RNA–Protein interactions for RNA: ENST00000409758.1

AP001341.1-201, humanhuman

TSL 3 BASIC

Gene AP001341.1, Length 763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001341.1-201ENST00000409758 USP54Q70EL1 1684 aa16.78■□□□□ 0.28
AP001341.1-201ENST00000409758 SBF2Q86WG5 1849 aa16.78■□□□□ 0.28
AP001341.1-201ENST00000409758 PPM1GO15355 546 aaPredicted RBP16.78■□□□□ 0.28
AP001341.1-201ENST00000409758 ZNF827Q17R98 1081 aa16.78■□□□□ 0.28
AP001341.1-201ENST00000409758 TIMELESSQ9UNS1 1208 aa16.78■□□□□ 0.28
AP001341.1-201ENST00000409758 CGNL1Q0VF96 1302 aa16.77■□□□□ 0.28
AP001341.1-201ENST00000409758 POLD1P28340 1107 aa16.77■□□□□ 0.28
AP001341.1-201ENST00000409758 HSP90AB2PQ58FF8 381 aa16.77■□□□□ 0.28
AP001341.1-201ENST00000409758 KLHL34Q8N239 644 aa16.77■□□□□ 0.28
AP001341.1-201ENST00000409758 SYT17Q9BSW7 474 aa16.77■□□□□ 0.28
AP001341.1-201ENST00000409758 LTN1O94822 1766 aa16.77■□□□□ 0.27
AP001341.1-201ENST00000409758 KCNQ4P56696 695 aa16.76■□□□□ 0.27
AP001341.1-201ENST00000409758 CCNL1Q9UK58 526 aaPredicted RBP16.76■□□□□ 0.27
AP001341.1-201ENST00000409758 NHSQ6T4R5 1651 aa16.75■□□□□ 0.27
AP001341.1-201ENST00000409758 SLC16A10Q8TF71 515 aa16.75■□□□□ 0.27
AP001341.1-201ENST00000409758 AKT1S1Q96B36 256 aa16.75■□□□□ 0.27
AP001341.1-201ENST00000409758 INSRP06213 1382 aa16.74■□□□□ 0.27
AP001341.1-201ENST00000409758 FLT4P35916 1363 aa16.74■□□□□ 0.27
AP001341.1-201ENST00000409758 CARD14Q9BXL6 1004 aa16.73■□□□□ 0.27
AP001341.1-201ENST00000409758 MEGF6O75095 1541 aa16.72■□□□□ 0.27
AP001341.1-201ENST00000409758 HMGB2P26583 209 aaKnown RBP16.72■□□□□ 0.27
AP001341.1-201ENST00000409758 SGIP1Q9BQI5 828 aa16.72■□□□□ 0.27
AP001341.1-201ENST00000409758 PCDH11XQ9BZA7 1347 aa16.71■□□□□ 0.27
AP001341.1-201ENST00000409758 PCDH11YQ9BZA8 1340 aa16.71■□□□□ 0.27
AP001341.1-201ENST00000409758 NSD3Q9BZ95 1437 aa16.71■□□□□ 0.27
AP001341.1-201ENST00000409758 GPR162Q16538 588 aa16.71■□□□□ 0.27
AP001341.1-201ENST00000409758 MPRIPQ6WCQ1 1025 aa16.71■□□□□ 0.27
AP001341.1-201ENST00000409758 EMILIN1Q9Y6C2 1016 aa16.71■□□□□ 0.27
AP001341.1-201ENST00000409758 KIF24Q5T7B8 1368 aa16.71■□□□□ 0.27
AP001341.1-201ENST00000409758 CASZ1Q86V15 1759 aa16.71■□□□□ 0.27
AP001341.1-201ENST00000409758 PELP1Q8IZL8 1130 aaKnown RBP16.7■□□□□ 0.26
AP001341.1-201ENST00000409758 PNPLA7Q6ZV29 1317 aa16.7■□□□□ 0.26
AP001341.1-201ENST00000409758 SPG7Q9UQ90 795 aa16.69■□□□□ 0.26
AP001341.1-201ENST00000409758 CLSPNQ9HAW4 1339 aa16.69■□□□□ 0.26
AP001341.1-201ENST00000409758 TNNT2P45379 298 aaPredicted RBP16.68■□□□□ 0.26
AP001341.1-201ENST00000409758 FAM208AQ9UK61 1670 aaKnown RBP16.68■□□□□ 0.26
AP001341.1-201ENST00000409758 SMARCC1Q92922 1105 aaPredicted RBP16.67■□□□□ 0.26
AP001341.1-201ENST00000409758 BTAF1O14981 1849 aa16.67■□□□□ 0.26
AP001341.1-201ENST00000409758 NSD2O96028 1365 aa16.66■□□□□ 0.26
AP001341.1-201ENST00000409758 MYOM1P52179 1685 aa16.66■□□□□ 0.26
AP001341.1-201ENST00000409758 CYP27B1O15528 508 aa16.65■□□□□ 0.26
AP001341.1-201ENST00000409758 EIF4G2P78344 907 aaKnown RBP eCLIP16.65■□□□□ 0.26
AP001341.1-201ENST00000409758 CCER1Q8TC90 406 aaPredicted RBP16.65■□□□□ 0.26
AP001341.1-201ENST00000409758 WASHC2AQ641Q2 1341 aa16.65■□□□□ 0.26
AP001341.1-201ENST00000409758 FLAD1Q8NFF5 587 aa16.64■□□□□ 0.25
AP001341.1-201ENST00000409758 PALLDQ8WX93 1383 aa16.64■□□□□ 0.25
AP001341.1-201ENST00000409758 MAP3K5Q99683 1374 aa16.64■□□□□ 0.25
AP001341.1-201ENST00000409758 MSL1Q68DK7 614 aa16.63■□□□□ 0.25
AP001341.1-201ENST00000409758 COL23A1Q86Y22 540 aaPredicted RBP16.63■□□□□ 0.25
AP001341.1-201ENST00000409758 AK7Q96M32 723 aa16.63■□□□□ 0.25
AP001341.1-201ENST00000409758 PAPPAQ13219 1627 aa16.63■□□□□ 0.25
AP001341.1-201ENST00000409758 KAT6BQ8WYB5 2073 aa16.62■□□□□ 0.25
AP001341.1-201ENST00000409758 ZNF784Q8NCA9 323 aaPredicted RBP16.62■□□□□ 0.25
AP001341.1-201ENST00000409758 EYA1Q99502 592 aa16.62■□□□□ 0.25
AP001341.1-201ENST00000409758 POLKQ9UBT6 870 aa16.62■□□□□ 0.25
AP001341.1-201ENST00000409758 PIGBQ92521 554 aa16.61■□□□□ 0.25
AP001341.1-201ENST00000409758 TMOD3Q9NYL9 352 aa16.61■□□□□ 0.25
AP001341.1-201ENST00000409758 HSPA5P11021 654 aaKnown RBP16.6■□□□□ 0.25
AP001341.1-201ENST00000409758 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.6■□□□□ 0.25
AP001341.1-201ENST00000409758 IFNL2Q8IZJ0 200 aa16.59■□□□□ 0.25
AP001341.1-201ENST00000409758 PANK3Q9H999 370 aa16.59■□□□□ 0.25
AP001341.1-201ENST00000409758 DOT1LQ8TEK3 1739 aa16.59■□□□□ 0.25
AP001341.1-201ENST00000409758 PHF14O94880 888 aa16.58■□□□□ 0.24
AP001341.1-201ENST00000409758 NKX1-1Q15270 411 aaPredicted RBP16.58■□□□□ 0.24
AP001341.1-201ENST00000409758 NLGN2Q8NFZ4 835 aa16.58■□□□□ 0.24
AP001341.1-201ENST00000409758 EIF4A2Q14240 407 aaKnown RBP16.57■□□□□ 0.24
AP001341.1-201ENST00000409758 MORC1Q86VD1 984 aa16.57■□□□□ 0.24
AP001341.1-201ENST00000409758 LOC102724428A0A0B4J2F2 783 aa16.56■□□□□ 0.24
AP001341.1-201ENST00000409758 GRIN3BO60391 1043 aa16.56■□□□□ 0.24
AP001341.1-201ENST00000409758 PHKG2P15735 406 aa16.56■□□□□ 0.24
AP001341.1-201ENST00000409758 SIK1P57059 783 aa16.56■□□□□ 0.24
AP001341.1-201ENST00000409758 KIF20BQ96Q89 1820 aa16.55■□□□□ 0.24
AP001341.1-201ENST00000409758 ATP6V1AP38606 617 aa16.55■□□□□ 0.24
AP001341.1-201ENST00000409758 RGPD2P0DJD1 1756 aa16.55■□□□□ 0.24
AP001341.1-201ENST00000409758 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.54■□□□□ 0.24
AP001341.1-201ENST00000409758 PLEKHO1Q53GL0 409 aaPredicted RBP16.54■□□□□ 0.24
AP001341.1-201ENST00000409758 ASAP1Q9ULH1 1129 aa16.54■□□□□ 0.24
AP001341.1-201ENST00000409758 KNSTRNQ9Y448 316 aa16.54■□□□□ 0.24
AP001341.1-201ENST00000409758 GNPATO15228 680 aa16.53■□□□□ 0.24
AP001341.1-201ENST00000409758 HSP90AB1P08238 724 aaKnown RBP16.53■□□□□ 0.24
AP001341.1-201ENST00000409758 CD2APQ9Y5K6 639 aa16.53■□□□□ 0.24
AP001341.1-201ENST00000409758 SSFA2P28290 1259 aa16.52■□□□□ 0.24
AP001341.1-201ENST00000409758 CABP4P57796 275 aa16.51■□□□□ 0.23
AP001341.1-201ENST00000409758 AMOTQ4VCS5 1084 aa16.51■□□□□ 0.23
AP001341.1-201ENST00000409758 ZNF530Q6P9A1 599 aaPredicted RBP16.51■□□□□ 0.23
AP001341.1-201ENST00000409758 SMIM5Q71RC9 77 aa16.51■□□□□ 0.23
AP001341.1-201ENST00000409758 LINC00116Q8NCU8 138 aa16.51■□□□□ 0.23
AP001341.1-201ENST00000409758 DCAF5Q96JK2 942 aa16.51■□□□□ 0.23
AP001341.1-201ENST00000409758 RBM42Q9BTD8 480 aaKnown RBP16.51■□□□□ 0.23
AP001341.1-201ENST00000409758 SHANK3Q9BYB0 1731 aa16.5■□□□□ 0.23
AP001341.1-201ENST00000409758 ERVV-2B6SEH9 535 aa16.5■□□□□ 0.23
AP001341.1-201ENST00000409758 YBX3P16989 372 aaKnown RBP eCLIP16.5■□□□□ 0.23
AP001341.1-201ENST00000409758 C1orf141Q5JVX7 400 aa16.5■□□□□ 0.23
AP001341.1-201ENST00000409758 ATG3Q9NT62 314 aa16.5■□□□□ 0.23
AP001341.1-201ENST00000409758 NCAPD2Q15021 1401 aa16.5■□□□□ 0.23
AP001341.1-201ENST00000409758 IGSF1Q8N6C5 1336 aa16.49■□□□□ 0.23
AP001341.1-201ENST00000409758 LY75O60449 1722 aa16.49■□□□□ 0.23
AP001341.1-201ENST00000409758 GIGYF1O75420 1035 aaPredicted RBP16.48■□□□□ 0.23
AP001341.1-201ENST00000409758 MTHFSP49914 203 aa16.48■□□□□ 0.23
AP001341.1-201ENST00000409758 ITPK1Q13572 414 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms