RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 LRRC37A3O60309 1634 aa14.15□□□□□ -0.14
FAM49A-202ENST00000406434 CNGB1Q14028 1251 aaPredicted RBP14.15□□□□□ -0.14
FAM49A-202ENST00000406434 POLKQ9UBT6 870 aa14.15□□□□□ -0.14
FAM49A-202ENST00000406434 MAP2P11137 1827 aaKnown RBP14.15□□□□□ -0.14
FAM49A-202ENST00000406434 RGPD2P0DJD1 1756 aa14.15□□□□□ -0.14
FAM49A-202ENST00000406434 FLT4P35916 1363 aa14.14□□□□□ -0.15
FAM49A-202ENST00000406434 WNK3Q9BYP7 1800 aa14.14□□□□□ -0.15
FAM49A-202ENST00000406434 PTF1AQ7RTS3 328 aa14.14□□□□□ -0.15
FAM49A-202ENST00000406434 ACSBG1Q96GR2 724 aa14.14□□□□□ -0.15
FAM49A-202ENST00000406434 CAMKK2Q96RR4 588 aa14.14□□□□□ -0.15
FAM49A-202ENST00000406434 SMG6Q86US8 1419 aaKnown RBP14.14□□□□□ -0.15
FAM49A-202ENST00000406434 INSRP06213 1382 aa14.14□□□□□ -0.15
FAM49A-202ENST00000406434 SPDYE4A6NLX3 237 aa14.13□□□□□ -0.15
FAM49A-202ENST00000406434 DSG3P32926 999 aa14.12□□□□□ -0.15
FAM49A-202ENST00000406434 RAPGEF4Q8WZA2 1011 aa14.12□□□□□ -0.15
FAM49A-202ENST00000406434 BCL11BQ9C0K0 894 aaPredicted RBP14.12□□□□□ -0.15
FAM49A-202ENST00000406434 KIF24Q5T7B8 1368 aa14.12□□□□□ -0.15
FAM49A-202ENST00000406434 WASHC2AQ641Q2 1341 aa14.12□□□□□ -0.15
FAM49A-202ENST00000406434 PSDA5PKW4 1024 aaPredicted RBP14.11□□□□□ -0.15
FAM49A-202ENST00000406434 KCNQ2O43526 872 aa14.11□□□□□ -0.15
FAM49A-202ENST00000406434 TATP17735 454 aaPredicted RBP14.11□□□□□ -0.15
FAM49A-202ENST00000406434 ZCRB1Q8TBF4 217 aaKnown RBP14.11□□□□□ -0.15
FAM49A-202ENST00000406434 TNS2Q63HR2 1409 aa14.11□□□□□ -0.15
FAM49A-202ENST00000406434 PEAK1Q9H792 1746 aa14.11□□□□□ -0.15
FAM49A-202ENST00000406434 TNS1Q9HBL0 1735 aaKnown RBP14.11□□□□□ -0.15
FAM49A-202ENST00000406434 FAM208AQ9UK61 1670 aaKnown RBP14.1□□□□□ -0.15
FAM49A-202ENST00000406434 SBF2Q86WG5 1849 aa14.1□□□□□ -0.15
FAM49A-202ENST00000406434 AMER1Q5JTC6 1135 aaPredicted RBP14.09□□□□□ -0.15
FAM49A-202ENST00000406434 CC2D1BQ5T0F9 858 aaKnown RBP14.09□□□□□ -0.15
FAM49A-202ENST00000406434 EYA1Q99502 592 aa14.09□□□□□ -0.15
FAM49A-202ENST00000406434 ANKRD26Q9UPS8 1709 aa14.08□□□□□ -0.15
FAM49A-202ENST00000406434 NSD2O96028 1365 aa14.08□□□□□ -0.15
FAM49A-202ENST00000406434 PLSCR1O15162 318 aa14.08□□□□□ -0.16
FAM49A-202ENST00000406434 PER1O15534 1290 aaPredicted RBP14.08□□□□□ -0.16
FAM49A-202ENST00000406434 EIF4A2Q14240 407 aaKnown RBP14.08□□□□□ -0.16
FAM49A-202ENST00000406434 R3HDM1Q15032 1099 aaKnown RBP14.08□□□□□ -0.16
FAM49A-202ENST00000406434 SYTL4Q96C24 671 aaPredicted RBP14.08□□□□□ -0.16
FAM49A-202ENST00000406434 NBPF14Q5TI25 921 aa14.07□□□□□ -0.16
FAM49A-202ENST00000406434 MEGF6O75095 1541 aa14.06□□□□□ -0.16
FAM49A-202ENST00000406434 BCL9O00512 1426 aa14.06□□□□□ -0.16
FAM49A-202ENST00000406434 PARD3Q8TEW0 1356 aa14.06□□□□□ -0.16
FAM49A-202ENST00000406434 PROM2Q8N271 834 aa14.06□□□□□ -0.16
FAM49A-202ENST00000406434 ZBTB12Q9Y330 459 aaPredicted RBP14.06□□□□□ -0.16
FAM49A-202ENST00000406434 PRIM1P49642 420 aaKnown RBP14.05□□□□□ -0.16
FAM49A-202ENST00000406434 MTHFSP49914 203 aa14.03□□□□□ -0.16
FAM49A-202ENST00000406434 TXNRD1Q16881 649 aa14.03□□□□□ -0.16
FAM49A-202ENST00000406434 SPG7Q9UQ90 795 aa14.03□□□□□ -0.16
FAM49A-202ENST00000406434 RTN4Q9NQC3 1192 aaKnown RBP14.02□□□□□ -0.17
FAM49A-202ENST00000406434 CYP27B1O15528 508 aa14.01□□□□□ -0.17
FAM49A-202ENST00000406434 PCDH11XQ9BZA7 1347 aa14.01□□□□□ -0.17
FAM49A-202ENST00000406434 PCDH11YQ9BZA8 1340 aa14.01□□□□□ -0.17
FAM49A-202ENST00000406434 SULT6B1Q6IMI4 303 aa13.99□□□□□ -0.17
FAM49A-202ENST00000406434 NHSQ6T4R5 1651 aa13.99□□□□□ -0.17
FAM49A-202ENST00000406434 IL13P35225 146 aa13.98□□□□□ -0.17
FAM49A-202ENST00000406434 MPRIPQ6WCQ1 1025 aa13.98□□□□□ -0.17
FAM49A-202ENST00000406434 STK32BQ9NY57 414 aa13.98□□□□□ -0.17
FAM49A-202ENST00000406434 RREB1Q92766 1687 aa13.98□□□□□ -0.17
FAM49A-202ENST00000406434 IGSF1Q8N6C5 1336 aa13.98□□□□□ -0.17
FAM49A-202ENST00000406434 NUP188Q5SRE5 1749 aa13.98□□□□□ -0.17
FAM49A-202ENST00000406434 SHANK3Q9BYB0 1731 aa13.98□□□□□ -0.17
FAM49A-202ENST00000406434 BTAF1O14981 1849 aa13.98□□□□□ -0.17
FAM49A-202ENST00000406434 PLEKHO1Q53GL0 409 aaPredicted RBP13.97□□□□□ -0.17
FAM49A-202ENST00000406434 AEBP1Q8IUX7 1158 aa13.97□□□□□ -0.17
FAM49A-202ENST00000406434 IFNL2Q8IZJ0 200 aa13.97□□□□□ -0.17
FAM49A-202ENST00000406434 ANO8Q9HCE9 1232 aaPredicted RBP13.97□□□□□ -0.17
FAM49A-202ENST00000406434 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.97□□□□□ -0.17
FAM49A-202ENST00000406434 DIAPH1O60610 1272 aaKnown RBP13.96□□□□□ -0.17
FAM49A-202ENST00000406434 KCNQ4P56696 695 aa13.96□□□□□ -0.17
FAM49A-202ENST00000406434 HMOX1P09601 288 aa13.96□□□□□ -0.18
FAM49A-202ENST00000406434 NPC1L1Q9UHC9 1359 aa13.96□□□□□ -0.18
FAM49A-202ENST00000406434 NCAPD2Q15021 1401 aa13.96□□□□□ -0.18
FAM49A-202ENST00000406434 DOT1LQ8TEK3 1739 aa13.95□□□□□ -0.18
FAM49A-202ENST00000406434 PHKG2P15735 406 aa13.95□□□□□ -0.18
FAM49A-202ENST00000406434 NKX1-1Q15270 411 aaPredicted RBP13.95□□□□□ -0.18
FAM49A-202ENST00000406434 SLC15A2Q16348 729 aa13.95□□□□□ -0.18
FAM49A-202ENST00000406434 ZNF530Q6P9A1 599 aaPredicted RBP13.95□□□□□ -0.18
FAM49A-202ENST00000406434 LRRC4BQ9NT99 713 aa13.95□□□□□ -0.18
FAM49A-202ENST00000406434 RGPD3A6NKT7 1758 aaPredicted RBP13.94□□□□□ -0.18
FAM49A-202ENST00000406434 RGPD4Q7Z3J3 1758 aa13.94□□□□□ -0.18
FAM49A-202ENST00000406434 U2SURPO15042 1029 aaKnown RBP13.94□□□□□ -0.18
FAM49A-202ENST00000406434 AMOTQ4VCS5 1084 aa13.94□□□□□ -0.18
FAM49A-202ENST00000406434 C1orf141Q5JVX7 400 aa13.93□□□□□ -0.18
FAM49A-202ENST00000406434 SLC27A3Q5K4L6 730 aa13.93□□□□□ -0.18
FAM49A-202ENST00000406434 PIGBQ92521 554 aa13.93□□□□□ -0.18
FAM49A-202ENST00000406434 PDGFDQ9GZP0 370 aaPredicted RBP13.93□□□□□ -0.18
FAM49A-202ENST00000406434 CCNL1Q9UK58 526 aaPredicted RBP13.93□□□□□ -0.18
FAM49A-202ENST00000406434 PKD1L3Q7Z443 1732 aa13.92□□□□□ -0.18
FAM49A-202ENST00000406434 CACNB1Q02641 598 aaPredicted RBP13.92□□□□□ -0.18
FAM49A-202ENST00000406434 DDX10Q13206 875 aaKnown RBP13.92□□□□□ -0.18
FAM49A-202ENST00000406434 CFAP53Q96M91 514 aa13.92□□□□□ -0.18
FAM49A-202ENST00000406434 TMOD3Q9NYL9 352 aa13.92□□□□□ -0.18
FAM49A-202ENST00000406434 HSP90AB1P08238 724 aaKnown RBP13.91□□□□□ -0.18
FAM49A-202ENST00000406434 PPP2R1AP30153 589 aa13.91□□□□□ -0.18
FAM49A-202ENST00000406434 ZEB1P37275 1124 aaPredicted RBP13.91□□□□□ -0.18
FAM49A-202ENST00000406434 ZBTB7AO95365 584 aa13.9□□□□□ -0.18
FAM49A-202ENST00000406434 ZNF827Q17R98 1081 aa13.9□□□□□ -0.18
FAM49A-202ENST00000406434 SMARCC1Q92922 1105 aaPredicted RBP13.9□□□□□ -0.18
FAM49A-202ENST00000406434 SPON1Q9HCB6 807 aa13.9□□□□□ -0.18
FAM49A-202ENST00000406434 ITGB4P16144 1822 aa13.9□□□□□ -0.18
FAM49A-202ENST00000406434 SRCAPQ6ZRS2 3230 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms