RNA–Protein interactions for RNA: ENST00000409967.6

ITGB6-204, Transcript of integrin subunit beta 6, humanhuman

TSL 3 BASIC

Gene ITGB6, Length 2,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6-204ENST00000409967 TOM1O60784 492 aa15.11■□□□□ 0.01
ITGB6-204ENST00000409967 HAP1P54257 671 aaPredicted RBP15.11■□□□□ 0.01
ITGB6-204ENST00000409967 ZNF521Q96K83 1311 aa15.11■□□□□ 0.01
ITGB6-204ENST00000409967 COL16A1Q07092 1604 aaPredicted RBP15.1■□□□□ 0.01
ITGB6-204ENST00000409967 RNF123Q5XPI4 1314 aa15.09■□□□□ 0.01
ITGB6-204ENST00000409967 IGSF1Q8N6C5 1336 aa15.09■□□□□ 0.01
ITGB6-204ENST00000409967 PDE4AP27815 886 aa15.09■□□□□ 0.01
ITGB6-204ENST00000409967 TMPOP42166 694 aaKnown RBP15.09■□□□□ 0.01
ITGB6-204ENST00000409967 WWC1Q8IX03 1113 aa15.09■□□□□ 0.01
ITGB6-204ENST00000409967 LRRC59Q96AG4 307 aaKnown RBP15.09■□□□□ 0.01
ITGB6-204ENST00000409967 BACH2Q9BYV9 841 aa15.09■□□□□ 0.01
ITGB6-204ENST00000409967 MS4A1P11836 297 aa15.08■□□□□ 0
ITGB6-204ENST00000409967 RGS3P49796 1198 aa15.08■□□□□ 0
ITGB6-204ENST00000409967 ANKRD24Q8TF21 1146 aa15.08■□□□□ 0
ITGB6-204ENST00000409967 RIPK4P57078 832 aa15.08■□□□□ 0
ITGB6-204ENST00000409967 SPINK5Q9NQ38 1064 aaPredicted RBP15.08■□□□□ 0
ITGB6-204ENST00000409967 GOLGA2Q08379 1002 aa15.07■□□□□ 0
ITGB6-204ENST00000409967 KDRP35968 1356 aa15.07■□□□□ 0
ITGB6-204ENST00000409967 PDE3BQ13370 1112 aa15.06■□□□□ 0
ITGB6-204ENST00000409967 L1TD1Q5T7N2 865 aaKnown RBP15.06■□□□□ 0
ITGB6-204ENST00000409967 NBPF6Q5VWK0 638 aa15.06■□□□□ 0
ITGB6-204ENST00000409967 NBPF4Q96M43 638 aa15.06■□□□□ 0
ITGB6-204ENST00000409967 CERKQ8TCT0 537 aa15.06■□□□□ 0
ITGB6-204ENST00000409967 PRDM11Q9NQV5 511 aa15.06■□□□□ 0
ITGB6-204ENST00000409967 COL22A1Q8NFW1 1626 aaPredicted RBP15.06■□□□□ 0
ITGB6-204ENST00000409967 CPDO75976 1380 aa15.06■□□□□ 0
ITGB6-204ENST00000409967 NFE2L2Q16236 605 aa15.05■□□□□ 0
ITGB6-204ENST00000409967 TRIM35Q9UPQ4 493 aa15.05■□□□□ 0
ITGB6-204ENST00000409967 PHF23Q9BUL5 403 aaPredicted RBP15.05■□□□□ -0
ITGB6-204ENST00000409967 CAMTA1Q9Y6Y1 1673 aa15.05■□□□□ -0
ITGB6-204ENST00000409967 ERBB3P21860 1342 aa15.05■□□□□ -0
ITGB6-204ENST00000409967 LMO7Q8WWI1 1683 aa15.04■□□□□ -0
ITGB6-204ENST00000409967 NGEFQ8N5V2 710 aa15.04■□□□□ -0
ITGB6-204ENST00000409967 TPM2P07951 284 aa15.03■□□□□ -0
ITGB6-204ENST00000409967 CCDC27Q2M243 656 aa15.03■□□□□ -0
ITGB6-204ENST00000409967 THUMPD2Q9BTF0 503 aaKnown RBP15.03■□□□□ -0
ITGB6-204ENST00000409967 ABCC6O95255 1503 aa15.03■□□□□ -0
ITGB6-204ENST00000409967 CSB-PGBD3P0DP91 1061 aa15.03■□□□□ -0
ITGB6-204ENST00000409967 SLFN5Q08AF3 891 aa15.03■□□□□ -0
ITGB6-204ENST00000409967 NAP1L2Q9ULW6 460 aaPredicted RBP15.03■□□□□ -0
ITGB6-204ENST00000409967 FAM208AQ9UK61 1670 aaKnown RBP15.03■□□□□ -0
ITGB6-204ENST00000409967 FAM83GA6ND36 823 aa15.02□□□□□ -0.01
ITGB6-204ENST00000409967 DUSP27Q5VZP5 1158 aa15.02□□□□□ -0.01
ITGB6-204ENST00000409967 BBXQ8WY36 941 aaPredicted RBP15.01□□□□□ -0.01
ITGB6-204ENST00000409967 MTHFSDQ2M296 383 aaKnown RBP15.01□□□□□ -0.01
ITGB6-204ENST00000409967 NLRP2Q9NX02 1062 aa15.01□□□□□ -0.01
ITGB6-204ENST00000409967 E9PSI1 815 aa15□□□□□ -0.01
ITGB6-204ENST00000409967 DCTN1Q14203 1278 aa15□□□□□ -0.01
ITGB6-204ENST00000409967 COL5A2P05997 1499 aaPredicted RBP14.99□□□□□ -0.01
ITGB6-204ENST00000409967 WDR63Q8IWG1 891 aa14.99□□□□□ -0.01
ITGB6-204ENST00000409967 FRAT2O75474 233 aaPredicted RBP14.99□□□□□ -0.01
ITGB6-204ENST00000409967 GTF2E1P29083 439 aaPredicted RBP14.99□□□□□ -0.01
ITGB6-204ENST00000409967 NCAPD2Q15021 1401 aa14.98□□□□□ -0.01
ITGB6-204ENST00000409967 NUTM2BA6NNL0 878 aaPredicted RBP14.98□□□□□ -0.01
ITGB6-204ENST00000409967 NUTM2EB1AL46 878 aaPredicted RBP14.98□□□□□ -0.01
ITGB6-204ENST00000409967 NUTM2AQ8IVF1 878 aaPredicted RBP14.98□□□□□ -0.01
ITGB6-204ENST00000409967 TSR2Q969E8 191 aaKnown RBP14.98□□□□□ -0.01
ITGB6-204ENST00000409967 STRN4Q9NRL3 753 aa14.98□□□□□ -0.01
ITGB6-204ENST00000409967 COL14A1Q05707 1796 aaKnown RBP14.98□□□□□ -0.01
ITGB6-204ENST00000409967 ADAMTS2O95450 1211 aa14.97□□□□□ -0.01
ITGB6-204ENST00000409967 NCBP3Q53F19 620 aaKnown RBP14.97□□□□□ -0.01
ITGB6-204ENST00000409967 MCM10Q7L590 875 aa14.97□□□□□ -0.01
ITGB6-204ENST00000409967 TRMT2AQ8IZ69 625 aaKnown RBP14.97□□□□□ -0.01
ITGB6-204ENST00000409967 PLCH1Q4KWH8 1693 aa14.97□□□□□ -0.01
ITGB6-204ENST00000409967 KLHL34Q8N239 644 aa14.97□□□□□ -0.01
ITGB6-204ENST00000409967 VIRMAQ69YN4 1812 aaKnown RBP14.97□□□□□ -0.01
ITGB6-204ENST00000409967 RCAN3Q9UKA8 241 aa14.96□□□□□ -0.01
ITGB6-204ENST00000409967 LMOD3Q0VAK6 560 aa14.95□□□□□ -0.02
ITGB6-204ENST00000409967 GAS2L2Q8NHY3 880 aa14.95□□□□□ -0.02
ITGB6-204ENST00000409967 IPO4Q8TEX9 1081 aaKnown RBP14.95□□□□□ -0.02
ITGB6-204ENST00000409967 BTG4Q9NY30 223 aa14.95□□□□□ -0.02
ITGB6-204ENST00000409967 MEGF6O75095 1541 aa14.95□□□□□ -0.02
ITGB6-204ENST00000409967 WDR17Q8IZU2 1322 aa14.95□□□□□ -0.02
ITGB6-204ENST00000409967 TOM1L2Q6ZVM7 507 aa14.95□□□□□ -0.02
ITGB6-204ENST00000409967 MYH16Q9H6N6 1097 aa14.94□□□□□ -0.02
ITGB6-204ENST00000409967 CANXP27824 592 aaKnown RBP14.94□□□□□ -0.02
ITGB6-204ENST00000409967 EVA1CP58658 441 aa14.94□□□□□ -0.02
ITGB6-204ENST00000409967 LARP1Q6PKG0 1096 aaKnown RBP14.94□□□□□ -0.02
ITGB6-204ENST00000409967 SMAP1Q8IYB5 467 aaPredicted RBP14.94□□□□□ -0.02
ITGB6-204ENST00000409967 MAP3K5Q99683 1374 aa14.93□□□□□ -0.02
ITGB6-204ENST00000409967 NCLP19338 710 aaKnown RBP14.93□□□□□ -0.02
ITGB6-204ENST00000409967 RAPGEF4Q8WZA2 1011 aa14.92□□□□□ -0.02
ITGB6-204ENST00000409967 RTF1Q92541 710 aaKnown RBP14.92□□□□□ -0.02
ITGB6-204ENST00000409967 LRRC37A3O60309 1634 aa14.92□□□□□ -0.02
ITGB6-204ENST00000409967 IL16Q14005 1332 aa14.92□□□□□ -0.02
ITGB6-204ENST00000409967 PARP4Q9UKK3 1724 aaKnown RBP14.92□□□□□ -0.02
ITGB6-204ENST00000409967 ZNF530Q6P9A1 599 aaPredicted RBP14.92□□□□□ -0.02
ITGB6-204ENST00000409967 GNAT3A8MTJ3 354 aa14.91□□□□□ -0.02
ITGB6-204ENST00000409967 NRAPQ86VF7 1730 aa14.91□□□□□ -0.02
ITGB6-204ENST00000409967 HSPA1LP34931 641 aa14.91□□□□□ -0.02
ITGB6-204ENST00000409967 MAP7D2Q96T17 732 aa14.91□□□□□ -0.02
ITGB6-204ENST00000409967 JCADQ9P266 1359 aa14.9□□□□□ -0.02
ITGB6-204ENST00000409967 PKD1L3Q7Z443 1732 aa14.9□□□□□ -0.02
ITGB6-204ENST00000409967 EXOSC9Q06265 439 aaKnown RBP14.9□□□□□ -0.02
ITGB6-204ENST00000409967 PLEKHO1Q53GL0 409 aaPredicted RBP14.9□□□□□ -0.02
ITGB6-204ENST00000409967 CHMP4BQ9H444 224 aaKnown RBP14.9□□□□□ -0.02
ITGB6-204ENST00000409967 TATP17735 454 aaPredicted RBP14.9□□□□□ -0.02
ITGB6-204ENST00000409967 MBIPQ9NS73 344 aa14.89□□□□□ -0.03
ITGB6-204ENST00000409967 IFT57Q9NWB7 429 aa14.89□□□□□ -0.03
ITGB6-204ENST00000409967 CRB1P82279 1406 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms