RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 TRIM35Q9UPQ4 493 aa15.39■□□□□ 0.05
HERC3-203ENST00000407637 IFT140Q96RY7 1462 aa15.39■□□□□ 0.05
HERC3-203ENST00000407637 U2SURPO15042 1029 aaKnown RBP15.39■□□□□ 0.05
HERC3-203ENST00000407637 MX1P20591 662 aa15.39■□□□□ 0.05
HERC3-203ENST00000407637 IFT57Q9NWB7 429 aa15.39■□□□□ 0.05
HERC3-203ENST00000407637 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.39■□□□□ 0.05
HERC3-203ENST00000407637 V9GYY5 206 aaPredicted RBP15.39■□□□□ 0.05
HERC3-203ENST00000407637 SAMD9LQ8IVG5 1584 aa15.39■□□□□ 0.05
HERC3-203ENST00000407637 YEATS2Q9ULM3 1422 aa15.38■□□□□ 0.05
HERC3-203ENST00000407637 CHRM1P11229 460 aaPredicted RBP15.38■□□□□ 0.05
HERC3-203ENST00000407637 HNRNPH2P55795 449 aaKnown RBP15.38■□□□□ 0.05
HERC3-203ENST00000407637 LRMPQ12912 555 aa15.38■□□□□ 0.05
HERC3-203ENST00000407637 OTUD7AQ8TE49 926 aaPredicted RBP15.38■□□□□ 0.05
HERC3-203ENST00000407637 UHRF1BP1LA0JNW5 1464 aa15.38■□□□□ 0.05
HERC3-203ENST00000407637 ERCC6Q03468 1493 aa15.38■□□□□ 0.05
HERC3-203ENST00000407637 MAST1Q9Y2H9 1570 aa15.38■□□□□ 0.05
HERC3-203ENST00000407637 NCBP3Q53F19 620 aaKnown RBP15.38■□□□□ 0.05
HERC3-203ENST00000407637 SDSP20132 328 aa15.37■□□□□ 0.05
HERC3-203ENST00000407637 RAD51AP2Q09MP3 1159 aa15.37■□□□□ 0.05
HERC3-203ENST00000407637 GIMAP6Q6P9H5 292 aa15.37■□□□□ 0.05
HERC3-203ENST00000407637 FAM53CQ9NYF3 392 aa15.37■□□□□ 0.05
HERC3-203ENST00000407637 SPAG9O60271 1321 aaKnown RBP15.37■□□□□ 0.05
HERC3-203ENST00000407637 TMPOP42166 694 aaKnown RBP15.37■□□□□ 0.05
HERC3-203ENST00000407637 RBM6P78332 1123 aaKnown RBP15.36■□□□□ 0.05
HERC3-203ENST00000407637 CHMP4CQ96CF2 233 aa15.36■□□□□ 0.05
HERC3-203ENST00000407637 FUCA2Q9BTY2 467 aa15.36■□□□□ 0.05
HERC3-203ENST00000407637 MAGI1Q96QZ7 1491 aaPredicted RBP15.36■□□□□ 0.05
HERC3-203ENST00000407637 KNDC1Q76NI1 1749 aa15.36■□□□□ 0.05
HERC3-203ENST00000407637 FBXO38Q6PIJ6 1188 aa15.36■□□□□ 0.05
HERC3-203ENST00000407637 CASC1Q6TDU7 716 aa15.36■□□□□ 0.05
HERC3-203ENST00000407637 CNPY2Q9Y2B0 182 aa15.36■□□□□ 0.05
HERC3-203ENST00000407637 REC8O95072 547 aa15.35■□□□□ 0.05
HERC3-203ENST00000407637 CYP2C19P33261 490 aa15.35■□□□□ 0.05
HERC3-203ENST00000407637 CUL4AQ13619 759 aa15.35■□□□□ 0.05
HERC3-203ENST00000407637 ZNF592Q92610 1267 aa15.35■□□□□ 0.05
HERC3-203ENST00000407637 ALDH1L2Q3SY69 923 aa15.35■□□□□ 0.05
HERC3-203ENST00000407637 PTPRTO14522 1441 aa15.35■□□□□ 0.05
HERC3-203ENST00000407637 PLEKHD1A6NEE1 506 aa15.34■□□□□ 0.05
HERC3-203ENST00000407637 RTF1Q92541 710 aaKnown RBP15.34■□□□□ 0.05
HERC3-203ENST00000407637 NOL10Q9BSC4 688 aaKnown RBP15.34■□□□□ 0.05
HERC3-203ENST00000407637 PAXBP1Q9Y5B6 917 aa15.34■□□□□ 0.05
HERC3-203ENST00000407637 SRPK2P78362 688 aaKnown RBP15.34■□□□□ 0.05
HERC3-203ENST00000407637 CCDC186Q7Z3E2 898 aa15.34■□□□□ 0.05
HERC3-203ENST00000407637 SRCIN1Q9C0H9 1055 aa15.34■□□□□ 0.05
HERC3-203ENST00000407637 TMEM87AQ8NBN3 555 aa15.33■□□□□ 0.05
HERC3-203ENST00000407637 ZNF215Q9UL58 517 aaPredicted RBP15.33■□□□□ 0.05
HERC3-203ENST00000407637 ELF2Q15723 593 aa15.33■□□□□ 0.04
HERC3-203ENST00000407637 ATAD2Q6PL18 1390 aa15.33■□□□□ 0.04
HERC3-203ENST00000407637 RPAP1Q9BWH6 1393 aaPredicted RBP15.33■□□□□ 0.04
HERC3-203ENST00000407637 KIAA1210Q9ULL0 1709 aa15.33■□□□□ 0.04
HERC3-203ENST00000407637 WDR33Q9C0J8 1336 aaKnown RBP15.33■□□□□ 0.04
HERC3-203ENST00000407637 ERC2O15083 957 aa15.32■□□□□ 0.04
HERC3-203ENST00000407637 TNNT3P45378 269 aaPredicted RBP15.32■□□□□ 0.04
HERC3-203ENST00000407637 TPD52L1Q16890 204 aaPredicted RBP15.32■□□□□ 0.04
HERC3-203ENST00000407637 CDC42BPBQ9Y5S2 1711 aa15.32■□□□□ 0.04
HERC3-203ENST00000407637 IL16Q14005 1332 aa15.32■□□□□ 0.04
HERC3-203ENST00000407637 PLEKHF1Q96S99 279 aa15.32■□□□□ 0.04
HERC3-203ENST00000407637 SLC12A5Q9H2X9 1139 aa15.32■□□□□ 0.04
HERC3-203ENST00000407637 NRBP1Q9UHY1 535 aa15.32■□□□□ 0.04
HERC3-203ENST00000407637 SYCP2Q9BX26 1530 aa15.32■□□□□ 0.04
HERC3-203ENST00000407637 CREBRFQ8IUR6 639 aa15.31■□□□□ 0.04
HERC3-203ENST00000407637 GTF3C6Q969F1 213 aa15.31■□□□□ 0.04
HERC3-203ENST00000407637 KIF1BPQ96EK5 621 aa15.31■□□□□ 0.04
HERC3-203ENST00000407637 INTS4Q96HW7 963 aaKnown RBP15.31■□□□□ 0.04
HERC3-203ENST00000407637 ZNF446Q9NWS9 450 aa15.31■□□□□ 0.04
HERC3-203ENST00000407637 PIK3R4Q99570 1358 aa15.31■□□□□ 0.04
HERC3-203ENST00000407637 PTCH1Q13635 1447 aa15.31■□□□□ 0.04
HERC3-203ENST00000407637 MCM2P49736 904 aa15.31■□□□□ 0.04
HERC3-203ENST00000407637 UBE2HP62256 183 aa15.31■□□□□ 0.04
HERC3-203ENST00000407637 FAM193AP78312 1265 aa15.31■□□□□ 0.04
HERC3-203ENST00000407637 CFAP70Q5T0N1 1121 aa15.31■□□□□ 0.04
HERC3-203ENST00000407637 RSPH14Q9UHP6 348 aa15.31■□□□□ 0.04
HERC3-203ENST00000407637 APBB1O00213 710 aa15.3■□□□□ 0.04
HERC3-203ENST00000407637 FIBPO43427 364 aa15.3■□□□□ 0.04
HERC3-203ENST00000407637 CEP135Q66GS9 1140 aa15.3■□□□□ 0.04
HERC3-203ENST00000407637 DRC7Q8IY82 874 aa15.3■□□□□ 0.04
HERC3-203ENST00000407637 PALD1Q9ULE6 856 aa15.3■□□□□ 0.04
HERC3-203ENST00000407637 TRAPPC8Q9Y2L5 1435 aa15.3■□□□□ 0.04
HERC3-203ENST00000407637 ABCA6Q8N139 1617 aa15.3■□□□□ 0.04
HERC3-203ENST00000407637 ABCA8O94911 1581 aa15.3■□□□□ 0.04
HERC3-203ENST00000407637 ZSCAN25Q6NSZ9 544 aa15.3■□□□□ 0.04
HERC3-203ENST00000407637 TMX1Q9H3N1 280 aa15.3■□□□□ 0.04
HERC3-203ENST00000407637 EFCC1Q9HA90 598 aa15.3■□□□□ 0.04
HERC3-203ENST00000407637 ERBB3P21860 1342 aa15.29■□□□□ 0.04
HERC3-203ENST00000407637 DCTPP1Q9H773 170 aa15.29■□□□□ 0.04
HERC3-203ENST00000407637 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.29■□□□□ 0.04
HERC3-203ENST00000407637 USP32Q8NFA0 1604 aa15.29■□□□□ 0.04
HERC3-203ENST00000407637 MRPL50Q8N5N7 158 aaKnown RBP15.29■□□□□ 0.04
HERC3-203ENST00000407637 NEK11Q8NG66 645 aa15.29■□□□□ 0.04
HERC3-203ENST00000407637 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.29■□□□□ 0.04
HERC3-203ENST00000407637 MYOM2P54296 1465 aa15.28■□□□□ 0.04
HERC3-203ENST00000407637 MLECQ14165 292 aa15.28■□□□□ 0.04
HERC3-203ENST00000407637 ABCC4O15439 1325 aa15.28■□□□□ 0.04
HERC3-203ENST00000407637 PREX2Q70Z35 1606 aa15.28■□□□□ 0.04
HERC3-203ENST00000407637 NPHP1O15259 732 aa15.28■□□□□ 0.04
HERC3-203ENST00000407637 SOX12O15370 315 aa15.28■□□□□ 0.04
HERC3-203ENST00000407637 NFATC2IPQ8NCF5 419 aa15.28■□□□□ 0.04
HERC3-203ENST00000407637 LUZP1Q86V48 1076 aa15.27■□□□□ 0.04
HERC3-203ENST00000407637 YY1AP1Q9H869 796 aa15.27■□□□□ 0.04
HERC3-203ENST00000407637 TRPM2O94759 1503 aa15.27■□□□□ 0.03
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