RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 RAPGEF4Q8WZA2 1011 aa17.29■□□□□ 0.36
LIMS2-203ENST00000409254 ADAMTS8Q9UP79 889 aa17.29■□□□□ 0.36
LIMS2-203ENST00000409254 IL2RBP14784 551 aa17.28■□□□□ 0.36
LIMS2-203ENST00000409254 AMOTQ4VCS5 1084 aa17.28■□□□□ 0.36
LIMS2-203ENST00000409254 RUNDC1Q96C34 613 aa17.27■□□□□ 0.36
LIMS2-203ENST00000409254 GJD4Q96KN9 370 aaPredicted RBP17.27■□□□□ 0.36
LIMS2-203ENST00000409254 PLEKHF1Q96S99 279 aa17.27■□□□□ 0.36
LIMS2-203ENST00000409254 BRWD3Q6RI45 1802 aa17.26■□□□□ 0.35
LIMS2-203ENST00000409254 ONECUT3O60422 494 aaPredicted RBP17.26■□□□□ 0.35
LIMS2-203ENST00000409254 TATP17735 454 aaPredicted RBP17.26■□□□□ 0.35
LIMS2-203ENST00000409254 MAPK8IP3Q9UPT6 1336 aa17.25■□□□□ 0.35
LIMS2-203ENST00000409254 PRKAR2BP31323 418 aa17.25■□□□□ 0.35
LIMS2-203ENST00000409254 GAS2L2Q8NHY3 880 aa17.25■□□□□ 0.35
LIMS2-203ENST00000409254 HMOX1P09601 288 aa17.24■□□□□ 0.35
LIMS2-203ENST00000409254 AEBP1Q8IUX7 1158 aa17.24■□□□□ 0.35
LIMS2-203ENST00000409254 SIPA1L3O60292 1781 aaPredicted RBP17.24■□□□□ 0.35
LIMS2-203ENST00000409254 RBM6P78332 1123 aaKnown RBP17.23■□□□□ 0.35
LIMS2-203ENST00000409254 PLEKHO1Q53GL0 409 aaPredicted RBP17.23■□□□□ 0.35
LIMS2-203ENST00000409254 FAM9BQ8IZU0 186 aa17.23■□□□□ 0.35
LIMS2-203ENST00000409254 QTRT2Q9H974 415 aaKnown RBP17.23■□□□□ 0.35
LIMS2-203ENST00000409254 SPG7Q9UQ90 795 aa17.23■□□□□ 0.35
LIMS2-203ENST00000409254 SBF2Q86WG5 1849 aa17.23■□□□□ 0.35
LIMS2-203ENST00000409254 PCDH11XQ9BZA7 1347 aa17.22■□□□□ 0.35
LIMS2-203ENST00000409254 PCDH11YQ9BZA8 1340 aa17.22■□□□□ 0.35
LIMS2-203ENST00000409254 BCL9O00512 1426 aa17.22■□□□□ 0.35
LIMS2-203ENST00000409254 USHBP1Q8N6Y0 703 aa17.22■□□□□ 0.35
LIMS2-203ENST00000409254 ITGB4P16144 1822 aa17.21■□□□□ 0.35
LIMS2-203ENST00000409254 KAT6BQ8WYB5 2073 aa17.21■□□□□ 0.35
LIMS2-203ENST00000409254 LMOD3Q0VAK6 560 aa17.21■□□□□ 0.35
LIMS2-203ENST00000409254 CCDC9Q9Y3X0 531 aaKnown RBP17.21■□□□□ 0.35
LIMS2-203ENST00000409254 EP400Q96L91 3159 aa17.2■□□□□ 0.34
LIMS2-203ENST00000409254 MRC1P22897 1456 aa17.2■□□□□ 0.34
LIMS2-203ENST00000409254 HTATSF1O43719 755 aaKnown RBP17.2■□□□□ 0.34
LIMS2-203ENST00000409254 CCDC27Q2M243 656 aa17.2■□□□□ 0.34
LIMS2-203ENST00000409254 MAP3K5Q99683 1374 aa17.19■□□□□ 0.34
LIMS2-203ENST00000409254 NFE2L2Q16236 605 aa17.19■□□□□ 0.34
LIMS2-203ENST00000409254 DOT1LQ8TEK3 1739 aa17.18■□□□□ 0.34
LIMS2-203ENST00000409254 HSP90AB1P08238 724 aaKnown RBP17.18■□□□□ 0.34
LIMS2-203ENST00000409254 ZCRB1Q8TBF4 217 aaKnown RBP17.18■□□□□ 0.34
LIMS2-203ENST00000409254 TOGARAM1Q9Y4F4 1720 aa17.18■□□□□ 0.34
LIMS2-203ENST00000409254 TMPOP42166 694 aaKnown RBP17.17■□□□□ 0.34
LIMS2-203ENST00000409254 AKAP4Q5JQC9 854 aa17.17■□□□□ 0.34
LIMS2-203ENST00000409254 USP35Q9P2H5 1018 aa17.17■□□□□ 0.34
LIMS2-203ENST00000409254 RGS17Q9UGC6 210 aaPredicted RBP17.17■□□□□ 0.34
LIMS2-203ENST00000409254 NHSQ6T4R5 1651 aa17.16■□□□□ 0.34
LIMS2-203ENST00000409254 EXOC5O00471 708 aa17.16■□□□□ 0.34
LIMS2-203ENST00000409254 RXRBP28702 533 aa17.16■□□□□ 0.34
LIMS2-203ENST00000409254 NKX1-1Q15270 411 aaPredicted RBP17.16■□□□□ 0.34
LIMS2-203ENST00000409254 DDB1Q16531 1140 aa17.16■□□□□ 0.34
LIMS2-203ENST00000409254 FAM98CQ17RN3 349 aaKnown RBP17.16■□□□□ 0.34
LIMS2-203ENST00000409254 C1orf141Q5JVX7 400 aa17.16■□□□□ 0.34
LIMS2-203ENST00000409254 IFNL2Q8IZJ0 200 aa17.16■□□□□ 0.34
LIMS2-203ENST00000409254 PHACTR3Q96KR7 559 aa17.16■□□□□ 0.34
LIMS2-203ENST00000409254 CEMIPQ8WUJ3 1361 aa17.15■□□□□ 0.34
LIMS2-203ENST00000409254 MTHFSDQ2M296 383 aaKnown RBP17.15■□□□□ 0.34
LIMS2-203ENST00000409254 ZNF530Q6P9A1 599 aaPredicted RBP17.15■□□□□ 0.34
LIMS2-203ENST00000409254 PAPPAQ13219 1627 aa17.14■□□□□ 0.33
LIMS2-203ENST00000409254 GNAT3A8MTJ3 354 aa17.14■□□□□ 0.33
LIMS2-203ENST00000409254 KDM3BQ7LBC6 1761 aa17.14■□□□□ 0.33
LIMS2-203ENST00000409254 RGS12O14924 1447 aa17.13■□□□□ 0.33
LIMS2-203ENST00000409254 APAF1O14727 1248 aa17.13■□□□□ 0.33
LIMS2-203ENST00000409254 PHKG2P15735 406 aa17.13■□□□□ 0.33
LIMS2-203ENST00000409254 CALD1Q05682 793 aaKnown RBP17.13■□□□□ 0.33
LIMS2-203ENST00000409254 CCDC146Q8IYE0 955 aa17.13■□□□□ 0.33
LIMS2-203ENST00000409254 RGPD3A6NKT7 1758 aaPredicted RBP17.12■□□□□ 0.33
LIMS2-203ENST00000409254 RGPD4Q7Z3J3 1758 aa17.12■□□□□ 0.33
LIMS2-203ENST00000409254 UBR2Q8IWV8 1755 aa17.12■□□□□ 0.33
LIMS2-203ENST00000409254 CYP27B1O15528 508 aa17.12■□□□□ 0.33
LIMS2-203ENST00000409254 DCAF5Q96JK2 942 aa17.12■□□□□ 0.33
LIMS2-203ENST00000409254 ZBED9Q6R2W3 1325 aa17.12■□□□□ 0.33
LIMS2-203ENST00000409254 ZNF831Q5JPB2 1677 aa17.11■□□□□ 0.33
LIMS2-203ENST00000409254 RTF1Q92541 710 aaKnown RBP17.11■□□□□ 0.33
LIMS2-203ENST00000409254 IL16Q14005 1332 aa17.11■□□□□ 0.33
LIMS2-203ENST00000409254 CACNA1FO60840 1977 aa17.11■□□□□ 0.33
LIMS2-203ENST00000409254 KDM6AO15550 1401 aaPredicted RBP17.11■□□□□ 0.33
LIMS2-203ENST00000409254 CICQ96RK0 1608 aaPredicted RBP17.1■□□□□ 0.33
LIMS2-203ENST00000409254 RIPK4P57078 832 aa17.1■□□□□ 0.33
LIMS2-203ENST00000409254 POTEAQ6S8J7 498 aa17.1■□□□□ 0.33
LIMS2-203ENST00000409254 SEPT12Q8IYM1 358 aa17.1■□□□□ 0.33
LIMS2-203ENST00000409254 ZNF521Q96K83 1311 aa17.1■□□□□ 0.33
LIMS2-203ENST00000409254 BABAM1Q9NWV8 329 aa17.09■□□□□ 0.33
LIMS2-203ENST00000409254 BTAF1O14981 1849 aa17.09■□□□□ 0.33
LIMS2-203ENST00000409254 ERVV-2B6SEH9 535 aa17.08■□□□□ 0.32
LIMS2-203ENST00000409254 PDE3BQ13370 1112 aa17.08■□□□□ 0.32
LIMS2-203ENST00000409254 WDR63Q8IWG1 891 aa17.08■□□□□ 0.32
LIMS2-203ENST00000409254 HNRNPUQ00839 825 aaKnown RBP eCLIP17.07■□□□□ 0.32
LIMS2-203ENST00000409254 WWC1Q8IX03 1113 aa17.07■□□□□ 0.32
LIMS2-203ENST00000409254 TRIM35Q9UPQ4 493 aa17.07■□□□□ 0.32
LIMS2-203ENST00000409254 A0A0G2JS52 829 aa17.06■□□□□ 0.32
LIMS2-203ENST00000409254 MYT1Q01538 1121 aa17.06■□□□□ 0.32
LIMS2-203ENST00000409254 KRT27Q7Z3Y8 459 aa17.06■□□□□ 0.32
LIMS2-203ENST00000409254 TNS1Q9HBL0 1735 aaKnown RBP17.05■□□□□ 0.32
LIMS2-203ENST00000409254 RNMTO43148 476 aaKnown RBP17.05■□□□□ 0.32
LIMS2-203ENST00000409254 MARCH10Q8NA82 808 aaPredicted RBP17.05■□□□□ 0.32
LIMS2-203ENST00000409254 LY75O60449 1722 aa17.04■□□□□ 0.32
LIMS2-203ENST00000409254 LAMB4A4D0S4 1761 aa17.04■□□□□ 0.32
LIMS2-203ENST00000409254 FAM196AQ6ZSG2 479 aa17.03■□□□□ 0.32
LIMS2-203ENST00000409254 IL17REQ8NFR9 667 aa17.03■□□□□ 0.32
LIMS2-203ENST00000409254 DDX54Q8TDD1 881 aaKnown RBP17.03■□□□□ 0.32
LIMS2-203ENST00000409254 SLC52A2Q9HAB3 445 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms