RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 SKIP12755 728 aa8.56□□□□□ -1.04
PMS1-203ENST00000409593 TRAK2O60296 914 aa8.56□□□□□ -1.04
PMS1-203ENST00000409593 CYP2U1Q7Z449 544 aa8.56□□□□□ -1.04
PMS1-203ENST00000409593 SPINT1O43278 529 aa8.55□□□□□ -1.04
PMS1-203ENST00000409593 PTGIRP43119 386 aa8.55□□□□□ -1.04
PMS1-203ENST00000409593 CALR3Q96L12 384 aaKnown RBP8.55□□□□□ -1.04
PMS1-203ENST00000409593 INSM2Q96T92 566 aaPredicted RBP8.55□□□□□ -1.04
PMS1-203ENST00000409593 OSBPL3Q9H4L5 887 aa8.55□□□□□ -1.04
PMS1-203ENST00000409593 POLMQ9NP87 494 aaPredicted RBP8.55□□□□□ -1.04
PMS1-203ENST00000409593 SOBPA7XYQ1 873 aa8.54□□□□□ -1.04
PMS1-203ENST00000409593 MAN1A2O60476 641 aa8.54□□□□□ -1.04
PMS1-203ENST00000409593 MAP7D1Q3KQU3 841 aa8.54□□□□□ -1.04
PMS1-203ENST00000409593 ZMYND15Q9H091 742 aa8.54□□□□□ -1.04
PMS1-203ENST00000409593 ZNF777Q9ULD5 760 aaPredicted RBP8.54□□□□□ -1.04
PMS1-203ENST00000409593 TTLL8A6PVC2 850 aa8.53□□□□□ -1.04
PMS1-203ENST00000409593 USP4Q13107 963 aa8.53□□□□□ -1.04
PMS1-203ENST00000409593 KDF1Q8NAX2 398 aaPredicted RBP8.53□□□□□ -1.04
PMS1-203ENST00000409593 UCN2Q96RP3 112 aa8.53□□□□□ -1.04
PMS1-203ENST00000409593 CHIC2Q9UKJ5 165 aa8.53□□□□□ -1.04
PMS1-203ENST00000409593 C14orf37Q86TY3 774 aa8.53□□□□□ -1.04
PMS1-203ENST00000409593 DEPDC4Q8N2C3 294 aa8.53□□□□□ -1.04
PMS1-203ENST00000409593 SIRT1Q96EB6 747 aa8.53□□□□□ -1.04
PMS1-203ENST00000409593 ARHGEF10LQ9HCE6 1279 aa8.53□□□□□ -1.04
PMS1-203ENST00000409593 SOS2Q07890 1332 aaPredicted RBP8.52□□□□□ -1.05
PMS1-203ENST00000409593 FIGNL2A6NMB9 653 aa8.52□□□□□ -1.05
PMS1-203ENST00000409593 MEN1O00255 615 aa8.52□□□□□ -1.05
PMS1-203ENST00000409593 CTSOP43234 321 aaPredicted RBP8.52□□□□□ -1.05
PMS1-203ENST00000409593 RAB6BQ9NRW1 208 aa8.52□□□□□ -1.05
PMS1-203ENST00000409593 USP17L5A8MUK1 530 aa8.51□□□□□ -1.05
PMS1-203ENST00000409593 NCOA4Q13772 614 aa8.51□□□□□ -1.05
PMS1-203ENST00000409593 EML3Q32P44 896 aa8.51□□□□□ -1.05
PMS1-203ENST00000409593 TBC1D9Q6ZT07 1266 aa8.51□□□□□ -1.05
PMS1-203ENST00000409593 NFATC2IPQ8NCF5 419 aa8.51□□□□□ -1.05
PMS1-203ENST00000409593 DNMT3LQ9UJW3 386 aa8.5□□□□□ -1.05
PMS1-203ENST00000409593 A0A1W2PRU2 124 aa8.49□□□□□ -1.05
PMS1-203ENST00000409593 ATP9BO43861 1147 aa8.49□□□□□ -1.05
PMS1-203ENST00000409593 NLRP3Q96P20 1036 aa8.49□□□□□ -1.05
PMS1-203ENST00000409593 USP17L3A6NCW0 530 aa8.48□□□□□ -1.05
PMS1-203ENST00000409593 USP17L4A6NCW7 530 aa8.48□□□□□ -1.05
PMS1-203ENST00000409593 GNRH1P01148 92 aa8.48□□□□□ -1.05
PMS1-203ENST00000409593 FOXD4L5Q5VV16 416 aaPredicted RBP8.48□□□□□ -1.05
PMS1-203ENST00000409593 USP17L2Q6R6M4 530 aa8.48□□□□□ -1.05
PMS1-203ENST00000409593 USP17L1Q7RTZ2 530 aa8.48□□□□□ -1.05
PMS1-203ENST00000409593 NOD1Q9Y239 953 aa8.48□□□□□ -1.05
PMS1-203ENST00000409593 STAU1O95793 577 aaKnown RBP8.47□□□□□ -1.05
PMS1-203ENST00000409593 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.47□□□□□ -1.05
PMS1-203ENST00000409593 RNF217Q8TC41 542 aa8.47□□□□□ -1.05
PMS1-203ENST00000409593 PSME1Q06323 249 aa8.46□□□□□ -1.05
PMS1-203ENST00000409593 CLN3Q13286 438 aa8.46□□□□□ -1.05
PMS1-203ENST00000409593 TFIP11Q9UBB9 837 aaKnown RBP8.46□□□□□ -1.05
PMS1-203ENST00000409593 PALM3A6NDB9 673 aaPredicted RBP8.46□□□□□ -1.06
PMS1-203ENST00000409593 LZTS3O60299 673 aaPredicted RBP8.46□□□□□ -1.06
PMS1-203ENST00000409593 GTF2IP78347 998 aa8.46□□□□□ -1.06
PMS1-203ENST00000409593 ESCO1Q5FWF5 840 aa8.46□□□□□ -1.06
PMS1-203ENST00000409593 SLC27A3Q5K4L6 730 aa8.46□□□□□ -1.06
PMS1-203ENST00000409593 LCE2AQ5TA79 106 aaPredicted RBP8.46□□□□□ -1.06
PMS1-203ENST00000409593 CNKSR1Q969H4 720 aa8.46□□□□□ -1.06
PMS1-203ENST00000409593 IL2RAP01589 272 aa8.45□□□□□ -1.06
PMS1-203ENST00000409593 ETNK1Q9HBU6 452 aa8.45□□□□□ -1.06
PMS1-203ENST00000409593 TREML4Q6UXN2 200 aa8.44□□□□□ -1.06
PMS1-203ENST00000409593 PRICKLE2Q7Z3G6 844 aa8.44□□□□□ -1.06
PMS1-203ENST00000409593 PLEKHM2Q8IWE5 1019 aa8.44□□□□□ -1.06
PMS1-203ENST00000409593 PPP1R12CQ9BZL4 782 aa8.44□□□□□ -1.06
PMS1-203ENST00000409593 MAFBQ9Y5Q3 323 aaPredicted RBP8.44□□□□□ -1.06
PMS1-203ENST00000409593 RNF144AP50876 292 aaPredicted RBP8.43□□□□□ -1.06
PMS1-203ENST00000409593 GDF10P55107 478 aa8.43□□□□□ -1.06
PMS1-203ENST00000409593 LYSMD3Q7Z3D4 306 aa8.43□□□□□ -1.06
PMS1-203ENST00000409593 ESYT1Q9BSJ8 1104 aa8.43□□□□□ -1.06
PMS1-203ENST00000409593 ARID3CA6NKF2 412 aa8.43□□□□□ -1.06
PMS1-203ENST00000409593 GPC1P35052 558 aa8.43□□□□□ -1.06
PMS1-203ENST00000409593 VEGFBP49765 207 aa8.43□□□□□ -1.06
PMS1-203ENST00000409593 NXF1Q9UBU9 619 aaKnown RBP8.43□□□□□ -1.06
PMS1-203ENST00000409593 RHOQP17081 205 aa8.42□□□□□ -1.06
PMS1-203ENST00000409593 LMOD1P29536 600 aaPredicted RBP8.42□□□□□ -1.06
PMS1-203ENST00000409593 SCNN1DP51172 638 aa8.42□□□□□ -1.06
PMS1-203ENST00000409593 PTSQ03393 145 aa8.42□□□□□ -1.06
PMS1-203ENST00000409593 TRIM50Q86XT4 487 aa8.42□□□□□ -1.06
PMS1-203ENST00000409593 MKRN1Q9UHC7 482 aaKnown RBP8.42□□□□□ -1.06
PMS1-203ENST00000409593 PCDHGA11Q9Y5H2 935 aa8.42□□□□□ -1.06
PMS1-203ENST00000409593 CENPCQ03188 943 aa8.41□□□□□ -1.06
PMS1-203ENST00000409593 TLR1Q15399 786 aa8.41□□□□□ -1.06
PMS1-203ENST00000409593 STK17AQ9UEE5 414 aa8.41□□□□□ -1.06
PMS1-203ENST00000409593 SERTAD1Q9UHV2 236 aa8.41□□□□□ -1.06
PMS1-203ENST00000409593 TERTO14746 1132 aaKnown RBP8.4□□□□□ -1.06
PMS1-203ENST00000409593 ATP1A2P50993 1020 aa8.4□□□□□ -1.06
PMS1-203ENST00000409593 XAGE2Q96GT9 111 aa8.4□□□□□ -1.06
PMS1-203ENST00000409593 INHAP05111 366 aa8.4□□□□□ -1.07
PMS1-203ENST00000409593 GTF2E1P29083 439 aaPredicted RBP8.4□□□□□ -1.07
PMS1-203ENST00000409593 OGFOD1Q8N543 542 aa8.4□□□□□ -1.07
PMS1-203ENST00000409593 ZNF594Q96JF6 807 aaPredicted RBP8.4□□□□□ -1.07
PMS1-203ENST00000409593 ZSCAN10Q96SZ4 725 aaPredicted RBP8.4□□□□□ -1.07
PMS1-203ENST00000409593 TMEM229AB2RXF0 380 aa8.39□□□□□ -1.07
PMS1-203ENST00000409593 RFX1P22670 979 aa8.39□□□□□ -1.07
PMS1-203ENST00000409593 CLDN10P78369 228 aa8.39□□□□□ -1.07
PMS1-203ENST00000409593 TPCN2Q8NHX9 752 aa8.39□□□□□ -1.07
PMS1-203ENST00000409593 GRIP2Q9C0E4 1043 aa8.39□□□□□ -1.07
PMS1-203ENST00000409593 DNAAF2Q9NVR5 837 aaKnown RBP8.39□□□□□ -1.07
PMS1-203ENST00000409593 KIAA1024Q9UPX6 916 aa8.39□□□□□ -1.07
PMS1-203ENST00000409593 POU4F2Q12837 409 aa8.38□□□□□ -1.07
PMS1-203ENST00000409593 TMEM214Q6NUQ4 689 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms