43□□□□□ -1.22
RNU4-55P-201ENST00000410731 PROSER2Q86WR7 435 aaPredicted RBP7.43□□□□□ -1.22
RNU4-55P-201ENST00000410731 CCDC155Q8N6L0 562 aa7.43□□□□□ -1.22
RNU4-55P-201ENST00000410731 NFATC2IPQ8NCF5 419 aa7.43□□□□□ -1.22
RNU4-55P-201ENST00000410731 NLRP3Q96P20 1036 aa7.43□□□□□ -1.22
RNU4-55P-201ENST00000410731 FNBP4Q8N3X1 1017 aaPredicted RBP7.42□□□□□ -1.22
RNU4-55P-201ENST00000410731 ADAMTS19Q8TE59 1207 aa7.42□□□□□ -1.22
RNU4-55P-201ENST00000410731 RAB6BQ9NRW1 208 aa7.42□□□□□ -1.22
RNU4-55P-201ENST00000410731 SENP3-EIF4A1A0A087X0R7 540 aa7.41□□□□□ -1.22
RNU4-55P-201ENST00000410731 IL2RAP01589 272 aa7.41□□□□□ -1.22
RNU4-55P-201ENST00000410731 ESCO1Q5FWF5 840 aa7.41□□□□□ -1.22
RNU4-55P-201ENST00000410731 ESYT1Q9BSJ8 1104 aa7.41□□□□□ -1.22
RNU4-55P-201ENST00000410731 GRIP2Q9C0E4 1043 aa7.41□□□□□ -1.22
RNU4-55P-201ENST00000410731 A6NJR5 290 aa7.4□□□□□ -1.22
RNU4-55P-201ENST00000410731 SKIP12755 728 aa7.4□□□□□ -1.22
RNU4-55P-201ENST00000410731 GMPRP36959 345 aa7.4□□□□□ -1.22
RNU4-55P-201ENST00000410731 SLC27A3Q5K4L6 730 aa7.4□□□□□ -1.22
RNU4-55P-201ENST00000410731 PRICKLE2Q7Z3G6 844 aa7.4□□□□□ -1.22
RNU4-55P-201ENST00000410731 CNKSR1Q969H4 720 aa7.4□□□□□ -1.22
RNU4-55P-201ENST00000410731 HRH3Q9Y5N1 445 aa7.4□□□□□ -1.22
RNU4-55P-201ENST00000410731 SPATA31C2B4DYI2 1134 aa7.39□□□□□ -1.23
RNU4-55P-201ENST00000410731 LZTS3O60299 673 aaPredicted RBP7.39□□□□□ -1.23
RNU4-55P-201ENST00000410731 ITGA6P23229 1130 aa7.39□□□□□ -1.23
RNU4-55P-201ENST00000410731 NANOS1Q8WY41 292 aaKnown RBP7.39□□□□□ -1.23
RNU4-55P-201ENST00000410731 XAGE2Q96GT9 111 aa7.39□□□□□ -1.23
RNU4-55P-201ENST00000410731 ETNK1Q9HBU6 452 aa7.39□□□□□ -1.23
RNU4-55P-201ENST00000410731 RHOQP17081 205 aa7.38□□□□□ -1.23
RNU4-55P-201ENST00000410731 EML3Q32P44 896 aa7.38□□□□□ -1.23
RNU4-55P-201ENST00000410731 HDGFL1Q5TGJ6 251 aa7.38□□□□□ -1.23
RNU4-55P-201ENST00000410731 USP17L5A8MUK1 530 aa7.37□□□□□ -1.23
RNU4-55P-201ENST00000410731 WASLO00401 505 aaPredicted RBP7.37□□□□□ -1.23
RNU4-55P-201ENST00000410731 SCNN1DP51172 638 aa7.37□□□□□ -1.23
RNU4-55P-201ENST00000410731 INSM1Q01101 510 aaPredicted RBP7.37□□□□□ -1.23
RNU4-55P-201ENST00000410731 CENPCQ03188 943 aa7.37□□□□□ -1.23
RNU4-55P-201ENST00000410731 WDR44Q5JSH3 913 aa7.37□□□□□ -1.23
RNU4-55P-201ENST00000410731 NBPF10Q6P3W6 841 aaKnown RBP7.37□□□□□ -1.23
RNU4-55P-201ENST00000410731 NBPF15Q8N660 670 aa7.37□□□□□ -1.23
RNU4-55P-201ENST00000410731 UCN2Q96RP3 112 aa7.37□□□□□ -1.23
RNU4-55P-201ENST00000410731 FHDC1Q9C0D6 1143 aaPredicted RBP7.37□□□□□ -1.23
RNU4-55P-201ENST00000410731 STAU1O95793 577 aaKnown RBP7.36□□□□□ -1.23
RNU4-55P-201ENST00000410731 GDF10P55107 478 aa7.36□□□□□ -1.23
RNU4-55P-201ENST00000410731 POU4F2Q12837 409 aa7.36□□□□□ -1.23
RNU4-55P-201ENST00000410731 NCOA4Q13772 614 aa7.36□□□□□ -1.23
RNU4-55P-201ENST00000410731 TAS1R3Q7RTX0 852 aa7.36□□□□□ -1.23
RNU4-55P-201ENST00000410731 PLEKHM2Q8IWE5 1019 aa7.36□□□□□ -1.23
RNU4-55P-201ENST00000410731 GLMNQ92990 594 aa7.36□□□□□ -1.23
RNU4-55P-201ENST00000410731 ZSCAN10Q96SZ4 725 aaPredicted RBP7.36□□□□□ -1.23
RNU4-55P-201ENST00000410731 NOD1Q9Y239 953 aa7.36□□□□□ -1.23
RNU4-55P-201ENST00000410731 DYRK1BQ9Y463 629 aa7.36□□□□□ -1.23
RNU4-55P-201ENST00000410731 INHAP05111 366 aa7.35□□□□□ -1.23
RNU4-55P-201ENST00000410731 PCDHGA11Q9Y5H2 935 aa7.35□□□□□ -1.23
RNU4-55P-201ENST00000410731 USP17L3A6NCW0 530 aa7.34□□□□□ -1.23
RNU4-55P-201ENST00000410731 USP17L4A6NCW7 530 aa7.34□□□□□ -1.23
RNU4-55P-201ENST00000410731 ATP9BO43861 1147 aa7.34□□□□□ -1.23
RNU4-55P-201ENST00000410731 GTF2E1P29083 439 aaPredicted RBP7.34□□□□□ -1.23
RNU4-55P-201ENST00000410731 TLR1Q15399 786 aa7.34□□□□□ -1.23
RNU4-55P-201ENST00000410731 USP17L2Q6R6M4 530 aa7.34□□□□□ -1.23
RNU4-55P-201ENST00000410731 TBC1D9Q6ZT07 1266 aa7.34□□□□□ -1.23
RNU4-55P-201ENST00000410731 USP17L1Q7RTZ2 530 aa7.34□□□□□ -1.23
RNU4-55P-201ENST00000410731 CDC14CA4D256 554 aa7.33□□□□□ -1.24
RNU4-55P-201ENST00000410731 TMEM229AB2RXF0 380 aa7.33□□□□□ -1.24
RNU4-55P-201ENST00000410731 GTF2IP78347 998 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms