RNA–Protein interactions for RNA: ENST00000406381.6

ERBB2-202, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-202ENST00000406381 TMX3Q96JJ7 454 aa15.25■□□□□ 0.03
ERBB2-202ENST00000406381 PRAM1Q96QH2 718 aa15.25■□□□□ 0.03
ERBB2-202ENST00000406381 RBM25P49756 843 aaKnown RBP15.25■□□□□ 0.03
ERBB2-202ENST00000406381 TTC12Q9H892 705 aaPredicted RBP15.25■□□□□ 0.03
ERBB2-202ENST00000406381 SH2B1Q9NRF2 756 aaPredicted RBP15.25■□□□□ 0.03
ERBB2-202ENST00000406381 DHX16O60231 1041 aaKnown RBP15.24■□□□□ 0.03
ERBB2-202ENST00000406381 TTLL5Q6EMB2 1281 aa15.24■□□□□ 0.03
ERBB2-202ENST00000406381 CYB5RLQ6IPT4 315 aa15.24■□□□□ 0.03
ERBB2-202ENST00000406381 NFXL1Q6ZNB6 911 aa15.24■□□□□ 0.03
ERBB2-202ENST00000406381 CBFA2T2O43439 604 aa15.24■□□□□ 0.03
ERBB2-202ENST00000406381 JMYQ8N9B5 988 aa15.24■□□□□ 0.03
ERBB2-202ENST00000406381 STX6O43752 255 aa15.24■□□□□ 0.03
ERBB2-202ENST00000406381 TNNQ9UQP3 1299 aa15.24■□□□□ 0.03
ERBB2-202ENST00000406381 IL16Q14005 1332 aa15.23■□□□□ 0.03
ERBB2-202ENST00000406381 OSCARQ8IYS5 282 aa15.23■□□□□ 0.03
ERBB2-202ENST00000406381 KRT222Q8N1A0 295 aa15.23■□□□□ 0.03
ERBB2-202ENST00000406381 EID1Q9Y6B2 187 aa15.23■□□□□ 0.03
ERBB2-202ENST00000406381 RDXP35241 583 aaKnown RBP15.23■□□□□ 0.03
ERBB2-202ENST00000406381 FILIP1LQ4L180 1135 aa15.23■□□□□ 0.03
ERBB2-202ENST00000406381 AXDND1Q5T1B0 1012 aaPredicted RBP15.23■□□□□ 0.03
ERBB2-202ENST00000406381 CKAP2LQ8IYA6 745 aa15.23■□□□□ 0.03
ERBB2-202ENST00000406381 BIVM-ERCC5R4GMW8 1640 aa15.23■□□□□ 0.03
ERBB2-202ENST00000406381 SRGAP3O43295 1099 aa15.23■□□□□ 0.03
ERBB2-202ENST00000406381 HDGFL1Q5TGJ6 251 aa15.23■□□□□ 0.03
ERBB2-202ENST00000406381 SMARCE1Q969G3 411 aa15.23■□□□□ 0.03
ERBB2-202ENST00000406381 TIGD1Q96MW7 591 aa15.23■□□□□ 0.03
ERBB2-202ENST00000406381 NEUROD6Q96NK8 337 aa15.23■□□□□ 0.03
ERBB2-202ENST00000406381 DDX19AQ9NUU7 478 aaKnown RBP15.23■□□□□ 0.03
ERBB2-202ENST00000406381 CCDC141Q6ZP82 1450 aa15.23■□□□□ 0.03
ERBB2-202ENST00000406381 CCDC47Q96A33 483 aaKnown RBP15.22■□□□□ 0.03
ERBB2-202ENST00000406381 DEF6Q9H4E7 631 aa15.22■□□□□ 0.03
ERBB2-202ENST00000406381 CAGE1Q8TC20 777 aa15.22■□□□□ 0.03
ERBB2-202ENST00000406381 BMS1Q14692 1282 aaKnown RBP15.22■□□□□ 0.03
ERBB2-202ENST00000406381 ANO10Q9NW15 660 aa15.22■□□□□ 0.03
ERBB2-202ENST00000406381 ATAD2Q6PL18 1390 aa15.22■□□□□ 0.03
ERBB2-202ENST00000406381 CDR1P51861 262 aa15.22■□□□□ 0.03
ERBB2-202ENST00000406381 BBXQ8WY36 941 aaPredicted RBP15.22■□□□□ 0.03
ERBB2-202ENST00000406381 TESK2Q96S53 571 aa15.22■□□□□ 0.03
ERBB2-202ENST00000406381 SPINK5Q9NQ38 1064 aaPredicted RBP15.22■□□□□ 0.03
ERBB2-202ENST00000406381 SMTNL1A8MU46 457 aa15.21■□□□□ 0.03
ERBB2-202ENST00000406381 ZNF165P49910 485 aa15.21■□□□□ 0.03
ERBB2-202ENST00000406381 ARHGAP45Q92619 1136 aa15.21■□□□□ 0.03
ERBB2-202ENST00000406381 TRMT1Q9NXH9 659 aaKnown RBP15.21■□□□□ 0.03
ERBB2-202ENST00000406381 SCAF11Q99590 1463 aaKnown RBP15.21■□□□□ 0.03
ERBB2-202ENST00000406381 SKIDA1Q1XH10 827 aa15.21■□□□□ 0.03
ERBB2-202ENST00000406381 RIC3Q7Z5B4 369 aa15.21■□□□□ 0.03
ERBB2-202ENST00000406381 TRERF1Q96PN7 1200 aa15.21■□□□□ 0.03
ERBB2-202ENST00000406381 KRT32Q14532 448 aa15.21■□□□□ 0.03
ERBB2-202ENST00000406381 GIMAP6Q6P9H5 292 aa15.21■□□□□ 0.03
ERBB2-202ENST00000406381 RBSNQ9H1K0 784 aa15.21■□□□□ 0.03
ERBB2-202ENST00000406381 CDK19Q9BWU1 502 aa15.21■□□□□ 0.02
ERBB2-202ENST00000406381 CAVIN2O95810 425 aa15.2■□□□□ 0.02
ERBB2-202ENST00000406381 SDSP20132 328 aa15.2■□□□□ 0.02
ERBB2-202ENST00000406381 WASHC4Q2M389 1173 aa15.2■□□□□ 0.02
ERBB2-202ENST00000406381 URI1O94763 535 aaPredicted RBP15.2■□□□□ 0.02
ERBB2-202ENST00000406381 ZNF445P59923 1031 aa15.2■□□□□ 0.02
ERBB2-202ENST00000406381 NUTM1Q86Y26 1132 aa15.2■□□□□ 0.02
ERBB2-202ENST00000406381 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.2■□□□□ 0.02
ERBB2-202ENST00000406381 NOL10Q9BSC4 688 aaKnown RBP15.2■□□□□ 0.02
ERBB2-202ENST00000406381 GTF2F1P35269 517 aaKnown RBP eCLIP15.19■□□□□ 0.02
ERBB2-202ENST00000406381 AIMP1Q12904 312 aaKnown RBP15.19■□□□□ 0.02
ERBB2-202ENST00000406381 CEP135Q66GS9 1140 aa15.19■□□□□ 0.02
ERBB2-202ENST00000406381 PPFIBP1Q86W92 1011 aa15.19■□□□□ 0.02
ERBB2-202ENST00000406381 POLR3GO15318 223 aaPredicted RBP15.19■□□□□ 0.02
ERBB2-202ENST00000406381 GLRX3O76003 335 aaKnown RBP15.19■□□□□ 0.02
ERBB2-202ENST00000406381 USP48Q86UV5 1035 aa15.19■□□□□ 0.02
ERBB2-202ENST00000406381 KIF1BPQ96EK5 621 aa15.19■□□□□ 0.02
ERBB2-202ENST00000406381 CTAGE5O15320 804 aa15.19■□□□□ 0.02
ERBB2-202ENST00000406381 KIF20AO95235 890 aa15.19■□□□□ 0.02
ERBB2-202ENST00000406381 USP8P40818 1118 aa15.19■□□□□ 0.02
ERBB2-202ENST00000406381 DNAJC2Q99543 621 aaKnown RBP15.19■□□□□ 0.02
ERBB2-202ENST00000406381 FEZ1Q99689 392 aa15.19■□□□□ 0.02
ERBB2-202ENST00000406381 INSRP06213 1382 aa15.18■□□□□ 0.02
ERBB2-202ENST00000406381 GSDMDP57764 484 aa15.18■□□□□ 0.02
ERBB2-202ENST00000406381 PRPF40BQ6NWY9 871 aaKnown RBP15.18■□□□□ 0.02
ERBB2-202ENST00000406381 ASXL1Q8IXJ9 1541 aa15.18■□□□□ 0.02
ERBB2-202ENST00000406381 ZSCAN12O43309 604 aa15.18■□□□□ 0.02
ERBB2-202ENST00000406381 CFAP100Q494V2 611 aa15.18■□□□□ 0.02
ERBB2-202ENST00000406381 TTC5Q8N0Z6 440 aa15.18■□□□□ 0.02
ERBB2-202ENST00000406381 ZBTB40Q9NUA8 1239 aa15.18■□□□□ 0.02
ERBB2-202ENST00000406381 UGGT2Q9NYU1 1516 aa15.18■□□□□ 0.02
ERBB2-202ENST00000406381 DNMBPQ6XZF7 1577 aa15.18■□□□□ 0.02
ERBB2-202ENST00000406381 RPGRIP1LQ68CZ1 1315 aa15.18■□□□□ 0.02
ERBB2-202ENST00000406381 CCDC186Q7Z3E2 898 aa15.18■□□□□ 0.02
ERBB2-202ENST00000406381 CCDC102AQ96A19 550 aa15.18■□□□□ 0.02
ERBB2-202ENST00000406381 FSD2A1L4K1 749 aa15.17■□□□□ 0.02
ERBB2-202ENST00000406381 ZSCAN22P10073 491 aaPredicted RBP15.17■□□□□ 0.02
ERBB2-202ENST00000406381 FAM200AQ8TCP9 573 aa15.17■□□□□ 0.02
ERBB2-202ENST00000406381 CEP89Q96ST8 783 aa15.17■□□□□ 0.02
ERBB2-202ENST00000406381 ERICH2A1L162 156 aa15.17■□□□□ 0.02
ERBB2-202ENST00000406381 RAB11FIP3O75154 756 aa15.17■□□□□ 0.02
ERBB2-202ENST00000406381 BRPF1P55201 1214 aaPredicted RBP15.17■□□□□ 0.02
ERBB2-202ENST00000406381 PIK3C2GO75747 1445 aa15.17■□□□□ 0.02
ERBB2-202ENST00000406381 NAP1L1P55209 391 aaKnown RBP15.17■□□□□ 0.02
ERBB2-202ENST00000406381 DDX11Q96FC9 970 aa15.17■□□□□ 0.02
ERBB2-202ENST00000406381 DACH1Q9UI36 760 aa15.17■□□□□ 0.02
ERBB2-202ENST00000406381 CUL7Q14999 1698 aa15.16■□□□□ 0.02
ERBB2-202ENST00000406381 ANAPC15P60006 121 aa15.16■□□□□ 0.02
ERBB2-202ENST00000406381 ZGPATQ8N5A5 531 aaKnown RBP15.16■□□□□ 0.02
ERBB2-202ENST00000406381 POLR3AO14802 1390 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms