RNA–Protein interactions for RNA: ENST00000407298.7

APOBEC3B-204, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APOBEC3B, Length 1,282 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-204ENST00000407298 GRIN3BO60391 1043 aa17.34■□□□□ 0.37
APOBEC3B-204ENST00000407298 AMPHP49418 695 aa17.34■□□□□ 0.37
APOBEC3B-204ENST00000407298 QSER1Q2KHR3 1735 aa17.34■□□□□ 0.37
APOBEC3B-204ENST00000407298 PNPLA7Q6ZV29 1317 aa17.34■□□□□ 0.37
APOBEC3B-204ENST00000407298 ANKRD36BQ8N2N9 1353 aa17.34■□□□□ 0.37
APOBEC3B-204ENST00000407298 ZCRB1Q8TBF4 217 aaKnown RBP17.34■□□□□ 0.37
APOBEC3B-204ENST00000407298 A0A1W2PP64 1363 aa17.33■□□□□ 0.36
APOBEC3B-204ENST00000407298 FAM208AQ9UK61 1670 aaKnown RBP17.32■□□□□ 0.36
APOBEC3B-204ENST00000407298 HOXC9P31274 260 aa17.31■□□□□ 0.36
APOBEC3B-204ENST00000407298 CCNL1Q9UK58 526 aaPredicted RBP17.31■□□□□ 0.36
APOBEC3B-204ENST00000407298 CGNL1Q0VF96 1302 aa17.3■□□□□ 0.36
APOBEC3B-204ENST00000407298 USP47Q96K76 1375 aa17.29■□□□□ 0.36
APOBEC3B-204ENST00000407298 GOLGB1Q14789 3259 aaKnown RBP17.29■□□□□ 0.36
APOBEC3B-204ENST00000407298 MAP3K19Q56UN5 1328 aa17.29■□□□□ 0.36
APOBEC3B-204ENST00000407298 KCNQ4P56696 695 aa17.29■□□□□ 0.36
APOBEC3B-204ENST00000407298 COL24A1Q17RW2 1714 aa17.28■□□□□ 0.36
APOBEC3B-204ENST00000407298 FLAD1Q8NFF5 587 aa17.28■□□□□ 0.36
APOBEC3B-204ENST00000407298 NLGN2Q8NFZ4 835 aa17.28■□□□□ 0.36
APOBEC3B-204ENST00000407298 RAPGEF4Q8WZA2 1011 aa17.27■□□□□ 0.36
APOBEC3B-204ENST00000407298 RTL1A6NKG5 1358 aa17.26■□□□□ 0.35
APOBEC3B-204ENST00000407298 NSD2O96028 1365 aa17.26■□□□□ 0.35
APOBEC3B-204ENST00000407298 COL23A1Q86Y22 540 aaPredicted RBP17.25■□□□□ 0.35
APOBEC3B-204ENST00000407298 TONSLQ96HA7 1378 aa17.25■□□□□ 0.35
APOBEC3B-204ENST00000407298 LY75O60449 1722 aa17.24■□□□□ 0.35
APOBEC3B-204ENST00000407298 SMG6Q86US8 1419 aaKnown RBP17.24■□□□□ 0.35
APOBEC3B-204ENST00000407298 TATP17735 454 aaPredicted RBP17.24■□□□□ 0.35
APOBEC3B-204ENST00000407298 CD2APQ9Y5K6 639 aa17.24■□□□□ 0.35
APOBEC3B-204ENST00000407298 DOT1LQ8TEK3 1739 aa17.24■□□□□ 0.35
APOBEC3B-204ENST00000407298 NBPF6Q5VWK0 638 aa17.23■□□□□ 0.35
APOBEC3B-204ENST00000407298 NBPF4Q96M43 638 aa17.23■□□□□ 0.35
APOBEC3B-204ENST00000407298 CEP350Q5VT06 3117 aa17.23■□□□□ 0.35
APOBEC3B-204ENST00000407298 ST20-MTHFSA0A0A6YYL1 179 aa17.22■□□□□ 0.35
APOBEC3B-204ENST00000407298 YBX3P16989 372 aaKnown RBP eCLIP17.22■□□□□ 0.352e-7■■■■□ 25.1
APOBEC3B-204ENST00000407298 MEGF6O75095 1541 aa17.21■□□□□ 0.35
APOBEC3B-204ENST00000407298 TUBGCP6Q96RT7 1819 aa17.21■□□□□ 0.35
APOBEC3B-204ENST00000407298 FBLN1P23142 703 aa17.21■□□□□ 0.35
APOBEC3B-204ENST00000407298 TRIM26Q12899 539 aaPredicted RBP17.21■□□□□ 0.35
APOBEC3B-204ENST00000407298 TESK2Q96S53 571 aa17.21■□□□□ 0.35
APOBEC3B-204ENST00000407298 PCDH11XQ9BZA7 1347 aa17.21■□□□□ 0.34
APOBEC3B-204ENST00000407298 PCDH11YQ9BZA8 1340 aa17.21■□□□□ 0.34
APOBEC3B-204ENST00000407298 RRS1Q15050 365 aaKnown RBP17.2■□□□□ 0.34
APOBEC3B-204ENST00000407298 MSL1Q68DK7 614 aa17.2■□□□□ 0.34
APOBEC3B-204ENST00000407298 SMARCC1Q92922 1105 aaPredicted RBP17.2■□□□□ 0.34
APOBEC3B-204ENST00000407298 IFFO2Q5TF58 517 aa17.19■□□□□ 0.34
APOBEC3B-204ENST00000407298 FYB1O15117 783 aa17.18■□□□□ 0.34
APOBEC3B-204ENST00000407298 USHBP1Q8N6Y0 703 aa17.18■□□□□ 0.34
APOBEC3B-204ENST00000407298 GPBP1L1Q9HC44 474 aaPredicted RBP17.18■□□□□ 0.34
APOBEC3B-204ENST00000407298 SHANK3Q9BYB0 1731 aa17.18■□□□□ 0.34
APOBEC3B-204ENST00000407298 PALLDQ8WX93 1383 aa17.17■□□□□ 0.34
APOBEC3B-204ENST00000407298 TMF1P82094 1093 aa17.17■□□□□ 0.34
APOBEC3B-204ENST00000407298 MPRIPQ6WCQ1 1025 aa17.17■□□□□ 0.34
APOBEC3B-204ENST00000407298 AK7Q96M32 723 aa17.17■□□□□ 0.34
APOBEC3B-204ENST00000407298 RGPD2P0DJD1 1756 aa17.17■□□□□ 0.34
APOBEC3B-204ENST00000407298 INSRP06213 1382 aa17.16■□□□□ 0.34
APOBEC3B-204ENST00000407298 KIF24Q5T7B8 1368 aa17.16■□□□□ 0.34
APOBEC3B-204ENST00000407298 NSD3Q9BZ95 1437 aa17.16■□□□□ 0.34
APOBEC3B-204ENST00000407298 CDCA8Q53HL2 280 aa17.16■□□□□ 0.34
APOBEC3B-204ENST00000407298 GGNBP2Q9H3C7 697 aa17.16■□□□□ 0.34
APOBEC3B-204ENST00000407298 ATP10DQ9P241 1426 aa17.15■□□□□ 0.34
APOBEC3B-204ENST00000407298 HSP90AB2PQ58FF8 381 aa17.14■□□□□ 0.33
APOBEC3B-204ENST00000407298 FLT4P35916 1363 aa17.14■□□□□ 0.33
APOBEC3B-204ENST00000407298 C5P01031 1676 aa17.13■□□□□ 0.33
APOBEC3B-204ENST00000407298 SPG7Q9UQ90 795 aa17.12■□□□□ 0.33
APOBEC3B-204ENST00000407298 CYP27B1O15528 508 aa17.11■□□□□ 0.33
APOBEC3B-204ENST00000407298 SSFA2P28290 1259 aa17.11■□□□□ 0.33
APOBEC3B-204ENST00000407298 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.1■□□□□ 0.33
APOBEC3B-204ENST00000407298 HSPA6P17066 643 aa17.1■□□□□ 0.33
APOBEC3B-204ENST00000407298 NKX1-1Q15270 411 aaPredicted RBP17.1■□□□□ 0.33
APOBEC3B-204ENST00000407298 PIGBQ92521 554 aa17.1■□□□□ 0.33
APOBEC3B-204ENST00000407298 PHF14O94880 888 aa17.09■□□□□ 0.33
APOBEC3B-204ENST00000407298 IGSF1Q8N6C5 1336 aa17.09■□□□□ 0.33
APOBEC3B-204ENST00000407298 TAF1LQ8IZX4 1826 aa17.09■□□□□ 0.33
APOBEC3B-204ENST00000407298 C4BP0C0L5 1744 aa17.08■□□□□ 0.32
APOBEC3B-204ENST00000407298 ADCY9O60503 1353 aa17.08■□□□□ 0.32
APOBEC3B-204ENST00000407298 LOC102724428A0A0B4J2F2 783 aa17.08■□□□□ 0.32
APOBEC3B-204ENST00000407298 SIK1P57059 783 aa17.08■□□□□ 0.32
APOBEC3B-204ENST00000407298 ZNF526Q8TF50 670 aaPredicted RBP17.08■□□□□ 0.32
APOBEC3B-204ENST00000407298 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.08■□□□□ 0.32
APOBEC3B-204ENST00000407298 TMOD3Q9NYL9 352 aa17.07■□□□□ 0.32
APOBEC3B-204ENST00000407298 PPM1GO15355 546 aaPredicted RBP17.06■□□□□ 0.32
APOBEC3B-204ENST00000407298 GNPATO15228 680 aa17.04■□□□□ 0.32
APOBEC3B-204ENST00000407298 IFNL2Q8IZJ0 200 aa17.04■□□□□ 0.32
APOBEC3B-204ENST00000407298 LINC00116Q8NCU8 138 aa17.04■□□□□ 0.32
APOBEC3B-204ENST00000407298 EMILIN1Q9Y6C2 1016 aa17.04■□□□□ 0.32
APOBEC3B-204ENST00000407298 ITGB4P16144 1822 aa17.04■□□□□ 0.32
APOBEC3B-204ENST00000407298 WASHC2AQ641Q2 1341 aa17.03■□□□□ 0.32
APOBEC3B-204ENST00000407298 ATP6V1AP38606 617 aa17.03■□□□□ 0.32
APOBEC3B-204ENST00000407298 AMIGO3Q86WK7 504 aa17.03■□□□□ 0.32
APOBEC3B-204ENST00000407298 KIF20BQ96Q89 1820 aa17.03■□□□□ 0.32
APOBEC3B-204ENST00000407298 UBR3Q6ZT12 1888 aa17.02■□□□□ 0.32
APOBEC3B-204ENST00000407298 TGFB2P61812 414 aa17.02■□□□□ 0.32
APOBEC3B-204ENST00000407298 PKD1L3Q7Z443 1732 aa17.01■□□□□ 0.31
APOBEC3B-204ENST00000407298 MMP10P09238 476 aa17.01■□□□□ 0.31
APOBEC3B-204ENST00000407298 NLGN1Q8N2Q7 840 aa17.01■□□□□ 0.31
APOBEC3B-204ENST00000407298 WWC3Q9ULE0 1092 aa17.01■□□□□ 0.31
APOBEC3B-204ENST00000407298 ASAP1Q9ULH1 1129 aa17.01■□□□□ 0.31
APOBEC3B-204ENST00000407298 NCAPD2Q15021 1401 aa17.01■□□□□ 0.31
APOBEC3B-204ENST00000407298 TRAPPC3LQ5T215 181 aa17■□□□□ 0.31
APOBEC3B-204ENST00000407298 SMIM5Q71RC9 77 aa17■□□□□ 0.31
APOBEC3B-204ENST00000407298 EYA1Q99502 592 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms