RNA–Protein interactions for RNA: ENST00000409777.5

CUL3-204, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 3,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-204ENST00000409777 MON2Q7Z3U7 1717 aa3.99□□□□□ -1.77
CUL3-204ENST00000409777 LRRC7Q96NW7 1537 aa3.99□□□□□ -1.77
CUL3-204ENST00000409777 DLC1Q96QB1 1528 aa3.99□□□□□ -1.77
CUL3-204ENST00000409777 NPATQ14207 1427 aa3.99□□□□□ -1.77
CUL3-204ENST00000409777 RAD21O60216 631 aa3.99□□□□□ -1.77
CUL3-204ENST00000409777 C14orf93Q9H972 538 aaKnown RBP3.99□□□□□ -1.77
CUL3-204ENST00000409777 CHMP5Q9NZZ3 219 aa3.99□□□□□ -1.77
CUL3-204ENST00000409777 RPGRIP1LQ68CZ1 1315 aa3.98□□□□□ -1.77
CUL3-204ENST00000409777 ADGRF5Q8IZF2 1346 aa3.98□□□□□ -1.77
CUL3-204ENST00000409777 KIF16BQ96L93 1317 aa3.98□□□□□ -1.77
CUL3-204ENST00000409777 PREX1Q8TCU6 1659 aa3.98□□□□□ -1.77
CUL3-204ENST00000409777 AKAP12Q02952 1782 aa3.98□□□□□ -1.77
CUL3-204ENST00000409777 RGS3P49796 1198 aa3.98□□□□□ -1.77
CUL3-204ENST00000409777 MRE11P49959 708 aa3.98□□□□□ -1.77
CUL3-204ENST00000409777 BARGINQ6ZT62 677 aa3.98□□□□□ -1.77
CUL3-204ENST00000409777 CCDC146Q8IYE0 955 aa3.98□□□□□ -1.77
CUL3-204ENST00000409777 KIF2CQ99661 725 aa3.98□□□□□ -1.77
CUL3-204ENST00000409777 RGPD1P0DJD0 1748 aa3.98□□□□□ -1.77
CUL3-204ENST00000409777 RICTORQ6R327 1708 aa3.98□□□□□ -1.77
CUL3-204ENST00000409777 TERF1P54274 439 aa3.98□□□□□ -1.77
CUL3-204ENST00000409777 FOXD4L5Q5VV16 416 aaPredicted RBP3.98□□□□□ -1.77
CUL3-204ENST00000409777 FOXD4L4Q8WXT5 416 aaPredicted RBP3.98□□□□□ -1.77
CUL3-204ENST00000409777 PPP1R9BQ96SB3 815 aa3.98□□□□□ -1.77
CUL3-204ENST00000409777 RWDD1Q9H446 243 aaPredicted RBP3.98□□□□□ -1.77
CUL3-204ENST00000409777 COG6Q9Y2V7 657 aa3.98□□□□□ -1.77
CUL3-204ENST00000409777 KIF24Q5T7B8 1368 aa3.98□□□□□ -1.77
CUL3-204ENST00000409777 FAM135BQ49AJ0 1406 aa3.98□□□□□ -1.77
CUL3-204ENST00000409777 ITSN1Q15811 1721 aa3.97□□□□□ -1.77
CUL3-204ENST00000409777 NALCNQ8IZF0 1738 aa3.97□□□□□ -1.77
CUL3-204ENST00000409777 DDX11L8A8MPP1 907 aa3.97□□□□□ -1.77
CUL3-204ENST00000409777 PLCG2P16885 1265 aa3.97□□□□□ -1.77
CUL3-204ENST00000409777 CNGB1Q14028 1251 aaPredicted RBP3.97□□□□□ -1.77
CUL3-204ENST00000409777 CYB5RLQ6IPT4 315 aa3.97□□□□□ -1.77
CUL3-204ENST00000409777 TRIM35Q9UPQ4 493 aa3.97□□□□□ -1.77
CUL3-204ENST00000409777 MTMR7Q9Y216 660 aa3.97□□□□□ -1.77
CUL3-204ENST00000409777 DIP2CQ9Y2E4 1556 aa3.97□□□□□ -1.77
CUL3-204ENST00000409777 SPAG9O60271 1321 aaKnown RBP3.97□□□□□ -1.77
CUL3-204ENST00000409777 POGZQ7Z3K3 1410 aa3.97□□□□□ -1.77
CUL3-204ENST00000409777 GOLGA6L3A6NEY3 463 aa3.97□□□□□ -1.77
CUL3-204ENST00000409777 RRP9O43818 475 aaKnown RBP3.97□□□□□ -1.77
CUL3-204ENST00000409777 PTMSP20962 102 aa3.97□□□□□ -1.77
CUL3-204ENST00000409777 NUCB1Q02818 461 aa3.97□□□□□ -1.77
CUL3-204ENST00000409777 RAB3GAP1Q15042 981 aa3.97□□□□□ -1.77
CUL3-204ENST00000409777 RBM26Q5T8P6 1007 aaKnown RBP3.97□□□□□ -1.77
CUL3-204ENST00000409777 TCP11L2Q8N4U5 519 aa3.97□□□□□ -1.77
CUL3-204ENST00000409777 ZBTB40Q9NUA8 1239 aa3.97□□□□□ -1.77
CUL3-204ENST00000409777 C3P01024 1663 aa3.97□□□□□ -1.77
CUL3-204ENST00000409777 CRYBG1Q9Y4K1 1723 aa3.97□□□□□ -1.77
CUL3-204ENST00000409777 ARHGEF40Q8TER5 1519 aa3.97□□□□□ -1.77
CUL3-204ENST00000409777 SMYD5Q6GMV2 418 aa3.97□□□□□ -1.77
CUL3-204ENST00000409777 AEBP1Q8IUX7 1158 aa3.97□□□□□ -1.77
CUL3-204ENST00000409777 TNNQ9UQP3 1299 aa3.97□□□□□ -1.77
CUL3-204ENST00000409777 ERBB4Q15303 1308 aa3.97□□□□□ -1.77
CUL3-204ENST00000409777 CDK12Q9NYV4 1490 aaPredicted RBP3.96□□□□□ -1.77
CUL3-204ENST00000409777 TRAK2O60296 914 aa3.96□□□□□ -1.78
CUL3-204ENST00000409777 ALDH1L2Q3SY69 923 aa3.96□□□□□ -1.78
CUL3-204ENST00000409777 CFAP70Q5T0N1 1121 aa3.96□□□□□ -1.78
CUL3-204ENST00000409777 C22orf23Q9BZE7 217 aa3.96□□□□□ -1.78
CUL3-204ENST00000409777 MYH16Q9H6N6 1097 aa3.96□□□□□ -1.78
CUL3-204ENST00000409777 LRRC37A3O60309 1634 aa3.96□□□□□ -1.78
CUL3-204ENST00000409777 TOPAZ1Q8N9V7 1692 aa3.96□□□□□ -1.78
CUL3-204ENST00000409777 CYP2E1P05181 493 aaPredicted RBP3.96□□□□□ -1.78
CUL3-204ENST00000409777 BMP2KLQ5H9B9 411 aa3.96□□□□□ -1.78
CUL3-204ENST00000409777 ZKSCAN2Q63HK3 967 aa3.96□□□□□ -1.78
CUL3-204ENST00000409777 RGS22Q8NE09 1264 aa3.96□□□□□ -1.78
CUL3-204ENST00000409777 IL17RAQ96F46 866 aa3.96□□□□□ -1.78
CUL3-204ENST00000409777 TMEM106CQ9BVX2 250 aa3.96□□□□□ -1.78
CUL3-204ENST00000409777 GRPEL1Q9HAV7 217 aa3.96□□□□□ -1.78
CUL3-204ENST00000409777 ATP7BP35670 1465 aa3.96□□□□□ -1.78
CUL3-204ENST00000409777 PLEKHG3A1L390 1219 aa3.95□□□□□ -1.78
CUL3-204ENST00000409777 TRIM27P14373 513 aa3.95□□□□□ -1.78
CUL3-204ENST00000409777 SKOR2Q2VWA4 1001 aaPredicted RBP3.95□□□□□ -1.78
CUL3-204ENST00000409777 HS1BP3Q53T59 392 aa3.95□□□□□ -1.78
CUL3-204ENST00000409777 USP54Q70EL1 1684 aa3.95□□□□□ -1.78
CUL3-204ENST00000409777 DDX27Q96GQ7 796 aaKnown RBP3.95□□□□□ -1.78
CUL3-204ENST00000409777 PANK2Q9BZ23 570 aa3.95□□□□□ -1.78
CUL3-204ENST00000409777 UPF2Q9HAU5 1272 aaKnown RBP3.95□□□□□ -1.78
CUL3-204ENST00000409777 NRXN3Q9Y4C0 1643 aa3.95□□□□□ -1.78
CUL3-204ENST00000409777 CPSF1Q10570 1443 aaKnown RBP3.95□□□□□ -1.78
CUL3-204ENST00000409777 ONECUT3O60422 494 aaPredicted RBP3.95□□□□□ -1.78
CUL3-204ENST00000409777 PDE4DQ08499 809 aa3.95□□□□□ -1.78
CUL3-204ENST00000409777 DZIP1LQ8IYY4 767 aaKnown RBP3.95□□□□□ -1.78
CUL3-204ENST00000409777 ARHGAP45Q92619 1136 aa3.95□□□□□ -1.78
CUL3-204ENST00000409777 LARP6Q9BRS8 491 aaKnown RBP3.95□□□□□ -1.78
CUL3-204ENST00000409777 DDX19BQ9UMR2 479 aa3.95□□□□□ -1.78
CUL3-204ENST00000409777 MAP2P11137 1827 aaKnown RBP3.95□□□□□ -1.78
CUL3-204ENST00000409777 ABCC4O15439 1325 aa3.95□□□□□ -1.78
CUL3-204ENST00000409777 TPM2P07951 284 aa3.95□□□□□ -1.78
CUL3-204ENST00000409777 ATF7IPQ6VMQ6 1270 aa3.95□□□□□ -1.78
CUL3-204ENST00000409777 PDLIM2Q96JY6 352 aa3.95□□□□□ -1.78
CUL3-204ENST00000409777 AK7Q96M32 723 aa3.95□□□□□ -1.78
CUL3-204ENST00000409777 COLQQ9Y215 455 aaPredicted RBP3.95□□□□□ -1.78
CUL3-204ENST00000409777 RGS12O14924 1447 aa3.94□□□□□ -1.78
CUL3-204ENST00000409777 YTHDC2Q9H6S0 1430 aaKnown RBP3.94□□□□□ -1.78
CUL3-204ENST00000409777 A0A1W2PP64 1363 aa3.94□□□□□ -1.78
CUL3-204ENST00000409777 XRN1Q8IZH2 1706 aaKnown RBP3.94□□□□□ -1.78
CUL3-204ENST00000409777 ESPNB1AK53 854 aa3.94□□□□□ -1.78
CUL3-204ENST00000409777 TRIM66O15016 1216 aa3.94□□□□□ -1.78
CUL3-204ENST00000409777 ZNF445P59923 1031 aa3.94□□□□□ -1.78
CUL3-204ENST00000409777 GAS2L3Q86XJ1 694 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms