RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 HSP90AB3PQ58FF7 597 aa9.92□□□□□ -0.82
SCN9A-203ENST00000409672 SERPINA10Q9UK55 444 aa9.92□□□□□ -0.82
SCN9A-203ENST00000409672 EXOSC9Q06265 439 aaKnown RBP9.92□□□□□ -0.82
SCN9A-203ENST00000409672 STIM1Q13586 685 aa9.92□□□□□ -0.82
SCN9A-203ENST00000409672 SKOR2Q2VWA4 1001 aaPredicted RBP9.92□□□□□ -0.82
SCN9A-203ENST00000409672 AIDAQ96BJ3 306 aa9.92□□□□□ -0.82
SCN9A-203ENST00000409672 MYD88Q99836 296 aa9.92□□□□□ -0.82
SCN9A-203ENST00000409672 RFC4P35249 363 aa9.92□□□□□ -0.82
SCN9A-203ENST00000409672 ZNF652Q9Y2D9 606 aa9.92□□□□□ -0.82
SCN9A-203ENST00000409672 MRPS9P82933 396 aaKnown RBP9.92□□□□□ -0.82
SCN9A-203ENST00000409672 CCDC191Q8NCU4 936 aa9.92□□□□□ -0.82
SCN9A-203ENST00000409672 ERLIN2O94905 339 aa9.92□□□□□ -0.82
SCN9A-203ENST00000409672 CT47B1P0C2W7 299 aaPredicted RBP9.92□□□□□ -0.82
SCN9A-203ENST00000409672 DCTN1Q14203 1278 aa9.91□□□□□ -0.82
SCN9A-203ENST00000409672 NUTM1Q86Y26 1132 aa9.91□□□□□ -0.82
SCN9A-203ENST00000409672 SLC12A5Q9H2X9 1139 aa9.91□□□□□ -0.82
SCN9A-203ENST00000409672 KLHL10Q6JEL2 608 aa9.91□□□□□ -0.82
SCN9A-203ENST00000409672 LARP6Q9BRS8 491 aaKnown RBP9.91□□□□□ -0.82
SCN9A-203ENST00000409672 UBAP1LF5GYI3 381 aa9.91□□□□□ -0.82
SCN9A-203ENST00000409672 GOPCQ9HD26 462 aa9.91□□□□□ -0.82
SCN9A-203ENST00000409672 CEBPAP49715 358 aaPredicted RBP9.91□□□□□ -0.82
SCN9A-203ENST00000409672 PPFIBP1Q86W92 1011 aa9.91□□□□□ -0.82
SCN9A-203ENST00000409672 SRGAP3O43295 1099 aa9.9□□□□□ -0.82
SCN9A-203ENST00000409672 KIF20AO95235 890 aa9.9□□□□□ -0.82
SCN9A-203ENST00000409672 CKAP2LQ8IYA6 745 aa9.9□□□□□ -0.82
SCN9A-203ENST00000409672 FOXO3O43524 673 aa9.9□□□□□ -0.82
SCN9A-203ENST00000409672 ZNF444Q8N0Y2 327 aaPredicted RBP9.9□□□□□ -0.82
SCN9A-203ENST00000409672 BMP2KQ9NSY1 1161 aaPredicted RBP9.9□□□□□ -0.82
SCN9A-203ENST00000409672 VPS8Q8N3P4 1428 aa9.9□□□□□ -0.82
SCN9A-203ENST00000409672 CSPG5O95196 566 aa9.9□□□□□ -0.82
SCN9A-203ENST00000409672 ATP2B3Q16720 1220 aa9.9□□□□□ -0.83
SCN9A-203ENST00000409672 WAPLQ7Z5K2 1190 aa9.9□□□□□ -0.83
SCN9A-203ENST00000409672 ANKRD18AQ8IVF6 992 aa9.9□□□□□ -0.83
SCN9A-203ENST00000409672 ATXN8OSP0DMR3 200 aa9.89□□□□□ -0.83
SCN9A-203ENST00000409672 CEP126Q9P2H0 1117 aa9.89□□□□□ -0.83
SCN9A-203ENST00000409672 RAPGEF2Q9Y4G8 1499 aa9.89□□□□□ -0.83
SCN9A-203ENST00000409672 CCDC112Q8NEF3 446 aa9.89□□□□□ -0.83
SCN9A-203ENST00000409672 FERMT2Q96AC1 680 aa9.89□□□□□ -0.83
SCN9A-203ENST00000409672 USP8P40818 1118 aa9.89□□□□□ -0.83
SCN9A-203ENST00000409672 CDC45O75419 566 aa9.89□□□□□ -0.83
SCN9A-203ENST00000409672 ARL1P40616 181 aaPredicted RBP9.89□□□□□ -0.83
SCN9A-203ENST00000409672 ZNF396Q96N95 335 aaPredicted RBP9.89□□□□□ -0.83
SCN9A-203ENST00000409672 CIZ1Q9ULV3 898 aaPredicted RBP9.89□□□□□ -0.83
SCN9A-203ENST00000409672 ADAMTS8Q9UP79 889 aa9.89□□□□□ -0.83
SCN9A-203ENST00000409672 GOLGA6L10A6NI86 522 aa9.89□□□□□ -0.83
SCN9A-203ENST00000409672 KIAA1328Q86T90 577 aa9.89□□□□□ -0.83
SCN9A-203ENST00000409672 CEP57L1Q8IYX8 460 aa9.89□□□□□ -0.83
SCN9A-203ENST00000409672 ACBD3Q9H3P7 528 aa9.89□□□□□ -0.83
SCN9A-203ENST00000409672 RAB11FIP4Q86YS3 637 aa9.89□□□□□ -0.83
SCN9A-203ENST00000409672 TRMT112Q9UI30 125 aaKnown RBP9.89□□□□□ -0.83
SCN9A-203ENST00000409672 FAM212AQ96EL1 285 aa9.88□□□□□ -0.83
SCN9A-203ENST00000409672 LRRCC1Q9C099 1032 aa9.88□□□□□ -0.83
SCN9A-203ENST00000409672 ARGLU1Q9NWB6 273 aaPredicted RBP9.88□□□□□ -0.83
SCN9A-203ENST00000409672 RFX1P22670 979 aa9.88□□□□□ -0.83
SCN9A-203ENST00000409672 CDCA7LQ96GN5 454 aa9.88□□□□□ -0.83
SCN9A-203ENST00000409672 NOL7Q9UMY1 257 aaKnown RBP9.88□□□□□ -0.83
SCN9A-203ENST00000409672 GJA3Q9Y6H8 435 aa9.88□□□□□ -0.83
SCN9A-203ENST00000409672 GNAI3P08754 354 aa9.88□□□□□ -0.83
SCN9A-203ENST00000409672 GOLGA6L10A0A0M3HER8 536 aa9.88□□□□□ -0.83
SCN9A-203ENST00000409672 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.88□□□□□ -0.83
SCN9A-203ENST00000409672 BOLA2Q9H3K6 86 aa9.88□□□□□ -0.83
SCN9A-203ENST00000409672 HOMER2Q9NSB8 354 aa9.88□□□□□ -0.83
SCN9A-203ENST00000409672 CNTLNQ9NXG0 1405 aa9.88□□□□□ -0.83
SCN9A-203ENST00000409672 MCM10Q7L590 875 aa9.88□□□□□ -0.83
SCN9A-203ENST00000409672 EIF5P55010 431 aaKnown RBP9.88□□□□□ -0.83
SCN9A-203ENST00000409672 CHRNA2Q15822 529 aa9.88□□□□□ -0.83
SCN9A-203ENST00000409672 CUL5Q93034 780 aa9.88□□□□□ -0.83
SCN9A-203ENST00000409672 BCCIPQ9P287 314 aaKnown RBP eCLIP9.88□□□□□ -0.83
SCN9A-203ENST00000409672 CAMK4Q16566 473 aa9.87□□□□□ -0.83
SCN9A-203ENST00000409672 CYP46A1Q9Y6A2 500 aa9.87□□□□□ -0.83
SCN9A-203ENST00000409672 CFAP65Q6ZU64 1925 aaKnown RBP9.87□□□□□ -0.83
SCN9A-203ENST00000409672 PICALMQ13492 652 aa9.87□□□□□ -0.83
SCN9A-203ENST00000409672 VEZTQ9HBM0 779 aa9.87□□□□□ -0.83
SCN9A-203ENST00000409672 JAKMIP1Q96N16 626 aaKnown RBP9.87□□□□□ -0.83
SCN9A-203ENST00000409672 GSE1Q14687 1217 aa9.87□□□□□ -0.83
SCN9A-203ENST00000409672 AKNAD1Q5T1N1 836 aa9.87□□□□□ -0.83
SCN9A-203ENST00000409672 ZSCAN25Q6NSZ9 544 aa9.87□□□□□ -0.83
SCN9A-203ENST00000409672 TCP11L2Q8N4U5 519 aa9.87□□□□□ -0.83
SCN9A-203ENST00000409672 JAG2Q9Y219 1238 aa9.87□□□□□ -0.83
SCN9A-203ENST00000409672 CBX1P83916 185 aa9.87□□□□□ -0.83
SCN9A-203ENST00000409672 STAC3Q96MF2 364 aa9.87□□□□□ -0.83
SCN9A-203ENST00000409672 CCDC150Q8NCX0 1101 aa9.87□□□□□ -0.83
SCN9A-203ENST00000409672 IQSEC3Q9UPP2 1182 aaPredicted RBP9.87□□□□□ -0.83
SCN9A-203ENST00000409672 UBE4AQ14139 1066 aa9.87□□□□□ -0.83
SCN9A-203ENST00000409672 FANCD2Q9BXW9 1451 aa9.87□□□□□ -0.83
SCN9A-203ENST00000409672 BICD1Q96G01 975 aa9.86□□□□□ -0.83
SCN9A-203ENST00000409672 NUCB2P80303 420 aa9.86□□□□□ -0.83
SCN9A-203ENST00000409672 ZBTB3Q9H5J0 574 aa9.86□□□□□ -0.83
SCN9A-203ENST00000409672 THUMPD2Q9BTF0 503 aaKnown RBP9.86□□□□□ -0.83
SCN9A-203ENST00000409672 TNMDQ9H2S6 317 aa9.86□□□□□ -0.83
SCN9A-203ENST00000409672 MROH2BQ7Z745 1585 aa9.86□□□□□ -0.83
SCN9A-203ENST00000409672 SMARCA5O60264 1052 aaPredicted RBP9.86□□□□□ -0.83
SCN9A-203ENST00000409672 PROCA1Q8NCQ7 364 aaPredicted RBP9.86□□□□□ -0.83
SCN9A-203ENST00000409672 GRIPAP1Q4V328 841 aa9.86□□□□□ -0.83
SCN9A-203ENST00000409672 AQRO60306 1485 aaKnown RBP eCLIP9.86□□□□□ -0.831e-7■■■□□ 15.4
SCN9A-203ENST00000409672 HIP1O00291 1037 aa9.86□□□□□ -0.83
SCN9A-203ENST00000409672 ZBTB9Q96C00 473 aa9.86□□□□□ -0.83
SCN9A-203ENST00000409672 SP4Q02446 784 aa9.86□□□□□ -0.83
SCN9A-203ENST00000409672 ISM2Q6H9L7 571 aa9.86□□□□□ -0.83
SCN9A-203ENST00000409672 RIMBP2O15034 1052 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms