RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 MCM10Q7L590 875 aa37.16■■■■□ 3.54
CSNK1E-205ENST00000405675 DZIP1LQ8IYY4 767 aaKnown RBP37.16■■■■□ 3.54
CSNK1E-205ENST00000405675 IGHDP01880 384 aa37.13■■■■□ 3.54
CSNK1E-205ENST00000405675 MVPQ14764 893 aaKnown RBP37.12■■■■□ 3.53
CSNK1E-205ENST00000405675 ATF7IPQ6VMQ6 1270 aa37.12■■■■□ 3.53
CSNK1E-205ENST00000405675 FTSJ3Q8IY81 847 aaKnown RBP37.12■■■■□ 3.53
CSNK1E-205ENST00000405675 AXIN2Q9Y2T1 843 aa37.12■■■■□ 3.53
CSNK1E-205ENST00000405675 ELL2O00472 640 aaPredicted RBP37.11■■■■□ 3.53
CSNK1E-205ENST00000405675 C8orf58Q8NAV2 365 aa37.11■■■■□ 3.53
CSNK1E-205ENST00000405675 NHSL1Q5SYE7 1610 aa37.11■■■■□ 3.53
CSNK1E-205ENST00000405675 ZNF428Q96B54 188 aa37.1■■■■□ 3.53
CSNK1E-205ENST00000405675 KIF16BQ96L93 1317 aa37.08■■■■□ 3.53
CSNK1E-205ENST00000405675 MS4A1P11836 297 aa37.08■■■■□ 3.53
CSNK1E-205ENST00000405675 AEBP2Q6ZN18 517 aaPredicted RBP37.08■■■■□ 3.53
CSNK1E-205ENST00000405675 USHBP1Q8N6Y0 703 aa37.08■■■■□ 3.53
CSNK1E-205ENST00000405675 NBPF6Q5VWK0 638 aa37.07■■■■□ 3.53
CSNK1E-205ENST00000405675 NBPF4Q96M43 638 aa37.07■■■■□ 3.53
CSNK1E-205ENST00000405675 CRYBG1Q9Y4K1 1723 aa37.07■■■■□ 3.52
CSNK1E-205ENST00000405675 AAMPQ13685 434 aa37.07■■■■□ 3.52
CSNK1E-205ENST00000405675 PCDHB15Q9Y5E8 787 aa37.07■■■■□ 3.52
CSNK1E-205ENST00000405675 CRB1P82279 1406 aa37.06■■■■□ 3.52
CSNK1E-205ENST00000405675 BRPF1P55201 1214 aaPredicted RBP37.06■■■■□ 3.52
CSNK1E-205ENST00000405675 TWISTNBQ3B726 338 aaPredicted RBP37.06■■■■□ 3.52
CSNK1E-205ENST00000405675 CHL1O00533 1208 aa37.06■■■■□ 3.52
CSNK1E-205ENST00000405675 MRPL50Q8N5N7 158 aaKnown RBP37.05■■■■□ 3.52
CSNK1E-205ENST00000405675 LRRC59Q96AG4 307 aaKnown RBP37.05■■■■□ 3.52
CSNK1E-205ENST00000405675 ANKRD24Q8TF21 1146 aa37.04■■■■□ 3.52
CSNK1E-205ENST00000405675 ROBO1Q9Y6N7 1651 aa37.04■■■■□ 3.52
CSNK1E-205ENST00000405675 IPO8O15397 1037 aaKnown RBP37.03■■■■□ 3.52
CSNK1E-205ENST00000405675 GAS2L2Q8NHY3 880 aa37.03■■■■□ 3.52
CSNK1E-205ENST00000405675 CHRNA2Q15822 529 aa37■■■■□ 3.51
CSNK1E-205ENST00000405675 TMEM57Q8N5G2 664 aa37■■■■□ 3.51
CSNK1E-205ENST00000405675 KIAA0232Q92628 1395 aa36.99■■■■□ 3.51
CSNK1E-205ENST00000405675 KRT24Q2M2I5 525 aa36.99■■■■□ 3.51
CSNK1E-205ENST00000405675 ITPRIPQ8IWB1 547 aa36.98■■■■□ 3.51
CSNK1E-205ENST00000405675 RGPD2P0DJD1 1756 aa36.98■■■■□ 3.51
CSNK1E-205ENST00000405675 RGPD5Q99666 1765 aa36.98■■■■□ 3.51
CSNK1E-205ENST00000405675 RTF1Q92541 710 aaKnown RBP36.98■■■■□ 3.51
CSNK1E-205ENST00000405675 CPDO75976 1380 aa36.96■■■■□ 3.51
CSNK1E-205ENST00000405675 PDE4AP27815 886 aa36.95■■■■□ 3.51
CSNK1E-205ENST00000405675 MIS18AQ9NYP9 233 aa36.95■■■■□ 3.51
CSNK1E-205ENST00000405675 ERBB3P21860 1342 aa36.95■■■■□ 3.51
CSNK1E-205ENST00000405675 COL18A1P39060 1754 aa36.95■■■■□ 3.51
CSNK1E-205ENST00000405675 DDX19BQ9UMR2 479 aa36.95■■■■□ 3.51
CSNK1E-205ENST00000405675 HAP1P54257 671 aaPredicted RBP36.94■■■■□ 3.5
CSNK1E-205ENST00000405675 GNAT3A8MTJ3 354 aa36.91■■■■□ 3.5
CSNK1E-205ENST00000405675 HTATSF1O43719 755 aaKnown RBP36.91■■■■□ 3.5
CSNK1E-205ENST00000405675 ARHGAP45Q92619 1136 aa36.91■■■■□ 3.5
CSNK1E-205ENST00000405675 BACH2Q9BYV9 841 aa36.91■■■■□ 3.5
CSNK1E-205ENST00000405675 AHDC1Q5TGY3 1603 aaPredicted RBP36.9■■■■□ 3.5
CSNK1E-205ENST00000405675 RGS3P49796 1198 aa36.88■■■■□ 3.49
CSNK1E-205ENST00000405675 PRDM11Q9NQV5 511 aa36.88■■■■□ 3.49
CSNK1E-205ENST00000405675 TOM1O60784 492 aa36.88■■■■□ 3.49
CSNK1E-205ENST00000405675 LRRC37A3O60309 1634 aa36.88■■■■□ 3.49
CSNK1E-205ENST00000405675 NCAPD2Q15021 1401 aa36.87■■■■□ 3.49
CSNK1E-205ENST00000405675 MAP3K5Q99683 1374 aa36.87■■■■□ 3.49
CSNK1E-205ENST00000405675 ABCA3Q99758 1704 aa36.87■■■■□ 3.49
CSNK1E-205ENST00000405675 PIP4K2BP78356 416 aa36.86■■■■□ 3.49
CSNK1E-205ENST00000405675 TSPYL4Q9UJ04 414 aa36.86■■■■□ 3.49
CSNK1E-205ENST00000405675 IL17REQ8NFR9 667 aa36.85■■■■□ 3.49
CSNK1E-205ENST00000405675 ZBTB40Q9NUA8 1239 aa36.85■■■■□ 3.49
CSNK1E-205ENST00000405675 ABCC6O95255 1503 aa36.85■■■■□ 3.49
CSNK1E-205ENST00000405675 RWDD1Q9H446 243 aaPredicted RBP36.84■■■■□ 3.49
CSNK1E-205ENST00000405675 NLRP2Q9NX02 1062 aa36.84■■■■□ 3.49
CSNK1E-205ENST00000405675 CSB-PGBD3P0DP91 1061 aa36.83■■■■□ 3.49
CSNK1E-205ENST00000405675 CAMTA1Q9Y6Y1 1673 aa36.83■■■■□ 3.49
CSNK1E-205ENST00000405675 ABCC4O15439 1325 aa36.81■■■■□ 3.48
CSNK1E-205ENST00000405675 LMO7Q8WWI1 1683 aa36.79■■■■□ 3.48
CSNK1E-205ENST00000405675 MSH5O43196 834 aa36.79■■■■□ 3.48
CSNK1E-205ENST00000405675 UBAP1LF5GYI3 381 aa36.78■■■■□ 3.48
CSNK1E-205ENST00000405675 API5Q9BZZ5 524 aaKnown RBP36.77■■■■□ 3.48
CSNK1E-205ENST00000405675 ZBTB7BO15156 539 aaPredicted RBP36.74■■■■□ 3.47
CSNK1E-205ENST00000405675 HDAC1Q13547 482 aaPredicted RBP36.74■■■■□ 3.47
CSNK1E-205ENST00000405675 PLEKHO1Q53GL0 409 aaPredicted RBP36.74■■■■□ 3.47
CSNK1E-205ENST00000405675 PDZRN3Q9UPQ7 1066 aa36.74■■■■□ 3.47
CSNK1E-205ENST00000405675 PHLPP1O60346 1717 aa36.74■■■■□ 3.47
CSNK1E-205ENST00000405675 RGS12O14924 1447 aa36.71■■■■□ 3.47
CSNK1E-205ENST00000405675 AMOTQ4VCS5 1084 aa36.71■■■■□ 3.47
CSNK1E-205ENST00000405675 COL16A1Q07092 1604 aaPredicted RBP36.71■■■■□ 3.47
CSNK1E-205ENST00000405675 TAF7Q15545 349 aaPredicted RBP36.7■■■■□ 3.47
CSNK1E-205ENST00000405675 FAM208AQ9UK61 1670 aaKnown RBP36.7■■■■□ 3.47
CSNK1E-205ENST00000405675 CEMIPQ8WUJ3 1361 aa36.69■■■■□ 3.46
CSNK1E-205ENST00000405675 C8orf34Q49A92 452 aa36.69■■■■□ 3.46
CSNK1E-205ENST00000405675 ZNF530Q6P9A1 599 aaPredicted RBP36.69■■■■□ 3.46
CSNK1E-205ENST00000405675 RAPGEF4Q8WZA2 1011 aa36.68■■■■□ 3.46
CSNK1E-205ENST00000405675 LGR6Q9HBX8 967 aa36.68■■■■□ 3.46
CSNK1E-205ENST00000405675 COL5A2P05997 1499 aaPredicted RBP36.68■■■■□ 3.46
CSNK1E-205ENST00000405675 WDR17Q8IZU2 1322 aa36.68■■■■□ 3.46
CSNK1E-205ENST00000405675 FAM161AQ3B820 660 aa36.68■■■■□ 3.46
CSNK1E-205ENST00000405675 COL22A1Q8NFW1 1626 aaPredicted RBP36.68■■■■□ 3.46
CSNK1E-205ENST00000405675 SLC4A2P04920 1241 aa36.66■■■■□ 3.46
CSNK1E-205ENST00000405675 BABAM1Q9NWV8 329 aa36.65■■■■□ 3.46
CSNK1E-205ENST00000405675 AKAP4Q5JQC9 854 aa36.64■■■■□ 3.46
CSNK1E-205ENST00000405675 TOM1L2Q6ZVM7 507 aa36.64■■■■□ 3.46
CSNK1E-205ENST00000405675 C1orf115Q9H7X2 142 aa36.64■■■■□ 3.46
CSNK1E-205ENST00000405675 STRN4Q9NRL3 753 aa36.64■■■■□ 3.46
CSNK1E-205ENST00000405675 TATP17735 454 aaPredicted RBP36.63■■■■□ 3.45
CSNK1E-205ENST00000405675 MEGF6O75095 1541 aa36.63■■■■□ 3.45
CSNK1E-205ENST00000405675 ANP32AP39687 249 aaKnown RBP36.62■■■■□ 3.45
CSNK1E-205ENST00000405675 EVA1CP58658 441 aa36.62■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms